FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_PROM4 (Glutamate 5-kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=proB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15
Identity = 63/220 (28.64%), Postives = 99/220 (45.00%), Query Frame = 2
Query:   29 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQ---AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            + E  ++G + I+VSSGAVG+G  +L ++           +P N  D +A A+VGQ  LM LY    +      +Q+L+T SDF   +  +    T++ LLD  V+PI NENDA++  +        ++ DND+                 +D++ LYS  P   N     T +   +Q    E T    +  G GG+  K+         GI V +  G
Sbjct:   32 IAESKARGDQHIIVSSGAVGLGCIQLGFK----------DRPNNINDLQAAASVGQVHLMDLYQEYMATFGYKVAQILITRSDFSSRNCYRNASMTLKRLLDWGVLPIVNENDAIANEEL-------LYGDNDTLSALVSTAINADQLVLLTDIDRLYSTDPKVSNEAKPITDVLNPNQLKDIESTIQKPTNWGTGGIKTKLVAARIATESGIKVHLADG 234          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_DEIGD (Glutamate 5-kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=proB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15
Identity = 70/233 (30.04%), Postives = 102/233 (43.78%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQA-EITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            RL  LL  + E+ + G E++LV+SGAV  G + L +      +LA+ Q           AAVGQ  LM LY ++     +  +Q+L+T  DFRD         T++  L   V+PI NEND V+  +           DND+                 +D  GLY+  P  +P + LI    R   +   +  G  S  G GGM  K+         G PVVI  G A +++
Sbjct:   23 RLVDLLRGIAEVRAAGHEVVLVTSGAVLAGWEALGFPPR-ERTLAEKQ---------LLAAVGQGRLMHLYASIADLYGMPVAQVLLTADDFRDRTRYLNARTTLEGCLTRGVLPIINENDTVAVEQIK-------VGDNDTLSAFVANLVEADLLVILTDAPGLYTADPRIDPTATLIPVVERVTPEVWALAGGAGSHRGTGGMHTKLQAAEIATRAGTPVVIAPGDAENAL 238          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ROSDO (Glutamate 5-kinase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=proB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 64/232 (27.59%), Postives = 105/232 (45.26%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L +L + +  L  QG +++LVSSG++ +GR  L+        L+D   P  +   +A AAVGQ  L   Y+ + +   +T+ Q+L+T  D  +         T++ LL + V+PI NEND ++T +         F DND                  SDV+G YS  P+ +P ++          + E   GD  S + +GGM  K+         G  + IT G  ++ +
Sbjct:   32 LASLAQDVAWLTRQGVKVVLVSSGSIALGRGILK--------LSDTDLPLEQ--AQAAAAVGQIRLARAYEEVLAPHGITTGQVLMTLDDSSNRRRYLNSRATLKQLLSMGVVPIVNENDTIATDEIR-------FGDNDRLAAQIAVTVGADQLVLLSDVDGFYSANPNIDPTAQRFDEIGEITPEIEDMAGDACSGLSKGGMKTKLMAAKIATAAGCRMAITEGVVLNPL 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_NOCFA (Glutamate 5-kinase OS=Nocardia farcinica GN=proB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 58/224 (25.89%), Postives = 98/224 (43.75%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            RL  L + ++     G ++++VSSGA+G G   L   +          +P++    +A A+VGQ +L   + T F++   T  Q+L++  DF   +  +    T+  L  L  + + NEND V+T +         F DND                  SDVEGLY G P +  +  I     +     +  G    +G GGM +K++        G+PV++ +
Sbjct:   34 RLDRLADAVEARMRAGSDVVVVSSGAIGAGLAPLGLSR----------RPRDLATKQAAASVGQLALAHAWGTSFARYGRTVGQVLLSADDFSRREHHRNAQRTLDRLRSLGAVAVVNENDTVATEEIR-------FGDNDRLAALVAHLVGADALILLSDVEGLYDGDPRKGAATFIPEVRSSADLDGVIAGSGGVLGTGGMASKLSAARLAADAGVPVLLAA 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRMU (Glutamate 5-kinase OS=Streptococcus mutans GN=proB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15
Identity = 55/201 (27.36%), Postives = 98/201 (48.76%), Query Frame = 2
Query:   29 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKV 625
            +  L ++  ++ILVSSGA+G G   L+  K          +P      +A ++VGQ ++M+LY  +FS      SQ+L+T       +  + + +T ++LL +R++PI NENDA+S  +    D +  F DND                  SD++GL+   P+  ++ ++   +    +   +   G  S+ G GGM +K+
Sbjct:   42 ISNLMNRELDVILVSSGAMGFGLDILKMDK----------RPAEVARQQAVSSVGQVAMMSLYSQIFSHYQTNVSQILLTRDVVEFPESLENVTNTFETLLSMRIVPIVNENDAISVDEM---DHTTKFGDNDRLSALVANITNSDLLIMLSDIDGLFDKNPTIYDNAVLRENVTEITEEILKSAGGAGSKFGTGGMMSKI 229          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_RHOBA (Glutamate 5-kinase OS=Rhodopirellula baltica GN=proB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15
Identity = 69/238 (28.99%), Postives = 101/238 (42.44%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK---ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG---FAMDSI 697
            R+  L EQL  +   G + I+VSSGAVG G             +A L  PQ   D K   A AA+GQ+ L+  Y+    +    ++Q+L+T +D R       + + +  + +L  I + NEND+V+       +    F DND                  +DV  LY G P E +S+ IH              D+ S V +GGM  K+         G P +I SG   F +D I
