FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CITK8 (Glutamate 5-kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 66/223 (29.60%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GL++  P + P ++LI              GD  S +G GGM  K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRTNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMGTKLQAADVACRAGIDTIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURXL (Glutamate 5-kinase OS=Burkholderia xenovorans (strain LB400) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 69/230 (30.00%), Postives = 110/230 (47.83%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ F++  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D +GL++  P  +P + L+        + E +  G  S +GRGGM  K+         G   VI SG  +D
Sbjct:   32 IGRWAGQIAALRAQGKEVVLVSSGAIAEGMQRLGWTR----------RPREIDELQAAAAVGQMGLAQVYESRFAEHSIQTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALVILTDQQGLFTADPRKDPAATLVQQADAGAPELEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGREVD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BIFA0 (Glutamate 5-kinase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=proB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 69/227 (30.40%), Postives = 102/227 (44.93%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSK---LIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            +L AL+  + ++   G  I+LVSSGA+  G   L +            +P +    +A A+VGQ  LMA Y+  F +  +   QLL+T  D       +    T+  LL+L V+PI NENDA+++ +         F DND                  +DV+ LY+ PPSEP S     +        Q  +  G +S VG GGM  K+         GIP V+T+
Sbjct:   39 KLNALVGAIAQVRMLGGNIVLVSSGAIAAGFGPLGFES----------RPTDVATQQATASVGQGLLMAQYEMAFGRYGIRVGQLLITAEDTMQPRQYRNARRTMAKLLELGVVPIVNENDALASNEIR-------FGDNDRLSALIANMVRADALILLTDVDALYTAPPSEPGSHRIGFVPNITELLDQVRVG-GSESGVGTGGMVTKLEAARMAAVSGIPAVLTA 247          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_VIBHB (Glutamate 5-kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=proB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19
Identity = 69/229 (30.13%), Postives = 106/229 (46.29%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L  Q  EL  QG  +++VSSGA+  GR+ L Y  L N   +           +  AAVGQS L+  +++LF    +   Q+L+T +D  D +      DT+ +L+   +IPI NENDAV+T +           DND+                 +D +GL++  P  +PN++LI           +I  G  + +G GGM  K+         GI V+I +G A + I
Sbjct:   40 LARQCAELKKQGHSVVMVSSGAIAAGREHLGYPALPNEMASK----------QLLAAVGQSRLIQTWESLFGIYGIKIGQMLLTRADLDDRERFLNARDTINALVANDIIPIVNENDAVATNEIK-------VGDNDNLSALVGILCGADKLLLLTDQKGLFTADPRKDPNAELIKEVKTIDDTLRKIAGGSGTTLGTGGMATKLQAADIARRAGIEVIIAAGSAPNVI 251          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SODGM (Glutamate 5-kinase OS=Sodalis glossinidius (strain morsitans) GN=proB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19
Identity = 69/224 (30.80%), Postives = 109/224 (48.66%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQA--EITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q   L++ G  II+V+SGA+  GR+ L Y +L          P      +  AAVGQS L+  ++ LFS  ++   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D  GL+S  P + P+++LI   +   + A  ++  G  S +G GGM  K+         GI VVI +G
Sbjct:   31 LVRQCAPLHAAGHRIIIVTSGAIAAGREYLNYPEL----------PATIASKQLLAAVGQSRLIQFWEQLFSLYNIHIGQMLLTRADMEDRERFLNARDTLRALLDNGIVPVINENDAVATAEIK-------VGDNDNLSALVAILADADKLLLLTDQPGLFSADPRTNPDAELIRE-VEGINDALRKMAGGSVSGLGTGGMETKLQAAEVANRAGIEVVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SHEAM (Glutamate 5-kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=proB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19
Identity = 69/223 (30.94%), Postives = 100/223 (44.84%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L  Q+  L   G E++LV+SGA+  GR+ L Y  L          P    + +  AAVGQS L+  +  LFS   +   QLL+T +D  D +      DT+ +LL   ++PI NENDAV+T +           DND+                 +D +GL+   P  EPN++LI           +  G   S +G GGM  K+         G+ V+I SG
