FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_NITMU (Glutamate 5-kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=proB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 73/224 (32.59%), Postives = 105/224 (46.88%), Query Frame = 2
Query:   26 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            Q+ +L   G E++LVSSGA+  G QRL+++K          +P    + +A AAVGQ  L+  Y+T F + ++ S+Q+L+T  D  D         T+ +LLDL VIPI NEND V+T +         F DND+                 +D  GL++  P  +  +KL+          E +  G  S +GRGGM  KV         G   VI SG   D
Sbjct:   38 QIVKLKKTGKEVVLVSSGAIAEGMQRLKWKK----------RPHAVHELQAAAAVGQMGLVQAYETCFRKHELHSAQILLTHEDLSDRKRYLNARSTLATLLDLNVIPIINENDTVATDEIR-------FGDNDTLAALVTNLIEADVLVILTDQRGLFTADPRKDTQAKLVEQAKAGDADIERMAGGAGSEIGRGGMLTKVLAAKRAARSGAHTVIASGREAD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_DEHE1 (Glutamate 5-kinase OS=Dehalococcoides ethenogenes (strain 195) GN=proB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 72/233 (30.90%), Postives = 110/233 (47.21%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            R+  L  Q+ +L   G E+I+VSSGA+  GR ++  R +          P++    +  AA+GQS LM  YD LFS   +T +Q L+T SD  D        +T+ +L++L VI I NEND V    A  E     F DND+                 +++ GLY+  P+  P+++LI        + E +  G  +++G GGM  K+         G+ V+I  G   D I
Sbjct:   29 RMADLCRQIADLTRLGTEVIIVSSGAIAAGRAKMGLRHI----------PKDVPFKQVLAAIGQSQLMNYYDQLFSPHGLTVAQGLLTKSDLSDRSGYLNARNTLLALMELGVITIVNENDVV----AVDEIQQAKFGDNDNLSAMVANLIEADLLLILTNIRGLYTADPTLHPDARLITEVKEITEELEKLAAGSSNKLGTGGMVTKLEAARLATSSGVNVIIADGHIPDII 247          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CYAP8 (Glutamate 5-kinase OS=Cyanothece sp. (strain PCC 8801) GN=proB PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21
Identity = 78/228 (34.21%), Postives = 112/228 (49.12%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKH--QAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            + AL+E L +L   G  IILVSSGAVGVG  RL  +          ++P+     +A AAVGQ  L+ +YD LF+ L    +Q+L+T  +  +        +T +SLL+L VIPI NEND V+  +         F DND+                 +DV+ LYS  P   P++K I T + +    Q ++  GD+ S+ G GGM  K+         G+  VIT G
Sbjct:   27 IAALVETLTQLRQLGHRIILVSSGAVGVGCSRLNLK----------ERPKKMAMKQAIAAVGQGRLIRVYDDLFNTLGQPIAQVLLTRRELIERSCYVNASNTFESLLELGVIPIVNENDTVAIEELK-------FGDNDTLSALVASLIHADWLFLLTDVDRLYSADPRLVPDAKPI-TLVNSDEFAQLQVKAGDRGSQWGTGGMATKLAAARIATGAGVRTVITHG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURS3 (Glutamate 5-kinase OS=Burkholderia sp. (strain 383) GN=proB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 72/230 (31.30%), Postives = 109/230 (47.39%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++ D+ ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL++  P  +PN+ L+      A     +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTMLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQSGLFTADPRKDPNATLVAEANAGAPELEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGRETD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BRAJA (Glutamate 5-kinase OS=Bradyrhizobium japonicum GN=proB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 68/226 (30.09%), Postives = 106/226 (46.90%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD-KSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L AL + + +L+ +G ++++VSSG++ +GR RL+  +           P    + +A AAVGQ +L  ++  +     + + Q+LVT  D  +         T+  LL+ R IP+ NEND V+T +  Y        DND                  SD++GLY  PP + PN+KLI        + E   GD +S + RGGM  KV         G  ++I SG
Sbjct:   34 LAALADDMAKLHKEGRDVLVVSSGSIALGRSRLKLPR----------GPLKLEESQAAAAVGQIALARIWSEVLGAHGIDAGQILVTLQDTEERRRYLNARSTIGKLLEWRAIPVINENDTVATTEIRY-------GDNDRLAARVATMASADLLVLLSDIDGLYDAPPKNNPNAKLIPVVDSISSEIEAVAGDAESELSRGGMRTKVEAAKIATTGGTHMLIASG 242          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BIFLO (Glutamate 5-kinase OS=Bifidobacterium longum GN=proB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 70/226 (30.97%), Postives = 106/226 (46.90%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIH---TYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVIT 673
            +L AL   L ++   G  ++LVSSGA+  G   L +            +P +    +A AAVGQ  LMA Y+T F +  +   Q+L+T  D       + +  T+  LLDL V+PI NEND++++ +         F DND                  +DV+ LY+ PPS+P S+ +      I A    +++ G  S+VG GGM  K+         GIP V+T
