FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_LEIXX (Glutamate 5-kinase OS=Leifsonia xyli subsp. xyli GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 70/228 (30.70%), Postives = 109/228 (47.81%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQ---AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            G++G L++ L E + +G +++LVSSGA+  G   + Y       LA  ++P++    +A AAVGQ+ L+  Y     +  + + Q+L+T  D  +   R      ++ LLDLR++PI NEND V+T +         F DND                  SDV+ LY+ PP E  ++ I  ++    Q    EI     S VG GG   KV+        G  VV+T+
Sbjct:   30 GQIGPLVDALAEAHGRGSQVVLVSSGAIATG---IPY-------LALTERPKDLATQQAAAAVGQNVLIYRYQDSLDRYGIVAGQVLLTARDVENPTHRSNAKRAMERLLDLRILPIVNENDTVATHEIR-------FGDNDRLAALVAKLVEADLLVLLSDVDALYTKPPQESGAERI-AHVGWNDQLEGVEIGSAGPSGVGTGGALTKVSAARQAAEHGTAVVLTA 239          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_HAEIG (Glutamate 5-kinase OS=Haemophilus influenzae (strain PittGG) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 67/223 (30.04%), Postives = 104/223 (46.64%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            ++ Q+ +L++ GF I++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD  +IP+ NENDAV+T +           DND+                 +D +GL+ S P     +KLI    +   H   I  G  + +G GGM  K+         GI  +I  G
Sbjct:   30 IVRQIAQLHNDGFRIVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQAWEKLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNHIIPVINENDAVATAEIK-------VGDNDNLSALVAILVQAEQLYLLTDQQGLFDSDPRKNSEAKLIPVVEQITDHIRSIAGGSGTNLGTGGMMTKIIAADVATRSGIETIIAPG 235          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURP8 (Glutamate 5-kinase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=proB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 70/230 (30.43%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L  QG E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ FS+  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D +GL++  P  +P + L+        + E +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALREQGKEVVLVSSGAIAEGMQRLGWTR----------RPREIDELQAAAAVGQMGLAQVYESRFSEHSIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQQGLFTADPRKDPAATLVQQADAGTPELEAMAGGAGSSIGRGGMLTKILAAKRAAHSGANTVIASGREAD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SALAR (Glutamate 5-kinase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=proB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19
Identity = 70/223 (31.39%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      D +++LLD  ++PI NENDAV+T     E   G   DND+                 +D +GL++  P S P ++LI              GD  S +G GGM+ K+         GI  +I SG
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PVTIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDMLRALLDNHIVPIINENDAVAT----VEIKVG---DNDNLSALAAILAGADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIASG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_KLEP7 (Glutamate 5-kinase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=proB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19
Identity = 69/229 (30.13%), Postives = 106/229 (46.29%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D  GL++  P S P ++LI              GD  S +G GGM  K+         GI  +I +G   D I
Sbjct:   31 LVRQCAQLHAMGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNSIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQPGLFTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAGNRPDVI 242          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_KLEP3 (Glutamate 5-kinase OS=Klebsiella pneumoniae (strain 342) GN=proB PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19
Identity = 69/229 (30.13%), Postives = 106/229 (46.29%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D  GL++  P S P ++LI              GD  S +G GGM  K+         GI  +I +G   D I
