FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SHEON (Glutamate 5-kinase OS=Shewanella oneidensis GN=proB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20
Identity = 73/229 (31.88%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L  Q+  L   G E++L +SGA+  GR+ L+Y  L          P    + +  AAVGQS L+  +  LFS   +   QLL+T +D  D +      DT+ +LL   +IPI NENDAV+T +           DND+                 +D +GL+   P + PN+KLI    +      +  G   S +G GGM+ K+         GI VVI SG   D I
Sbjct:   35 LARQMAALMRSGVEVVLCTSGAIAAGREHLQYPAL----------PDTMANKQLLAAVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLNARDTLNALLANNIIPIINENDAVATNEIK-------VGDNDNLSARAALLCDADLLILLTDQKGLFDADPRTNPNAKLISQVEKIDDSLRLLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASGHHPDVI 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SALPB (Glutamate 5-kinase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=proB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GL++  P S P ++LI              GD  S +G GGM+ K+         GI  +I SG
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSIAGDSVSGLGIGGMSTKLQAADVACRAGIDTIIASG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_NEIMB (Glutamate 5-kinase OS=Neisseria meningitidis serogroup B GN=proB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20
Identity = 71/234 (30.34%), Postives = 106/234 (45.30%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            G++  +  QL  L+  G E++LVSSGAV  G   L ++K          +P    D +A AAVGQ  LM  Y    S   + S+Q+L++ +DF D+   +     +  LL  R +PI NEND VS  +           DND+                 +D++GLY+G P S P++  +       H+  E+  G  S  G GGM  K+         G+PV I S    D++
Sbjct:   25 GKIQTITCQLAALHHAGHELVLVSSGAVAAGFGALGFKK----------RPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELK-------IGDNDTLSAQVAAMIQADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIKAATIAAESGVPVYICSSLKPDAL 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_MYXXD (Glutamate 5-kinase OS=Myxococcus xanthus (strain DK 1622) GN=proB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20
Identity = 71/215 (33.02%), Postives = 105/215 (48.84%), Query Frame = 2
Query:   44 SQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK-ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQA-EITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +QG E+++VSSGA+ +G +RL            L     ++ GK ACAAVGQS L+  Y+  F+      +Q+L+T  D ++      +  T++ LL   V+P+ NEND VS  +         F DND+                 SDVEGLY+G P  +  ++L+ T ++   +   +  G  S VG GGM+ KV         GI  VITSG
Sbjct:   49 AQGRELVVVSSGAIALGVERL-----------GLPSRPRDIPGKQACAAVGQSRLVQAYEEAFAAHGKAVAQVLLTHEDVQERRRYLNVKHTLERLLTAGVVPVINENDTVSVDELK-------FGDNDTLAGLVAGVVDADALVLLSDVEGLYTGDPRRDAGAELLATVMQVTPEVLALATGTSSGVGTGGMSTKVRAAARASDSGIHCVITSG 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_LACLA (Glutamate 5-kinase OS=Lactococcus lactis subsp. lactis GN=proB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20
Identity = 69/219 (31.51%), Postives = 106/219 (48.40%), Query Frame = 2
Query:   29 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L +LN++G+E+ILV+SGA+GVG   L   K          +P+   D +A A++GQ  LM+LY  +F +     SQLL+T         R+   + + +LL L +IPI NENDA++  +  ++     F DND                  SD++GL+   PS  +   I   I        ++  G  SR G GGMT+K+         G  +V+T+G
Sbjct:   42 LSDLNNKGYEVILVTSGAIGVGLNVLGIDK----------RPKGIADQQALASIGQVELMSLYTQMFRRYSQKVSQLLLTRDVTDFPTSRENAENALNALLGLGIIPIINENDAIAVDEMDHQTK---FGDNDKLGAIVSKLVNADLLIMLSDIDGLFDKNPSIYDDAKIFNEIHEITDELRQMAGGAGSRFGTGGMTSKLAAAQILFENGQEMVLTNG 247          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURVG (Glutamate 5-kinase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=proB PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20
