FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:155..852. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CLOAB (Glutamate 5-kinase OS=Clostridium acetobutylicum GN=proB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22
Identity = 71/229 (31.00%), Postives = 112/229 (48.91%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            ++ Q+ +L++QG ++ILVSSGA+G G  +LR +          ++P+   + +A AAVGQ  LM  Y+ LF++      Q+L+T  D   +     + +T  +LLD  +IPI NENDA    +         F DND+                 SD++GLY S P    N+ LI T      + + + G   S++G GGM  K+         GI +VI +G   ++I
Sbjct:   38 IVRQIADLHNQGIKVILVSSGAIGAGIGKLRLK----------ERPKTIPEKQAAAAVGQGVLMHTYEKLFAEYGQIVGQILITREDLSSKKRVVNVQNTFSALLDHGIIPIVNENDATVVEEIK-------FGDNDTLSARVASLIKADLLILLSDIDGLYDSNPAVNKNAVLIDTVNEVNEEVKASAGGAGSKLGTGGMATKIRAAEIATENGISMVIANGEKQEAI 249          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_PROMH (Glutamate 5-kinase OS=Proteus mirabilis (strain HI4320) GN=proB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 73/229 (31.88%), Postives = 109/229 (47.60%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L+ Q  + + +G  II+V+SGA+  GR+ L Y  L          P      +  AAVGQS+L+ ++  LF+   +   Q+L+T +D  D +      DT+ +LLD ++IP+ NENDAV+T +           DND+                 +D+EGLY+  P S P++KLI        +     GD  S +G GGM  K+         GI VVI +G   D I
Sbjct:   31 LVRQCAKQHEKGHRIIIVTSGAIAAGREYLNYPDL----------PATIASKQLLAAVGQSALIQVWKQLFAIYGIHIGQMLLTRADIEDRERFLNARDTLHALLDNKIIPVINENDAVATAEIK-------VGDNDNLSALAAILGGADKLLLLTDIEGLYTADPRSNPDAKLIPEVFDINDELRQMAGDSVSGLGTGGMATKLQAATVAGRAGIDVVIAAGVKPDVI 242          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CARHZ (Glutamate 5-kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=proB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 2
Query:   20 LEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVI 670
            + +  +L + GFE+I+VSSGA+  G  RL          A  +KP+N  + +ACAAVGQ  LM LY+  FS+  V ++Q+L+T  D            T  +LL+  V+P+ NEND V+  +         F DND+                 SD++GLY+  P    N++ +   +    + E +  G  + VG GGM  K+         GIP+VI
Sbjct:   37 VRECADLKNAGFEVIIVSSGAIAAGMGRL----------ALPEKPKNLPEKQACAAVGQGVLMHLYEKFFSEYQVIAAQVLLTGEDLAVRKRFLNAKHTFSALLNYGVVPVVNENDTVAVEEIR-------FGDNDTLSARVAVLVEADLLVLLSDIDGLYTADPRKNSNARFLPEVLEINEEIEQLAGGSGTAVGTGGMETKIEAAKIAVNAGIPMVI 238          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB2_BACLD (Glutamate 5-kinase 2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=proB2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 73/220 (33.18%), Postives = 106/220 (48.18%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGI 658
            +L  L+EQ+  L  +G E++LVSSGAV  G     YRKL       + +P    + +A A+VGQ  L+  Y  LF      +SQ+L+T SDF DE     + +T+  LL   +IPI NEND V+  +         F DND+                 SD++GLY + P   P++ L+        + E + GD  S VG GGM +K++        GI
Sbjct:   28 KLEKLVEQIVRLKDEGHEVLLVSSGAVAAG-----YRKL-----GFINRPDTLPEKQASASVGQGLLIEAYSKLFLSHGYIASQILITKSDFSDEKRYNNVRNTMNVLLKRGIIPIINENDTVTVNRLK-------FGDNDTLSAKVAGLIDADLLTILSDIDGLYDANPRKTPDAALVQEVTEITPEIEASAGDAGSEVGTGGMKSKLDAFKITMASGI 230          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SYNP6 (Glutamate 5-kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=proB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 76/233 (32.62%), Postives = 107/233 (45.92%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEI--TFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            +  L+E + +L  QG+ ++LVSSGAVGVG  RL  R           +P      +A AAVGQ  LM  YD LF+ L    +Q+L+T  D          Y T Q L +L V+PI NEND V+  +         F DND+                 +DV+ LY+  P  +PN+K I T +    + E     G  SR G GGM  K+          +  VIT G + +++
Sbjct:   30 IAGLVEVICQLRRQGYNVVLVSSGAVGVGCTRLGLR----------DRPSRIAQRQAIAAVGQGRLMRTYDDLFTTLGQPIAQVLLTRGDLAQRQRYINAYQTFQELFELGVVPIVNENDTVAVEELK-------FGDNDTLSALVASLVEAQWLFLLTDVDRLYTADPRQDPNAKPI-TIVHDLSELESIQAGGQGSRWGTGGMATKLTAAKIATQASVRTVITQGRSPENL 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SYNE7 (Glutamate 5-kinase OS=Synechococcus elongatus (strain PCC 7942) GN=proB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 76/233 (32.62%), Postives = 107/233 (45.92%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEI--TFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            +  L+E + +L  QG+ ++LVSSGAVGVG  RL  R           +P      +A AAVGQ  LM  YD LF+ L    +Q+L+T  D          Y T Q L +L V+PI NEND V+  +         F DND+                 +DV+ LY+  P  +PN+K I T +    + E     G  SR G GGM  K+          +  VIT G + +++
