FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_PELUB (Glutamate 5-kinase OS=Pelagibacter ubique GN=proB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 64/222 (28.83%), Postives = 98/222 (44.14%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELD-GKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYS-GPPSEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            + ++EL  Q  ++I+VSSGA+ +G ++L           ++ K   ++D  +A A++GQ  LM L+   F +L +  SQ+L+T  D            T  +L  L  +PI NEND ++T +  Y        DND                  SDV+GLY+  P    N+KLI          E I     S  G GGM  K++        G  +VI +G
Sbjct:   35 KDIQELIKQNKKVIIVSSGAIAMGCKKL-----------NISKKNLKIDKSQAVASIGQIELMNLFSETFVKLKINISQILLTLEDTEQRRRALNAKRTFDNLFKLGFVPIVNENDTIATSEIKY-------GDNDRLASRVAQISGADSLILLSDVDGLYTHNPKIYKNAKLIKEIRNIDKDIEKIATKSISEHGTGGMKTKIDAAKICQLSGCQMVIANG 238          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_MAGSA (Glutamate 5-kinase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=proB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 65/231 (28.14%), Postives = 98/231 (42.42%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAM 688
            G L  L   +    ++G E+I+VSSGAV VGR++L            L  P    + +A AA GQ  L   +    +   +T +Q+L+T  D  +         T+++LL L  +P+ NEND V+T +           DND                  SD++GLY+  P  +P+++ I        + E   GD  S  G GGM  K+         G  + IT G  M
Sbjct:   30 GWLETLAADIAACKARGQEVIVVSSGAVAVGRRKL-----------GLVPPLKLEEKQAAAATGQIRLAHAWQDALAHHQITVAQVLLTLDDSENRRRYLNARSTLETLLKLGAVPVINENDTVATAEIR-------VGDNDRLAARVAQMVSADALVLFSDIDGLYTADPRKDPDARFIPEVHELTPEIEAMAGDPGSAYGSGGMVTKLVAARICLSAGCRMAITRGEPM 242          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CAMJE (Glutamate 5-kinase OS=Campylobacter jejuni GN=proB PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 59/228 (25.88%), Postives = 104/228 (45.61%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSE-PNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGF 682
            RL  L+  L +L  + +E+ILV+S A+  G  +L           D+ + +N ++ +  AA+GQ  L+++Y+ L ++ +    Q+L+T  DF      K   + +  +++L ++PI NENDA +  +        +F DNDS                 SD++G Y   PSE  ++K +      K +  + T    S  G GG+  K+            + + SGF
Sbjct:   23 RLKNLVAFLAKLMEK-YEVILVTSAAISAGHTKL-----------DIDR-KNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFDSRKATKHAKNAIDMMINLGILPIINENDATAIEEI-------VFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLLEHNKKMFLASGF 230          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CAMJ8 (Glutamate 5-kinase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=proB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 59/228 (25.88%), Postives = 104/228 (45.61%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSE-PNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGF 682
            RL  L+  L +L  + +E+ILV+S A+  G  +L           D+ + +N ++ +  AA+GQ  L+++Y+ L ++ +    Q+L+T  DF      K   + +  +++L ++PI NENDA +  +        +F DNDS                 SD++G Y   PSE  ++K +      K +  + T    S  G GG+  K+            + + SGF
Sbjct:   23 RLKNLVAFLAKLMEK-YEVILVTSAAISAGHTKL-----------DIDR-KNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFDSRKATKHAKNAIDMMINLGILPIINENDATAIEEI-------VFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLLEHNKKMFLASGF 230          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_DESHY (Glutamate 5-kinase OS=Desulfitobacterium hafniense (strain Y51) GN=proB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 63/232 (27.16%), Postives = 99/232 (42.67%), Query Frame = 2
Query:    5 RLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPS-EPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            R+  ++  +++L   G E +LVSSGAV  G  +L  +           KP++    +A AAVGQ  L+  Y        +  +Q+L++  D  +    +   +T++ LL  +VIPI NEND V+  +         F DND                  +DV+GLYS  P   P ++LI           I  G  S +G GGM  K+         G+ + +     M+ I
Sbjct:   30 RIAGVIAGIRQL---GVECVLVSSGAVAAGVGKLGLKT----------KPKDMAGKQAVAAVGQGVLIEKYALALEARGLVCAQVLLSRLDLAEASRYRNAQNTLEQLLRYQVIPIINENDTVAVEEL-------CFGDNDRLSALVAGLVHGDLLVILTDVDGLYSANPKLNPQAELIEEVEDLTQVMHIAGGAGSSMGTGGMVTKLKAAEITTRFGMGMFLLHSKRMEEI 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_LEPIN (Glutamate 5-kinase OS=Leptospira interrogans GN=proB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 63/227 (27.75%), Postives = 100/227 (44.05%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L+  ++ L   G ++ILVSSGA+  GR  L       SS   L + Q      A AA+GQ+ L+ LYD+ FS+++++ +Q+L    D   ++  K L +T   L++  ++P+ NEND+V+T +         F DND                  + V+G           K++    +   +     G  S  G GGM  K+         GIP  I +G  M  I