Sbjct:   35 LARQMAGLMKSGVEVVLVTSGAIAAGREHLGYPVL----------PDTMANKQLLAAVGQSQLILAWSQLFSIYGLHVGQLLLTRADLHDRERYLNARDTLNALLAQGIVPIINENDAVATTEIK-------VGDNDNLSARAALLCDADLLMLLTDQKGLFDADPRKEPNARLIPEVEHIDDSLRLLAGGSVSGLGTGGMATKLQAADIARRAGVEVIIASG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_METFK (Glutamate 5-kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=proB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19
Identity = 73/229 (31.88%), Postives = 110/229 (48.03%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQA--EITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            G + A  +Q+  L   G +++LVSSGAV  G QRL ++K          +P    + +A AAVGQ  L+ +Y++ F+   + ++Q+L+T +D  D         T+++LLDL VIPI NEND V T +         F DND+                 +D  GLYS  P   P+++ I  Y  A + A  ++  G  + +G GGM  K+         G   VI SG
Sbjct:   30 GAIAAWADQIARLVKSGRQVVLVSSGAVAEGMQRLGWKK----------RPVAINELQAAAAVGQMGLVQMYESCFASHGLHTAQILLTHADLADRKRYLNARTTLRTLLDLGVIPIINENDTVVTDEIR-------FGDNDTLGSLVANLIEADALVILTDQPGLYSADPRKHPDAQFIQ-YETAGNPALEKMAGGAGTLIGSGGMLTKILAAKRAARSGAHTVIASG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ENTS8 (Glutamate 5-kinase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=proB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19
Identity = 67/223 (30.04%), Postives = 104/223 (46.64%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  + ++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+ +LLD R++P+ NENDAV+T +           DND+                 +D +GL++  P + P ++LI              GD  S +G GGM  K+         GI  VI +G
Sbjct:   31 LVRQCAQQHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLTALLDNRIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRNNPQAELIQDVYGIDDTLRAIAGDSVSGLGTGGMGTKLQAADVAGRAGIETVIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CLAM3 (Glutamate 5-kinase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=proB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19
Identity = 71/235 (30.21%), Postives = 107/235 (45.53%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK----------SRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            G++  L++ +  ++++G E++LVSSGA+  G   LR    ++   ADL   Q      A AAVGQS L+  Y     +  + + Q+L+T  D    D R+     ++ LL LR++PI NEND V+T +         F DND                  SDV+ LY+ PP EP ++ I           + FGD+          + VG GG   KV         G  V++TS
Sbjct:   30 GQIAPLVDAIASVHARGAEVVLVSSGAIATGMPFLR----LDDRPADLATQQ------AAAAVGQSVLIFRYQESLDRYGIVAGQVLLTAGDLAAPDHRENAQRAMERLLGLRLLPIVNENDTVATHEIR-------FGDNDRLAALVARLVDADLLLLLSDVDALYTRPPEEPGARRIE---------HVGFGDELDGVEIGSTGTGVGTGGAVTKVAAARLAAEAGTGVLLTS 238          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_VIBPA (Glutamate 5-kinase OS=Vibrio parahaemolyticus GN=proB PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19
Identity = 69/229 (30.13%), Postives = 106/229 (46.29%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L  Q  EL  QG  +++VSSGA+  GR+ L Y  L N   +           +  AAVGQS L+  +++LF    +   Q+L+T +D  D +      DT+ +L+   +IPI NENDAV+T +           DND+                 +D +GL++  P  +PN++LI           +I  G  + +G GGM  K+         GI V+I +G A + I
Sbjct:   40 LARQCAELKKQGHSVVMVSSGAIAAGREHLGYPALPNEMASK----------QLLAAVGQSRLIQTWESLFGIYGIKIGQMLLTRADLDDRERFLNARDTINALVANDIIPIVNENDAVATSEIK-------VGDNDNLSALVGILCGADKLLLLTDQKGLFTADPRKDPNAELIKEVKTIDDTLRKIAGGSGTTLGTGGMATKLQAADIARRAGIEVIIAAGSAPNVI 251          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_CITK82.199e-1929.60Glutamate 5-kinase OS=Citrobacter koseri (strain A... [more]
PROB_BURXL2.199e-1930.00Glutamate 5-kinase OS=Burkholderia xenovorans (str... [more]
PROB_BIFA02.199e-1930.40Glutamate 5-kinase OS=Bifidobacterium animalis sub... [more]
PROB_VIBHB2.872e-1930.13Glutamate 5-kinase OS=Vibrio harveyi (strain ATCC ... [more]
PROB_SODGM2.872e-1930.80Glutamate 5-kinase OS=Sodalis glossinidius (strain... [more]
PROB_SHEAM2.872e-1930.94Glutamate 5-kinase OS=Shewanella amazonensis (stra... [more]
PROB_METFK2.872e-1931.88Glutamate 5-kinase OS=Methylobacillus flagellatus ... [more]
PROB_ENTS82.872e-1930.04Glutamate 5-kinase OS=Enterobacter sakazakii (stra... [more]
PROB_CLAM32.872e-1930.21Glutamate 5-kinase OS=Clavibacter michiganensis su... [more]
PROB_VIBPA3.751e-1930.13Glutamate 5-kinase OS=Vibrio parahaemolyticus GN=p... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
back to top