Sbjct:   27 IAGLVEVICQLRRQGYNVVLVSSGAVGVGCTRLGLR----------DRPSRIAQRQAIAAVGQGRLMRTYDDLFTTLGQPIAQVLLTRGDLAQRQRYINAYQTFQELFELGVVPIVNENDTVAVEELK-------FGDNDTLSALVASLVEAQWLFLLTDVDRLYTADPRQDPNAKPI-TIVHDLSELESIQAGGQGSRWGTGGMATKLTAAKIATQASVRTVITQGRSPENL 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_GEOSM (Glutamate 5-kinase OS=Geobacter sp. (strain M21) GN=proB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 74/228 (32.46%), Postives = 108/228 (47.37%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEI-TFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            G L  L  Q+ EL+ QG E+++VSSGAV  GRQ L         L D  +P+     +A AAVGQS LM  Y+  FS  D+  +Q+L+T  D  +    +    T+ +LL   +IP+ NEND V   +         F DND+                 +D++GLY+  P ++PN+ LIH       + E    G  + VG GGM  K+         G+  +I +G
Sbjct:   31 GFLDGLAAQVAELSGQGTEVVIVSSGAVAAGRQAL--------GLPD--RPRTLPQKQAAAAVGQSRLMRAYEEAFSSYDLKVAQILLTRDDLANRRRFQNARGTLDTLLACGIIPVINENDTVVVDELK-------FGDNDNLSALVTNLVEAQLLLIMTDIDGLYTADPRTDPNATLIHQVGAVTRELERGAGGSGTSVGTGGMATKLAAAKKVVKSGVAAIIFAG 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CLOTE (Glutamate 5-kinase OS=Clostridium tetani GN=proB PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 72/223 (32.29%), Postives = 107/223 (47.98%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ QL +L+++G+ +ILVSSGA+G G  +L             +KP++  + +A AAVGQ  L+  Y+ +F++   T  Q+L+T  D  DE       +T  +LLD RVIPI NENDAV   +           DND+                 SD+EGLYS  P   N   +  ++    K       G  + +G GGM  K+         GIP++I +G
Sbjct:   39 LVRQLVDLHNRGYNVILVSSGAIGAGVGKLGLS----------EKPKSIPEKQAAAAVGQGILLHTYEKIFAEYGKTIGQILLTKEDMIDEVRSCNATNTFNALLDKRVIPIINENDAVVVDEIK-------VGDNDTLSAFVSKLVKADLLILMSDIEGLYSCDPRINNDAELINFVEKITKDIISCAGGAGTDLGTGGMATKIKAAKIATSAGIPMLIVNG 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ACAM1 (Glutamate 5-kinase OS=Acaryochloris marina (strain MBIC 11017) GN=proB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.055e-21
Identity = 79/234 (33.76%), Postives = 114/234 (48.72%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITF---GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            + +L+E L +L  +G ++ILVSSGAVG+G  RL         LA+  +P+     +A AAVGQ  LM +YD  F+ L    +Q+L+T  D  D        +T+Q LL L VIPI NEND V+       D    F DND+                 +DV+ LYS  P  +P+++ I T  R +  A +        S+ G GGM  K++        G+  VIT G   ++I
Sbjct:   27 IASLVEVLSQLRQEGNQVILVSSGAVGIGCARL--------GLAE--RPKAIALKQAVAAVGQGRLMRIYDDFFTSLQQPIAQVLLTRGDLADRSRYINASNTLQELLKLGVIPIVNENDTVAV------DELLRFGDNDTLSALVAGLVQADWLFILTDVDRLYSADPRIQPDAQPIVTVERMEELAALNVNAGAQGSQWGTGGMATKISAAAIATNAGVRTVITQGKTPENI 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ANAVT (Glutamate 5-kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=proB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 78/228 (34.21%), Postives = 108/228 (47.37%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEI---TFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +  L E L  L  QG ++ILVSSGAVGVG  RL             ++P+     +A AAVGQ  LM +YD LF+ L    +Q+L+T SD         +Y+T + LL L VIP+ NEND V+  +         F DND+                 +DV+ LYS  P S P+++ I      K  A++   T    S+ G GGM  K++        G+  VIT G
Sbjct:   27 IATLAETLSYLRQQGNQVILVSSGAVGVGCARLGLT----------ERPKAIALKQAVAAVGQGRLMRVYDDLFTTLQQPIAQVLLTRSDLVQRSRYLNVYNTFRELLALGVIPVVNENDTVAVDELK-------FGDNDTLSALVASLVEADWLFLLTDVDRLYSADPRSVPDARPISLVTSIKELADLQVQTGSQGSQWGTGGMMTKISAARIAIAAGVRTVITQG 237          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_CLOAB2.125e-2231.00Glutamate 5-kinase OS=Clostridium acetobutylicum G... [more]
PROB_PROMH8.075e-2231.88Glutamate 5-kinase OS=Proteus mirabilis (strain HI... [more]
PROB_CARHZ8.075e-2231.51Glutamate 5-kinase OS=Carboxydothermus hydrogenofo... [more]
PROB2_BACLD8.075e-2233.18Glutamate 5-kinase 2 OS=Bacillus licheniformis (st... [more]
PROB_SYNP61.055e-2132.62Glutamate 5-kinase OS=Synechococcus sp. (strain AT... [more]
PROB_SYNE71.055e-2132.62Glutamate 5-kinase OS=Synechococcus elongatus (str... [more]
PROB_GEOSM1.055e-2132.46Glutamate 5-kinase OS=Geobacter sp. (strain M21) G... [more]
PROB_CLOTE1.055e-2132.29Glutamate 5-kinase OS=Clostridium tetani GN=proB P... [more]
PROB_ACAM11.055e-2133.76Glutamate 5-kinase OS=Acaryochloris marina (strain... [more]
PROB_ANAVT1.377e-2134.21Glutamate 5-kinase OS=Anabaena variabilis (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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