FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRT1 (Glutamate 5-kinase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=proB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 59/201 (29.35%), Postives = 96/201 (47.76%), Query Frame = 2
Query:   29 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDK--SRVGRGGMTAKV 625
            +  L+++G E++LVSSGA+G G   L     + +  A++ K Q      A ++VGQ ++M+LY  +FS      SQLL+T       +      +  +SL +L V+PI NENDAVS  +    D +  F DND                  SD++GL+   P+      + +Y+    +  +       S+ G GGM +K+
Sbjct:   39 ISSLHNKGIEVVLVSSGAMGFGLNVLD----LETRPAEVGKQQ------AVSSVGQVAMMSLYSQVFSHYQTKVSQLLLTRDVVEYPESLANAINAFESLFELGVVPIVNENDAVSVDEM---DHATKFGDNDRLSAIVAKVVGADLLIMLSDIDGLFDKNPNVYEDATLRSYVPEITEEILASAGAAGSKFGTGGMMSKI 226          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_PROMT (Glutamate 5-kinase OS=Prochlorococcus marinus (strain NATL2A) GN=proB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 61/219 (27.85%), Postives = 97/219 (44.29%), Query Frame = 2
Query:   29 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            + +    G +IILVSSGAVG+G  ++R++           +P+  +  +A AA+GQ  LMALY+   S      +Q+L+T S+    +       T++ LL+  VIPI NEND  S  +  Y        DND+                 +D++ LYS  P     +K I     +K    +    +++  G GG+  K+         GI V +  G
Sbjct:   32 ISKAQRNGDKIILVSSGAVGLGCHQMRFKT----------RPKEIISLQASAAIGQLHLMALYEKAMSSFGYKVAQILLTRSELGSRNSYNSASQTLKRLLEWDVIPIVNENDITSDEELKY-------GDNDTLSALVATAISADQLILLTDIDHLYSSDPKINSKAKPIKDINNSKELNNLELANEQTSWGTGGIKTKLTAAKIATESGIKVQLADG 233          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ALKOO (Glutamate 5-kinase OS=Alkaliphilus oremlandii (strain OhILAs) GN=proB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 62/226 (27.43%), Postives = 104/226 (46.02%), Query Frame = 2
Query:   14 ALLEQLKELNSQGFEIILVSSGA--VGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSE-PNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            AL +Q+  L  +G ++++V+SGA   G+ R     RK       D+   Q      A  A+GQ  LM+ Y++ FS   +   QLL+T  DF D+     + +T+ +L+D  ++PI NEND VS  +           DND+                 SD++G+Y+  P E  +++L+           EI  G+ +  G GG+  K+          IP+++ +G
Sbjct:   35 ALCQQVAFLVGEGKQVVIVTSGARIAGISRTNKWSRK------EDMNYKQ------ALCAIGQVELMSAYNSHFSHHGIYIGQLLLTREDFFDKTRNLNIRNTLFTLVDEGIVPIINENDTVSVEQIK-------IGDNDTLAAYTATLWNADLLILLSDIDGIYNKNPKEYEDAELLEQVQNIDDMLKEIEVGETNSFGTGGIETKIEAARIVNRYNIPMILGNG 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_RHOFD (Glutamate 5-kinase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 66/232 (28.45%), Postives = 102/232 (43.97%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNS-KLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            +G    Q+  L     E+I+VSSGAV  G +RL +            +P    + +A AAVGQ  L  +Y+T   +  + S+Q+L+T +D  D +       T+ +LL L V+P+ NEND V   +         F DND+                 +D +GL++  P + +S  L+H         E +  G  S +GRGGM  K+         G   VI  G   D++