Sbjct:   39 KLDALAAALAQVRLMGGRVVLVSSGAIAAGFGPLGFDS----------RPVDVATQQATAAVGQGLLMARYETAFGRFGIRVGQILITAEDTIRATQYRNVERTLDRLLDLGVVPIINENDSLASNEIR-------FGDNDRLSALVANLVRAEALVLLTDVDALYTAPPSQPGSRRVEYVPNVIDALGDIQVS-GSGSKVGTGGMVTKLEAARVAAVSGIPTVLT 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BIFLD (Glutamate 5-kinase OS=Bifidobacterium longum (strain DJO10A) GN=proB PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.928e-21
Identity = 70/226 (30.97%), Postives = 106/226 (46.90%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIH---TYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVIT 673
            +L AL   L ++   G  ++LVSSGA+  G   L +            +P +    +A AAVGQ  LMA Y+T F +  +   Q+L+T  D       + +  T+  LLDL V+PI NEND++++ +         F DND                  +DV+ LY+ PPS+P S+ +      I A    +++ G  S+VG GGM  K+         GIP V+T
Sbjct:   39 KLDALAAALAQVRLMGGRVVLVSSGAIAAGFGPLGFDS----------RPVDVATQQATAAVGQGLLMARYETAFGRFGIRVGQILITAEDTIRATQYRNVERTLDRLLDLGVVPIINENDSLASNEIR-------FGDNDRLSALVANLVRAEALVLLTDVDALYTAPPSQPGSRRVEYVPNVIDALGDIQVS-GSGSKVGTGGMVTKLEAARVAAVSGIPTVLT 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_RALME (Glutamate 5-kinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=proB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 68/224 (30.36%), Postives = 106/224 (47.32%), Query Frame = 2
Query:   26 QLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            Q+ +L   G E++LVSSGA+  G QRL + +          +P+   + +A AAVGQ  L  +Y++ F +  + ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GLY+  P  +PN++ +H  +    + E +  G  S +GRGGM  K+         G    I SG   D
Sbjct:   38 QIAKLRGTGKEVVLVSSGAIAEGMQRLGWAR----------RPKEIHELQAAAAVGQMGLAQVYESQFGRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVTDEIK-------FGDNDTLGALVTNLIEGDALVILTDQRGLYTADPRKDPNAEFVHEALAGTPELEAMAGGAGSSIGRGGMLTKILAAKRAAKSGAHTTIASGREAD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_HAEIE (Glutamate 5-kinase OS=Haemophilus influenzae (strain PittEE) GN=proB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            ++ Q+ +L++ GF I++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD  +IP+ NENDAV+T +           DND+                 +D +GL+ S P   P +KLI    +   H   I  G  + +G GGM  K+         GI  +I  G
Sbjct:   30 IVRQIAQLHNDGFRIVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQAWEKLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNHIIPVINENDAVATAEIK-------VGDNDNLSALVAILVQAEQLYLLTDQQGLFDSDPRKNPEAKLIPVVEQITDHIRSIAGGSGTNLGTGGMMTKIIAADVATRSGIETIIAPG 235          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_HAEI8 (Glutamate 5-kinase OS=Haemophilus influenzae (strain 86-028NP) GN=proB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            ++ Q+ +L++ GF I++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD  +IP+ NENDAV+T +           DND+                 +D +GL+ S P   P +KLI    +   H   I  G  + +G GGM  K+         GI  +I  G
Sbjct:   30 IVRQIAQLHNDGFRIVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQAWEKLFAIYDIHIGQLLLTRADIEDRERFLNARDTLHALLDNHIIPVINENDAVATAEIK-------VGDNDNLSALVAILVQAEQLYLLTDQQGLFDSDPRKNPEAKLIPVVEQITDHIRSIAGGSGTNLGTGGMMTKIIAADVATRSGIETIIAPG 235          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_NITMU6.836e-2132.59Glutamate 5-kinase OS=Nitrosospira multiformis (st... [more]
PROB_DEHE16.836e-2130.90Glutamate 5-kinase OS=Dehalococcoides ethenogenes ... [more]
PROB_CYAP86.836e-2134.21Glutamate 5-kinase OS=Cyanothece sp. (strain PCC 8... [more]
PROB_BURS38.928e-2131.30Glutamate 5-kinase OS=Burkholderia sp. (strain 383... [more]
PROB_BRAJA8.928e-2130.09Glutamate 5-kinase OS=Bradyrhizobium japonicum GN=... [more]
PROB_BIFLO8.928e-2130.97Glutamate 5-kinase OS=Bifidobacterium longum GN=pr... [more]
PROB_BIFLD8.928e-2130.97Glutamate 5-kinase OS=Bifidobacterium longum (stra... [more]
PROB_RALME1.166e-2030.36Glutamate 5-kinase OS=Ralstonia metallidurans (str... [more]
PROB_HAEIE1.166e-2030.49Glutamate 5-kinase OS=Haemophilus influenzae (stra... [more]
PROB_HAEI81.166e-2030.49Glutamate 5-kinase OS=Haemophilus influenzae (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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