FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ANASP (Glutamate 5-kinase OS=Anabaena sp. (strain PCC 7120) GN=proB PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 78/228 (34.21%), Postives = 107/228 (46.93%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEI---TFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +  L E L  L  QG  +ILVSSGAVGVG  RL             ++P+     +A AAVGQ  LM +YD LF+ L    +Q+L+T SD         +Y+T + LL L VIP+ NEND V+  +         F DND+                 +DV+ LYS  P S P+++ I      K  A++   T    S+ G GGM  K++        G+  VIT G
Sbjct:   36 IATLAETLSHLRQQGNRVILVSSGAVGVGCARLGLT----------ERPKAIALKQAVAAVGQGRLMRVYDDLFTTLQQPIAQVLLTRSDLVQRSRYLNVYNTFRELLALGVIPVVNENDTVAVDELK-------FGDNDTLSALVASLVEADWLFLLTDVDRLYSADPRSVPDARPISLVTSIKELADLQVQTGSQGSQWGTGGMMTKISAARIAIAAGVRTVITQG 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_MANSM (Glutamate 5-kinase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=proB PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21
Identity = 69/223 (30.94%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            ++ QL +L+ +G+ +++V+SGA+  GR  L + KL          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD R+IP+ NENDAV+T +           DND+                 +D +GL+ S P   P +KLI        H   I  G  + +G GGM+ K+         GI  +I  G
Sbjct:   35 IVRQLAQLHQEGYRLVIVTSGAMAAGRHYLNHPKL----------PPTIASKQLLAAVGQSQLIQTWEQLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNRIIPVVNENDAVATAEIK-------VGDNDNLSALVAILVQAEQLYLLTDQQGLFDSDPRKNPQAKLIPVVNEITDHIRSIAGGSGTTLGTGGMSTKITAADIATRSGIETIIAPG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_GLOVI (Glutamate 5-kinase OS=Gloeobacter violaceus GN=proB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 75/225 (33.33%), Postives = 101/225 (44.89%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            LG L E L  L   G  IILVSSGAVGVG  RL  +          ++P      +A AAVGQ  LM++YD LF  L    +Q+L+T  D  D        +T+  L  L  +PI NEND V+T +         F DND+                 +DV GLYS  P  +P ++L+        +   +   +S  G GGM +K+         G+  VIT G
Sbjct:   26 LGGLAETLTRLRRAGHRIILVSSGAVGVGCARLGLK----------ERPATVAGKQAAAAVGQGLLMSMYDRLFGALGQPVAQVLLTRQDLMDRVRYLNARETLSELWRLGTVPIVNENDTVATDELR-------FGDNDALSALVAGLVEAQWLVLLTDVAGLYSANPRLDPQARLLSEVTEISEELLQSARGRSLWGSGGMASKLEAARIAASAGVATVITEG 233          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_GEOBB (Glutamate 5-kinase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=proB PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 73/226 (32.30%), Postives = 107/226 (47.35%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEI-TFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L  L  Q+ EL+ QG E+++VSSGAV  GRQ L         L D  +P+     +A AAVGQS LM  Y+  FS  D+  +Q+L+T  D  +    +    T+ +LL   +IP+ NEND V   +         F DND+                 +D++GLY+  P ++PN+ LIH       + E    G  + VG GGM  K+         G+  +I +G
Sbjct:   33 LDGLAAQVAELSGQGTEVVIVSSGAVAAGRQAL--------GLPD--RPRTLPQKQAAAAVGQSRLMRAYEEAFSSYDLKVAQILLTRDDLANRRRFQNARGTLDTLLACGIIPVINENDTVVVDELK-------FGDNDNLSALVTNLVEAQLLLIMTDIDGLYTADPRTDPNATLIHQVGAVTRELERGAGGSGTSVGTGGMATKLAAAKKVVKSGVAAIIFAG 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_HERAR (Glutamate 5-kinase OS=Herminiimonas arsenicoxydans GN=proB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21
Identity = 73/221 (33.03%), Postives = 105/221 (47.51%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            EQ+ +L + G E++LVSSGA+  G QRL + K          +P    + +ACAAVGQ  L  +Y+T F Q  V ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL+S  P  +P++  IH       + E +  G  S +GRGGM  K+         G   VI  G
Sbjct:   37 EQIVQLRALGKEVVLVSSGAIAEGMQRLGFDK----------RPTGVHELQACAAVGQMGLAQIYETSFRQHQVQTAQILLTHADLADRERYLNARSTLFTLLQLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEADALIILTDQRGLFSADPRKDPHATFIHEAQAGDVELEAMAGGAGSSLGRGGMLTKILAAKRAALSGAHTVIAWG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BIFLI (Glutamate 5-kinase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=proB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21
Identity = 70/226 (30.97%), Postives = 107/226 (47.35%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIH---TYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVIT 673
