FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CHRVO (Glutamate 5-kinase OS=Chromobacterium violaceum GN=proB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20
Identity = 71/221 (32.13%), Postives = 102/221 (46.15%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            E++ EL  +G +++LVSSGA+  G QRL +            +P+   + +A AAVGQ  L   Y++ F    + ++Q+L+T  D  D         T+ SLL+L V+PI NEND V+T       S   F DND+                 +D  GLYS  P   P+++ IH       + E +  G  S VG GGM  K+         G   VI SG
Sbjct:   37 EEVAELKRRGKQVVLVSSGAIAEGCQRLGWTV----------RPKGVHELQAAAAVGQMGLCQAYESAFRSFGLRTAQILLTHEDLADRTRYLNARSTLTSLLNLNVVPIINENDTVAT-------SEIRFGDNDTLGALVTNLIEADALVILTDQRGLYSADPRKHPDAEFIHQAEAGDERLEDMAGGAGSSVGTGGMITKILAAKRAARSGAATVIASG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERPY (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERPS (Glutamate 5-kinase OS=Yersinia pseudotuberculosis GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERPP (Glutamate 5-kinase OS=Yersinia pestis (strain Pestoides F) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERPN (Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERPG (Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERPE (Glutamate 5-kinase OS=Yersinia pestis GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERPB (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_YERP3 (Glutamate 5-kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 69/223 (30.94%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + +++G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D  GLY+  P + P ++LI              GD  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAKGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADLEDRERFLNARDTMNALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILASADKLLLLTDQAGLYTADPRNNPEAELIREVHGIDDVLRGMAGDSVSGLGTGGMATKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_NEIG2 (Glutamate 5-kinase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 71/234 (30.34%), Postives = 105/234 (44.87%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            G++  +  QL  L+  G E++LVSSGAV  G   L ++K          +P    D +A AAVGQ  LM  Y    S   + S+Q+L++ +DF D+   +     +  LL  R IPI NEND VS  +           DND+                 +D++ LY+G P S P++  +       H+  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   25 GKIQTITRQLAALHRAGHELVLVSSGAVAAGFGALGFKK----------RPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGALSVLLQRRAIPIINENDTVSVEELK-------IGDNDTLSAQVAAMIQADLLVLLTDIDDLYTGNPNSNPDAVRLDKIEHINHEIIKMAGGSGSANGTGGMLTKIKAATIAAESGVPVYICSSLKPDSL 241          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_CHRVO7.558e-2032.13Glutamate 5-kinase OS=Chromobacterium violaceum GN... [more]
PROB_YERPY9.871e-2030.94Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERPS9.871e-2030.94Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERPP9.871e-2030.94Glutamate 5-kinase OS=Yersinia pestis (strain Pest... [more]
PROB_YERPN9.871e-2030.94Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua ... [more]
PROB_YERPG9.871e-2030.94Glutamate 5-kinase OS=Yersinia pestis bv. Antiqua ... [more]
PROB_YERPE9.871e-2030.94Glutamate 5-kinase OS=Yersinia pestis GN=proB PE=3... [more]
PROB_YERPB9.871e-2030.94Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_YERP39.871e-2030.94Glutamate 5-kinase OS=Yersinia pseudotuberculosis ... [more]
PROB_NEIG29.871e-2030.34Glutamate 5-kinase OS=Neisseria gonorrhoeae (strai... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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