Sbjct:   43 RVDRLAEQLCRIADTGRQTIMVSSGAVGAG-------------VAKLGLPQRPTDLKSLQAIAAIGQADLIGAYEKSLQKRGRHAAQVLLTRNDLRRRSGYLHVRNALNGIDELGAIAVVNENDSVAV-----SELKTTFGDNDRLAAQVAGLFNDVMLILLTDVSALYDGHPDEKDSQPIHMVHDVDDGVMALVDDQVSTVSKGGMGGKLRASKLANSHGHPTIIGSGTEEFVLDRI 262          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_MYCPA (Glutamate 5-kinase OS=Mycobacterium paratuberculosis GN=proB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15
Identity = 60/226 (26.55%), Postives = 100/226 (44.25%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            GRL  L + ++     G ++++VSSGA+  G + L   +          +P++    +A A+VGQ +L+  +   F++   T  Q+L++  D            T+  L  L  + I NEND V+T +         F DND                  SD++GLY S P     +K I     A+  A +  G  S +G GGMT+K++        G+PV++ +
Sbjct:   33 GRLAGLADAIEARMKAGTDVVIVSSGAIAAGIEPLGLSR----------RPRDLATKQAAASVGQVALVNSWSAAFARYGRTVGQVLLSAHDISMRAQHTNAQRTLDRLRALHAVAIVNENDTVATNEIR-------FGDNDRLSALVAHLVGAEALVLLSDIDGLYDSDPRKTKGAKFIPEVTGAEDLAGVVAGPGSDLGTGGMTSKMSSALLAADAGVPVLLAA 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_MYCA1 (Glutamate 5-kinase OS=Mycobacterium avium (strain 104) GN=proB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15
Identity = 60/226 (26.55%), Postives = 100/226 (44.25%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            GRL  L + ++     G ++++VSSGA+  G + L   +          +P++    +A A+VGQ +L+  +   F++   T  Q+L++  D            T+  L  L  + I NEND V+T +         F DND                  SD++GLY S P     +K I     A+  A +  G  S +G GGMT+K++        G+PV++ +
Sbjct:   33 GRLAGLADAIEARMKAGTDVVIVSSGAIAAGIEPLGLSR----------RPRDLATKQAAASVGQVALVNSWSAAFARYGRTVGQVLLSAHDISMRAQHTNAQRTLDRLRALHAVAIVNENDTVATNEIR-------FGDNDRLSALVAHLVGAEALVLLSDIDGLYDSDPRKTKGAKFIPEVTGAEDLAGVVAGPGSDLGTGGMTSKMSSALLAADAGVPVLLAA 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRTD (Glutamate 5-kinase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=proB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 59/201 (29.35%), Postives = 96/201 (47.76%), Query Frame = 2
Query:   29 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK--SRVGRGGMTAKV 625
            +  L+++G E++LVSSGA+G G   L     + +  A++ K Q      A ++VGQ ++M+LY  +FS      SQLL+T       +      +  +SL +L V+PI NENDAVS  +    D +  F DND                  SD++GL+   P+      + +Y+    +  +       S+ G GGM +K+
Sbjct:   39 ISSLHNKGIEVVLVSSGAMGFGLNVLD----LETRPAEVGKQQ------AVSSVGQVAMMSLYSQVFSHYQTKVSQLLLTRDVVEYPESLANAINAFESLFELGVVPIVNENDAVSVDEM---DHATKFGDNDRLSAIVAKVVGADLLIMLSDIDGLFDKNPNVYEDATLRSYVPEITEEILASAGAAGSKFGTGGMMSKI 226          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRT2 (Glutamate 5-kinase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=proB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 59/201 (29.35%), Postives = 96/201 (47.76%), Query Frame = 2
Query:   29 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK--SRVGRGGMTAKV 625
            +  L+++G E++LVSSGA+G G   L     + +  A++ K Q      A ++VGQ ++M+LY  +FS      SQLL+T       +      +  +SL +L V+PI NENDAVS  +    D +  F DND                  SD++GL+   P+      + +Y+    +  +       S+ G GGM +K+
Sbjct:   39 ISSLHNKGIEVVLVSSGAMGFGLNVLD----LETRPAEVGKQQ------AVSSVGQVAMMSLYSQVFSHYQTKVSQLLLTRDVVEYPESLANAINAFESLFELGVVPIVNENDAVSVDEM---DHATKFGDNDRLSAIVAKVVGADLLIMLSDIDGLFDKNPNVYEDATLRSYVPEITEEILASAGAAGSKFGTGGMMSKI 226          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_PROM44.292e-1528.64Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_DEIGD4.292e-1530.04Glutamate 5-kinase OS=Deinococcus geothermalis (st... [more]
PROB_ROSDO5.605e-1527.59Glutamate 5-kinase OS=Roseobacter denitrificans (s... [more]
PROB_NOCFA5.605e-1525.89Glutamate 5-kinase OS=Nocardia farcinica GN=proB P... [more]
PROB_STRMU7.321e-1527.36Glutamate 5-kinase OS=Streptococcus mutans GN=proB... [more]
PROB_RHOBA7.321e-1528.99Glutamate 5-kinase OS=Rhodopirellula baltica GN=pr... [more]
PROB_MYCPA7.321e-1526.55Glutamate 5-kinase OS=Mycobacterium paratuberculos... [more]
PROB_MYCA17.321e-1526.55Glutamate 5-kinase OS=Mycobacterium avium (strain ... [more]
PROB_STRTD1.249e-1429.35Glutamate 5-kinase OS=Streptococcus thermophilus (... [more]
PROB_STRT21.249e-1429.35Glutamate 5-kinase OS=Streptococcus thermophilus (... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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