FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CLOPE (Glutamate 5-kinase OS=Clostridium perfringens GN=proB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 68/229 (29.69%), Postives = 108/229 (47.16%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGI--FWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            R+  L   + ++ + G E++LVSSGA+GVG  +LR  K          KP+   + +A AAVGQ +LM +Y+  F +     +Q+L+T     +E  +  + +T  +LL+  +IPI NENDA+S      ++   I  F DND+                 SD++G Y   P  +E +  L   Y       E   G  S  G GGM  K++        GI +++ +G
Sbjct:   31 RIEKLSRVISDICNMGKEVVLVSSGAIGVGVGKLRLEK----------KPETIREKQAVAAVGQCALMHIYNKFFGEYSHVVAQVLLTRDVLENERMKNNVCNTFDTLLEKGIIPIVNENDAIS-----IDEIQNILNFGDNDNLSAIVSTLVNADTLIILSDIDGFYDSDPRTNEDSKMLKEVYEITPEIEECAGGAGSNRGTGGMVTKLSAAKVATSNGIDMILANG 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURCJ (Glutamate 5-kinase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=proB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 71/230 (30.87%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL++  P  +PN+ L+      A     +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQSGLFTADPRKDPNATLVGEANAGAPELEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGREAD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURCH (Glutamate 5-kinase OS=Burkholderia cenocepacia (strain HI2424) GN=proB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 71/230 (30.87%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL++  P  +PN+ L+      A     +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQSGLFTADPRKDPNATLVGEANAGAPELEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGREAD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURCC (Glutamate 5-kinase OS=Burkholderia cenocepacia (strain MC0-3) GN=proB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 71/230 (30.87%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL++  P  +PN+ L+      A     +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQSGLFTADPRKDPNATLVGEANAGAPELEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGREAD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURCA (Glutamate 5-kinase OS=Burkholderia cenocepacia (strain AU 1054) GN=proB PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 71/230 (30.87%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL++  P  +PN+ L+      A     +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHGIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQSGLFTADPRKDPNATLVGEANAGAPELEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGREAD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERE8 (Glutamate 5-kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=proB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQAGLYTADPRNNPQAELIREVHGIDDALRGIAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SYMTH (Glutamate 5-kinase OS=Symbiobacterium thermophilum GN=proB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 76/227 (33.48%), Postives = 102/227 (44.93%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            GR+ AL+ Q+ +L+ +G ++ILV+SGAVG G  RL         LA+  +P      +A AAVGQ  LM  Y+ LFS+  +   Q+L+T  D  D D R      ++ LL   VIPI NEND V++ +           DND+                 SDV+GLY   P   P    I              G  S  G GGM  KV         GIP+V+  G
Sbjct:   30 GRMEALVRQIADLHFEGRQVILVTSGAVGAGLGRL--------GLAE--RPAEVAAKQALAAVGQGLLMQRYEGLFSEYGLVVGQVLLTREDLEDPDRRASSAQVMERLLAWGVIPIVNENDTVTSEEIR-------VGDNDTLSARVAALVRADLLILLSDVDGLYPADPHLHPGLSPIPWVSPDDDLDRFAGGPGSANGTGGMVTKVAAARICAEHGIPMVLACG 239          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SHIFL (Glutamate 5-kinase OS=Shigella flexneri GN=proB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 67/223 (30.04%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P   P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRRNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SERP5 (Glutamate 5-kinase OS=Serratia proteamaculans (strain 568) GN=proB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D +GLY+  P + P ++LI              GD  S +G GGM  K+         GI V+I +G
Sbjct:   31 LVRQCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADLEDRERFLNARDTMTALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQQGLYTADPRNNPQAELIREVHGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDVIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_GEOSF (Glutamate 5-kinase OS=Geobacter sp. (strain FRC-32) GN=proB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 70/228 (30.70%), Postives = 104/228 (45.61%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRA--KHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            R+  L  ++     QG E++LVSSGAV  GR  L         L+D  +P+     +A AA+GQS LM  Y+  F+   +  +QLL+T  D            T+ +LL+  +IPI NEND V   +         F DND+                 +D++G Y+  P + P ++LIH  +R+  K       G  S VG GGM  K+         GIP ++ +G
Sbjct:   32 RIKGLAAEMAHFRQQGVEVVLVSSGAVAAGRLEL--------GLSD--RPRTIPQKQAAAAIGQSKLMRAYEEEFACHGIKVAQLLLTRDDLASRPRFLNARATIDTLLECGIIPIINENDTVVVEEIK-------FGDNDNLSALVTNLVEAQLLVILTDIDGFYTADPRTNPEARLIH-LVRSITKETERAAGGSGSSVGTGGMATKIAAAKKVGKSGIPTIMVNG 241          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_CLOPE5.787e-2029.69Glutamate 5-kinase OS=Clostridium perfringens GN=p... [more]
PROB_BURCJ5.787e-2030.87Glutamate 5-kinase OS=Burkholderia cepacia (strain... [more]
PROB_BURCH5.787e-2030.87Glutamate 5-kinase OS=Burkholderia cenocepacia (st... [more]
PROB_BURCC5.787e-2030.87Glutamate 5-kinase OS=Burkholderia cenocepacia (st... [more]
PROB_BURCA5.787e-2030.87Glutamate 5-kinase OS=Burkholderia cenocepacia (st... [more]
PROB_YERE87.558e-2030.94Glutamate 5-kinase OS=Yersinia enterocolitica sero... [more]
PROB_SYMTH7.558e-2033.48Glutamate 5-kinase OS=Symbiobacterium thermophilum... [more]
PROB_SHIFL7.558e-2030.04Glutamate 5-kinase OS=Shigella flexneri GN=proB PE... [more]
PROB_SERP57.558e-2030.49Glutamate 5-kinase OS=Serratia proteamaculans (str... [more]
PROB_GEOSF7.558e-2030.70Glutamate 5-kinase OS=Geobacter sp. (strain FRC-32... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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