            +L AL   L ++   G  ++LVSSGA+  G   L +           ++P +    +A AAVGQ  LMA Y+T F +  +   Q+L+T  D       + +  T+  LLDL V+PI NEND++++ +         F DND                  +DV+ LY+ PPS+P S+ +      I A    +++ G  S+VG GGM  K+         GIP V+T
Sbjct:   39 KLDALAAALAQIRLMGGRVVLVSSGAIAAGFGPLGFD----------ERPADVATQQATAAVGQGLLMARYETAFGRFGIRVGQILITAEDTIRATQYRNVERTLDRLLDLGVVPIINENDSLASNEIR-------FGDNDRLSALVANLVRAEALVLLTDVDALYTAPPSQPGSRRVEYVPNVIDALGDIQVS-GSGSKVGTGGMVTKLEAARVAAVSGIPTVLT 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_JANMA (Glutamate 5-kinase OS=Janthinobacterium sp. (strain Marseille) GN=proB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 74/220 (33.64%), Postives = 105/220 (47.73%), Query Frame = 2
Query:   26 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            Q+ +L + G E++LVSSGA+  G QRL + K          +P    + +ACAAVGQ  L  +Y+T F Q DV ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL+S  P  +PN+  IH       + E +  G  S +GRGGM  K+         G   VI  G
Sbjct:   38 QIAQLRALGKEVVLVSSGAIVEGMQRLGFDK----------RPVGIHELQACAAVGQMGLAQIYETSFRQHDVRTAQILLTHADLADRERYLNARSTLFTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEADALIILTDQRGLFSADPRKDPNAVFIHEAKAGDLKLEAMAGGAGSSLGRGGMLTKILAAKRAAFSGAHTVIAWG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ACIAD (Glutamate 5-kinase OS=Acinetobacter sp. (strain ADP1) GN=proB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 72/219 (32.88%), Postives = 105/219 (47.95%), Query Frame = 2
Query:   26 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++  +  + ++Q+L+T  D  D        D +Q+L++ RVIP+ NEND VST +         F DND+                 +D +G++ S P S PN+KL+ T            G    +GRGGM  KV         G P +I SG
Sbjct:   44 QIADLHNAGHEIILVSSGAVAEGMVRMK----LTSRPTDLPSLQ------ACAAIGQMGLIHTWSSVLEKHTIQTAQVLLTHDDLADRRRYLNSCDALQNLIEWRVIPVINENDTVSTDEIR-------FGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRSNPNAKLLTTVNAMDDALFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPTLIASG 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_VIBVY (Glutamate 5-kinase OS=Vibrio vulnificus (strain YJ016) GN=proB PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 68/223 (30.49%), Postives = 107/223 (47.98%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L  Q  EL  QG  +++VSSGA+  GR+ L Y  L N+  +           +  AAVGQS L+  +++LF+   +   Q+L+T +D  D +      DT+ +L+D  +IP+ NENDAV+T +           DND+                 +D +GLY+  P  +PN++LI    +      +I  G  + +G GGM  K+         GI V+I +G
Sbjct:   40 LARQCAELKKQGHSVVVVSSGAIAAGREHLGYPALPNAMASK----------QLLAAVGQSQLIQTWESLFALYGIKIGQMLLTRADLEDRERFLNARDTINALVDNGIIPVVNENDAVATSEIK-------VGDNDNLSALVGILCGADKLLLLTDQKGLYTADPRKDPNAELIKEVKVIDDTLRKIAGGSGTTLGTGGMATKLQAADIARRAGIEVIIAAG 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_VIBVU (Glutamate 5-kinase OS=Vibrio vulnificus GN=proB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 68/223 (30.49%), Postives = 107/223 (47.98%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L  Q  EL  QG  +++VSSGA+  GR+ L Y  L N+  +           +  AAVGQS L+  +++LF+   +   Q+L+T +D  D +      DT+ +L+D  +IP+ NENDAV+T +           DND+                 +D +GLY+  P  +PN++LI    +      +I  G  + +G GGM  K+         GI V+I +G
Sbjct:   40 LARQCAELKKQGHSVVVVSSGAIAAGREHLGYPALPNAMASK----------QLLAAVGQSQLIQTWESLFALYGIKIGQMLLTRADLEDRERFLNARDTINALVDNGIIPVVNENDAVATSEIK-------VGDNDNLSALVGILCGADKLLLLTDQKGLYTADPRKDPNAELIKEVKVIDDTLRKIAGGSGTTLGTGGMATKLQAADIARRAGIEVIIAAG 245          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_ANASP1.377e-2134.21Glutamate 5-kinase OS=Anabaena sp. (strain PCC 712... [more]
PROB_MANSM1.799e-2130.94Glutamate 5-kinase OS=Mannheimia succiniciproducen... [more]
PROB_GLOVI2.350e-2133.33Glutamate 5-kinase OS=Gloeobacter violaceus GN=pro... [more]
PROB_GEOBB2.350e-2132.30Glutamate 5-kinase OS=Geobacter bemidjiensis (stra... [more]
PROB_HERAR3.069e-2133.03Glutamate 5-kinase OS=Herminiimonas arsenicoxydans... [more]
PROB_BIFLI3.069e-2130.97Glutamate 5-kinase OS=Bifidobacterium longum subsp... [more]
PROB_JANMA5.234e-2133.64Glutamate 5-kinase OS=Janthinobacterium sp. (strai... [more]
PROB_ACIAD5.234e-2132.88Glutamate 5-kinase OS=Acinetobacter sp. (strain AD... [more]
PROB_VIBVY6.836e-2130.49Glutamate 5-kinase OS=Vibrio vulnificus (strain YJ... [more]
PROB_VIBVU6.836e-2130.49Glutamate 5-kinase OS=Vibrio vulnificus GN=proB PE... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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