Sbjct:   31 LVRQCAQLHAMGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNSIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQPGLFTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAGNRPDVI 242          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_VIBCH (Glutamate 5-kinase OS=Vibrio cholerae GN=proB PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19
Identity = 66/229 (28.82%), Postives = 110/229 (48.03%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L  Q  EL  QG  +++V+SGA+  GR+ L Y  L N+  +           +  AAVGQS L+ ++++LF+   +   Q+L+T +D  D +      DT+ +L++  ++P+ NENDAV+T +           DND+                 +D +GL++  P  +PN++LI           +I  G  + +G GGM  K+         GI V+I +G A + I
Sbjct:   38 LARQCAELKKQGHSVVIVTSGAIAAGREHLGYPALPNAISSK----------QLLAAVGQSRLIQVWESLFAIYGIKIGQMLLTRADLDDRERFLNARDTINALVENGIVPVVNENDAVATNEIK-------VGDNDNLSALVGILCGADKLLLLTDQKGLFTADPRKDPNAQLIKEVTTIDDTLRKIAGGSGTTLGTGGMATKLQAADIARRAGIEVIIAAGRAPNVI 249          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRPI (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=proB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V   +           DND+                 +DV+GLY+G P S+P +K +        +  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   30 ITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDEVK-------VGDNDTLSAQVAAMVQADLLVLLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSM 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_RALEJ (Glutamate 5-kinase OS=Ralstonia eutropha (strain JMP134) GN=proB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19
Identity = 66/220 (30.00%), Postives = 106/220 (48.18%), Query Frame = 2
Query:   26 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            Q+ +L S G E++LVSSGA+  G QRL +          +++P+   + +A AAVGQ  L  +Y++ F +  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GLY+  P  +PN++ +   +    + E +  G  + +GRGGM  K+         G    I SG
Sbjct:   38 QIAKLRSIGKEVVLVSSGAIAEGMQRLGW----------VRRPREIHELQAAAAVGQMGLAQVYESQFGRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVTDEIK-------FGDNDTLGALVTNLIEGDALVILTDQRGLYTADPRKDPNAEFVDEALAGTPELEQMAGGAGTSIGRGGMLTKILAAKRAAKSGAHTTIASG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_PSYA2 (Glutamate 5-kinase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=proB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19
Identity = 68/229 (29.69%), Postives = 109/229 (47.60%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYS-GPPSEPNSKLIHTYIRAKHQAEITF---GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            +Q+ +L+ QG E++LVSSGAV  G  R+             ++P+     +ACA++GQ  L+  + +   Q  + SSQLL+T  D  +          +  LL+ RV+P+ NEND ++  +         F DND+                 +D EG+++  P   PN+K+I    + +  A+  F   GD  ++GRGGM  K+         G P VI SG A+D +
Sbjct:   52 KQIAKLHKQGIEVLLVSSGAVAEGVVRMNLE----------ERPKKLAALQACASIGQMGLIETWWSALIQHGIQSSQLLLTHDDLSNRSRYLNTTGALTQLLEWRVLPVINENDTITIDEIK-------FGDNDTLGAMAAAMVNADLYIILTDQEGVFTDNPRDNPNAKMIR---QERAMADYLFDIAGDGGKLGRGGMLTKIRAGRLAAMGGCPTVIVSG-AIDDV 259          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_LEIXX9.871e-2030.70Glutamate 5-kinase OS=Leifsonia xyli subsp. xyli G... [more]
PROB_HAEIG9.871e-2030.04Glutamate 5-kinase OS=Haemophilus influenzae (stra... [more]
PROB_BURP89.871e-2030.43Glutamate 5-kinase OS=Burkholderia phymatum (strai... [more]
PROB_SALAR1.289e-1931.39Glutamate 5-kinase OS=Salmonella arizonae (strain ... [more]
PROB_KLEP71.289e-1930.13Glutamate 5-kinase OS=Klebsiella pneumoniae subsp.... [more]
PROB_KLEP31.289e-1930.13Glutamate 5-kinase OS=Klebsiella pneumoniae (strai... [more]
PROB_VIBCH1.684e-1928.82Glutamate 5-kinase OS=Vibrio cholerae GN=proB PE=3... [more]
PROB_STRPI1.684e-1931.00Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_RALEJ1.684e-1930.00Glutamate 5-kinase OS=Ralstonia eutropha (strain J... [more]
PROB_PSYA21.684e-1929.69Glutamate 5-kinase OS=Psychrobacter arcticus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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