Identity = 71/230 (30.87%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL++  P  +PN+ L+      A     +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWNK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHHIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQTGLFTADPRKDPNATLVAEASAGAPELESMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGREAD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SERMA (Glutamate 5-kinase OS=Serratia marcescens GN=proB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D +GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADLEDRERFLNARDTMTALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQQGLYTADPRNNPQAELIREVHGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_NOVAD (Glutamate 5-kinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=proB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 68/226 (30.09%), Postives = 109/226 (48.23%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTY--IRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L AL+ ++  + + G E+I+VSSGA+ +G ++L   K    SL+D Q         A A+VGQ +L  L+  L +Q  +T++Q+L+T  D  D      +  T+ +LL    +P+ NEND+V+T++         F DND                  SD++GLY   P +P +  I     +  +  A  T G  S +G GGMT+K+         G+ + I  G
Sbjct:   39 LSALVSEIAAMRAAGQEVIVVSSGAIALGARKLGLAKGGRGSLSDAQ---------AAASVGQIALAGLWAELLAQHGLTAAQILLTLEDLEDRRRYLNVTATLGTLLAACAVPVINENDSVATQEIR-------FGDNDRLAARVGQAAGASGVLLLSDIDGLYDRDPRQPGATRIPVVKGVTPEIHAMATGGSSSGLGSGGMTSKLQAAEIAELAGMALAIIDG 248          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_NITEU (Glutamate 5-kinase OS=Nitrosomonas europaea GN=proB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 75/230 (32.61%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            LG    Q+  L   G E++LVSSGAV  G QRL + K+  ++L +LQ         A AAVGQ  L   Y   FS+ ++ ++Q+L+T  D            T+ +LL+L +IP+ NEND V + +         F DND+                 +D EGL++G P    +++LI     +    E+  G   S +GRGGM +KV         G   VI SG A D
Sbjct:   33 LGGWAGQISRLRQMGKEVVLVSSGAVAEGMQRLGW-KMRPAALYELQ---------AAAAVGQMGLAQAYADCFSEYELQTAQILLTHDDLSSRKRYLNARSTILTLLNLGIIPVINENDTVVSDEIR-------FGDNDNLAALVANLIEAEVLVILTDQEGLFTGDPRKNTDARLIPEVSVSDPDIEVMAGGAGSSIGRGGMQSKVMAARRAARSGAHTVIASGRAKD 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CORJK (Glutamate 5-kinase OS=Corynebacterium jeikeium (strain K411) GN=proB PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 71/234 (30.34%), Postives = 109/234 (46.58%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITS----GFAMDS 694
            ++  + + L+   ++  ++I+VSSGAV  G   L             Q+P +    +A A+VGQ  L   +   F++   T  Q+L+T SD  + D  +    T+  L  L+ +PI NEND V+T       S   F DND                  SDV+GLY   P+EP ++ I     +K    +  GD  R+G GGM AKV+        G+PV++TS    G A+D+
Sbjct:   37 QIDMIADALEARMARDTDLIVVSSGAVACGMGPLELA----------QRPTDLATKQAAASVGQVLLAQEWARSFARYGRTIGQVLLTASDAAERDRARNAQRTIDRLRQLKAVPIVNENDTVAT-------SEMRFGDNDRLAALVSHLAFADACVLLSDVDGLYDRNPAEPGAQFIAEVKSSKDLKGVAAGDGGRLGTGGMAAKVSAARLASRAGVPVLLTSTENIGAALDT 253          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_SHEON3.393e-2031.88Glutamate 5-kinase OS=Shewanella oneidensis GN=pro... [more]
PROB_SALPB3.393e-2030.49Glutamate 5-kinase OS=Salmonella paratyphi B (stra... [more]
PROB_NEIMB4.431e-2030.34Glutamate 5-kinase OS=Neisseria meningitidis serog... [more]
PROB_MYXXD4.431e-2033.02Glutamate 5-kinase OS=Myxococcus xanthus (strain D... [more]
PROB_LACLA4.431e-2031.51Glutamate 5-kinase OS=Lactococcus lactis subsp. la... [more]
PROB_BURVG4.431e-2030.87Glutamate 5-kinase OS=Burkholderia vietnamiensis (... [more]
PROB_SERMA5.787e-2030.94Glutamate 5-kinase OS=Serratia marcescens GN=proB ... [more]
PROB_NOVAD5.787e-2030.09Glutamate 5-kinase OS=Novosphingobium aromaticivor... [more]
PROB_NITEU5.787e-2032.61Glutamate 5-kinase OS=Nitrosomonas europaea GN=pro... [more]
PROB_CORJK5.787e-2030.34Glutamate 5-kinase OS=Corynebacterium jeikeium (st... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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