Sbjct:   37 IGEWCRQIALLVQDKREVIMVSSGAVAEGMKRLGWAT----------RPHLIHELQAAAAVGQMGLAQMYETKLRENGLGSAQVLLTHADLADRERYLNARSTLLTLLKLGVVPVINENDTVVNDEIK-------FGDNDTLGALVANLVEADALVILTDQKGLFTADPRKDSSATLVHEAKSGDPALEAMAGGAGSNLGRGGMITKILAAKRAAGSGASTVIAWGREPDAL 251          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_GLUOX (Glutamate 5-kinase OS=Gluconobacter oxydans GN=proB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 64/227 (28.19%), Postives = 100/227 (44.05%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGK-ACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG--RGGMTAKVNXXXXXXXXGIPVVITSG 679
            L ++   + +L S+G E+I+VSSGA+ + R RL            L   +  LD K A A+VGQ  L   +    +  D+ ++QLL+T  D  + +       T+Q+LLDL  +P+ NENDA++T +         F DND                  SD++GLY+  P +  S      +       +  G +   G   GGM  K+         G  +VI +G
Sbjct:   38 LQSVCADIADLRSRGAEVIVVSSGAISLARHRL-----------GLTSRRLRLDEKQAMASVGQIGLAQGWSAALAGHDLVAAQLLLTPDDTENRERHLNARATLQTLLDLGCVPVINENDAIATGEIR-------FGDNDRLGARVAQMTGADCLVLLSDIDGLYTADPRQDPSARHIPVVEQMTDEIMAMGGEPPPGYSSGGMRTKLLAARIATRAGANMVIAAG 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: YHJ3_YEAST (Uncharacterized protein YHR033W OS=Saccharomyces cerevisiae GN=YHR033W PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 62/222 (27.93%), Postives = 99/222 (44.59%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYS-GPPSEPNSK---LIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVI 670
            ++E +  L   G ++I+VSSG + VG   L              KP+   + +A AAVGQ  L+A ++ LFSQ    ++Q+L+T +D    +      +T+  LL + VIPI NEND +S  +         F DND+                 +DV+ LY+  P + P+++   L+            + G  S VG GGM  K+         GI  ++
Sbjct:   32 IVETVTNLKRMGHKVIIVSSGGIAVGLDALNIP----------HKPKQLSEVQAIAAVGQGRLIARWNMLFSQYGEQTAQILLTRNDILRWNQYNNARNTINELLAMGVIPIVNENDTLSISEIE-------FGDNDTLSAITAALVGADFLFLLTDVDCLYTDNPRTNPDARPIVLVPELSEGLPGVNTSSGSGSEVGTGGMRTKLIAADLASNAGIETIV 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_MYCVP (Glutamate 5-kinase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 59/224 (26.34%), Postives = 96/224 (42.86%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            RL  L + ++     G ++++VSSGA+  G + L   K          +P +    +A A+VGQ +L+  + + F +   T  Q+L+T  D            T+  L  L  + I NEND V+T +         F DND                  SDV+GLY   P + N++ I           +T G  S +G GGM +K++        G+PV++ +
Sbjct:   34 RLQDLADAIEARMKAGSDVVIVSSGAIAAGIEPLGLTK----------RPTDLATKQAAASVGQVALVNTWSSAFGRYHRTVGQVLLTAHDISMRVQHTNAQRTLDRLRALHAVAIVNENDTVATNEIR-------FGDNDRLSALVAHLVGADALILLSDVDGLYDSDPRKGNARFIPEVDGPDDLEGVTAGRGSHLGTGGMVSKLSSALLAADAGVPVLLAA 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_JANSC (Glutamate 5-kinase OS=Jannaschia sp. (strain CCS1) GN=proB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 68/226 (30.09%), Postives = 99/226 (43.81%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKL-IHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L AL + +  L   G ++ILVSSGA+ +GR  L        +L D     +E   +A AAVGQ  L   Y+ + + L +TS+Q+L+T  D  D         T  +LL    +PI NEND ++T +  Y        DND                  SDV+GLY+  P++  +   +        + E   GD  S + +GGM  KV         G  + IT G
