FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CLAMS (Glutamate 5-kinase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=proB PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19
Identity = 69/226 (30.53%), Postives = 103/226 (45.58%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            G++  L++ +   +++G E++LVSSGA+  G   LR    ++   ADL   Q      A AAVGQS L+  Y     +  + + Q+L+T  D    D R+     ++ LL LR++P+ NEND V+T +         F DND                  SDV+ LYS PP EP ++ I           +  G   + VG GG   KV         G  V++TS
Sbjct:   30 GQIAPLVDAIAAAHARGAEVVLVSSGAIATGMPFLR----LDDRPADLATQQ------AAAAVGQSVLIFRYQESLDRYGIVAGQVLLTAGDLAAPDHRENAQRAMERLLGLRLLPVVNENDTVATHEIR-------FGDNDRLAALVARLVDADLLLLLSDVDALYSRPPEEPGARRIEHVAFGDELEGVEIGSTGTGVGTGGAVTKVAAARLAAEAGTGVLLTS 238          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRZT (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V   +           DND+                 +DV+GLY+G P S+P +K +        +  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   30 ITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELK-------VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSM 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRZP (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain P1031) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V   +           DND+                 +DV+GLY+G P S+P +K +        +  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   30 ITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELK-------VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSM 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRZJ (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain JJA) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V   +           DND+                 +DV+GLY+G P S+P +K +        +  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   30 ITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELK-------VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSM 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRR6 (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=proB PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V   +           DND+                 +DV+GLY+G P S+P +K +        +  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   30 ITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELK-------VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSM 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRPN (Glutamate 5-kinase OS=Streptococcus pneumoniae GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V   +           DND+                 +DV+GLY+G P S+P +K +        +  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   30 ITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELK-------VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSM 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRP7 (Glutamate 5-kinase OS=Streptococcus pneumoniae (strain 70585) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V   +           DND+                 +DV+GLY+G P S+P +K +        +  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   30 ITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELK-------VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSM 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRP2 (Glutamate 5-kinase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 71/229 (31.00%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +QL  L+  G E+ILVSSGA+  G   L ++K          +P    D +A AAVGQ  L+  Y T      + S+Q+L+T  DF D+   K  +  +  LL+   IPI NEND+V   +           DND+                 +DV+GLY+G P S+P +K +        +  ++  G  S  G GGM  K+         G+PV I S    DS+
Sbjct:   30 ITQQLAMLHEAGHELILVSSGAIAAGFGALGFKK----------RPTKIADKQASAAVGQGLLLEEYTTNLLLRQIVSAQILLTQDDFVDKRRYKNAHQALSVLLNRGAIPIINENDSVVIDELK-------VGDNDTLSAQVAAMVQADLLVFLTDVDGLYTGNPNSDPRAKRLERIETINREIIDMAGGAGSSNGTGGMLTKIKAATIATESGVPVYICSSLKSDSM 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ERWCT (Glutamate 5-kinase OS=Erwinia carotovora subsp. atroseptica GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 67/223 (30.04%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D  GL++  P + P+++LI              GD  S +G GGM+ K+         GI VVI +G
Sbjct:   31 LVRQCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIATKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTMRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILADADKLLLLTDQAGLFTADPRNNPDAELIREVTGINDALRSIAGDSVSGLGTGGMSTKLQAADVACRAGIDVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_DECAR (Glutamate 5-kinase OS=Dechloromonas aromatica (strain RCB) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 70/226 (30.97%), Postives = 106/226 (46.90%), Query Frame = 2
Query:   26 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            Q+  L  Q  E++LVSSGA+  G QRL + K          +P++  + +A AAVGQ  L+ +Y+  F++  + ++Q+L+T  D  D         T+ +LL+L V+PI NEND V T +         F DND+                 +D +GLY+  P  +P++ LI+         E +  G  +R+G GGM  KV         G    I SG   D I
Sbjct:   39 QIAVLRQQDKEVVLVSSGAIACGMQRLGWAK----------RPKSVHELQAAAAVGQMGLVQVYEGAFAKHGLHTAQILLTHDDLADRKRYLNARSTLNTLLELGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEADALIILTDQQGLYTADPRKDPSATLINEATAGDETLEGMAGGAGTRIGTGGMITKVIAAKRAARSGAHTAIASGRETDPI 247          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_CLAMS1.684e-1930.53Glutamate 5-kinase OS=Clavibacter michiganensis su... [more]
PROB_STRZT2.199e-1931.00Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRZP2.199e-1931.00Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRZJ2.199e-1931.00Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRR62.199e-1931.00Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRPN2.199e-1931.00Glutamate 5-kinase OS=Streptococcus pneumoniae GN=... [more]
PROB_STRP72.199e-1931.00Glutamate 5-kinase OS=Streptococcus pneumoniae (st... [more]
PROB_STRP22.199e-1931.00Glutamate 5-kinase OS=Streptococcus pneumoniae ser... [more]
PROB_ERWCT2.199e-1930.04Glutamate 5-kinase OS=Erwinia carotovora subsp. at... [more]
PROB_DECAR2.199e-1930.97Glutamate 5-kinase OS=Dechloromonas aromatica (str... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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