Sbjct:   32 LAALADDIAALKGAGTDVILVSSGAIALGRGVL--------ALGDGALSLDE--AQAAAAVGQIRLARAYEEVLAPLGLTSAQILLTLDDSADRRRYLNTRATFAALLARGAVPIVNENDTIATDEIRY-------GDNDRLAANVAVMAGADICVLLSDVDGLYTANPNDDTTAAHLPVIDTITPEIEAMAGDAGSGLSKGGMKTKVLAARTATAAGCAMAITQG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SILPO (Glutamate 5-kinase OS=Silicibacter pomeroyi GN=proB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 70/234 (29.91%), Postives = 106/234 (45.30%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYD--TVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L +L   +  L   G ++ILVSSG++ +GR  L   +    +   L++ Q      A AAVGQ  L   Y+   +   +T++Q+LVT  D   ED R+ L    T+++LL L  +PI NEND V+T +  Y        DND                  SDV+G Y+G PS +P +       R   +     GD  S + +GGM  K+         G  + IT G  ++ +
Sbjct:   32 LHSLAADVAWLKGLGLDVILVSSGSIALGRGVLGLPR----TALPLEQSQ------AAAAVGQIRLARAYEEALAPHRITTAQVLVTLED--SEDRRRYLNSRATLETLLGLGAVPIVNENDTVATDEIRY-------GDNDRLAAQIAVTVGADQLILLSDVDGFYTGNPSDDPGATRFDVIDRITPEIVAMAGDAGSGLSKGGMKTKLMAAQMATAGGCAMAITEGSPLNPL 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_VEREI (Glutamate 5-kinase OS=Verminephrobacter eiseniae (strain EF01-2) GN=proB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 59/210 (28.10%), Postives = 96/210 (45.71%), Query Frame = 2
Query:   56 EIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            E+++VSSGA+  G +RL +          + +P+     +A AAVGQ  L  +Y+T   +  + S+Q+L+T +D  D +       T+ +LL L V+P+ NEND V   +         F DND+                 +D +GLY+  P  +P+++L+          E +  G  S +G+GGM  K+         G   VI  G
Sbjct:   53 EVVMVSSGAIAEGMKRLGW----------VGRPREIHALQAAAAVGQMGLAQMYETKLREQGMGSAQVLLTHADLADRERYLNARSTLLTLLRLGVVPVINENDTVVNDEIK-------FGDNDTLGALVANLVEADALIILTDQKGLYTADPRRDPSARLVRQAKAGDSALEAMAGGAGSSIGKGGMITKILAAKRAAGSGASTVIAWG 245          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_STRT11.249e-1429.35Glutamate 5-kinase OS=Streptococcus thermophilus (... [more]
PROB_PROMT1.249e-1427.85Glutamate 5-kinase OS=Prochlorococcus marinus (str... [more]
PROB_ALKOO1.249e-1427.43Glutamate 5-kinase OS=Alkaliphilus oremlandii (str... [more]
PROB_RHOFD1.631e-1428.45Glutamate 5-kinase OS=Rhodoferax ferrireducens (st... [more]
PROB_GLUOX1.631e-1428.19Glutamate 5-kinase OS=Gluconobacter oxydans GN=pro... [more]
YHJ3_YEAST2.130e-1427.93Uncharacterized protein YHR033W OS=Saccharomyces c... [more]
PROB_MYCVP2.130e-1426.34Glutamate 5-kinase OS=Mycobacterium vanbaalenii (s... [more]
PROB_JANSC2.130e-1430.09Glutamate 5-kinase OS=Jannaschia sp. (strain CCS1)... [more]
PROB_SILPO2.782e-1429.91Glutamate 5-kinase OS=Silicibacter pomeroyi GN=pro... [more]
PROB_VEREI3.633e-1428.10Glutamate 5-kinase OS=Verminephrobacter eiseniae (... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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