Sbjct:   41 LVSDIRHLRDLGKKVILVSSGAIARGRLLLSELPSTISSGDSLAEKQ------ALAAMGQNRLVNLYDSFFSKVNLSIAQILFGVLDLESKEGYKNLKNTFTQLVEWGILPVVNENDSVATEEVK-------FGDNDMLSALVSLIVEADLLIILTGVDGFLK------EEKVVPFLEKISKEDLGLAGGPSGPGTGGMFTKLKSAGLLSEAGIPTAILNGKKMHVI 248          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_LEPIC (Glutamate 5-kinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=proB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 63/227 (27.75%), Postives = 100/227 (44.05%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            L+  ++ L   G ++ILVSSGA+  GR  L       SS   L + Q      A AA+GQ+ L+ LYD+ FS+++++ +Q+L    D   ++  K L +T   L++  ++P+ NEND+V+T +         F DND                  + V+G           K++    +   +     G  S  G GGM  K+         GIP  I +G  M  I
Sbjct:   41 LVSDIRHLRDLGKKVILVSSGAIARGRLLLSELPSTISSGDSLAEKQ------ALAAMGQNRLVNLYDSFFSKVNLSIAQILFGVLDLESKEGYKNLKNTFTQLVEWGILPVVNENDSVATEEVK-------FGDNDMLSALVSLIVEADLLIILTGVDGFLK------EEKVVPFLEKISKEDLGLAGGPSGPGTGGMFTKLKSAGLLSEAGIPTAILNGKKMHVI 248          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_STRU0 (Glutamate 5-kinase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=proB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 59/201 (29.35%), Postives = 95/201 (47.26%), Query Frame = 2
Query:   29 LKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIR--AKHQAEITFGDKSRVGRGGMTAKV 625
            +  L ++G ++ILVSSGA+G G   L+  K  +    DL K Q      A ++VGQ ++M+LY  +FS      SQ+L+T       +    + +  +SL+ + ++PI NENDAVS  +    D +  F DND                  SD++GLY   P+      + + +        +   G  S+ G GGM +K+
Sbjct:   40 MSSLKNKGKDLILVSSGAMGFGLDILKMDKRPS----DLAKQQ------AVSSVGQVAMMSLYSQIFSHYQTNVSQILLTRDVVIFPESLANVTNAFESLMAMGIVPIVNENDAVSVDEM---DHATKFGDNDRLSAVVAEITKADLLIMLSDIDGLYDKNPTIYEDAQLRSIVTEITDEIIKSAGGAGSKFGTGGMLSKI 227          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_MYCMM (Glutamate 5-kinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=proB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 57/224 (25.45%), Postives = 96/224 (42.86%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSE-PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVI 670
            GRL  L + ++     G ++++VSSGA+  G + L   +          +P++    +A A+VGQ +L+  +   F++   T  Q+L+T  D            T+  L  L  + I NEND V+T +         F DND                  SD++GLY   P +  N++ I           +  G  S +G GGM +K++        G+PV++
Sbjct:   34 GRLAELADAIESRMKAGTDVVIVSSGAIAAGIEPLGLSR----------RPKDLATKQAAASVGQVALVNSWSAAFARYGRTVGQVLLTAHDIAMRVQHSNAQRTLDRLRALHAVGIVNENDTVATNEIR-------FGDNDRLSALVAHLVGADALVLLSDIDGLYDADPGKFQNARFIPEVSGPADLDGVVAGQGSHLGTGGMASKMSSALLAADAGVPVLL 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_MYCUA (Glutamate 5-kinase OS=Mycobacterium ulcerans (strain Agy99) GN=proB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13
Identity = 57/224 (25.45%), Postives = 96/224 (42.86%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSE-PNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVI 670
            GRL  L + ++     G ++++VSSGA+  G + L   +          +P++    +A A+VGQ +L+  +   F++   T  Q+L+T  D            T+  L  L  + I NEND V+T +         F DND                  SD++GLY   P +  N++ I           +  G  S +G GGM +K++        G+PV++
Sbjct:   34 GRLAELADAIESRMKAGTDVVIVSSGAIAAGIEPLGLSR----------RPKDLATKQAAASVGQVALVNSWSAAFARYGRTVGQVLLTAHDIAMRVQHTNAQRTLDRLRALHAVGIVNENDTVATNEIR-------FGDNDRLSALVAHLVGADALVLLSDIDGLYDADPRKFQNARFIPEVSGPADLDGVVAGQGSHLGTGGMASKMSSALLAADAGVPVLL 240          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_PELUB3.633e-1428.83Glutamate 5-kinase OS=Pelagibacter ubique GN=proB ... [more]
PROB_MAGSA3.633e-1428.14Glutamate 5-kinase OS=Magnetospirillum magneticum ... [more]
PROB_CAMJE3.633e-1425.88Glutamate 5-kinase OS=Campylobacter jejuni GN=proB... [more]
PROB_CAMJ83.633e-1425.88Glutamate 5-kinase OS=Campylobacter jejuni subsp. ... [more]
PROB_DESHY4.745e-1427.16Glutamate 5-kinase OS=Desulfitobacterium hafniense... [more]
PROB_LEPIN6.197e-1427.75Glutamate 5-kinase OS=Leptospira interrogans GN=pr... [more]
PROB_LEPIC6.197e-1427.75Glutamate 5-kinase OS=Leptospira interrogans serog... [more]
PROB_STRU08.094e-1429.35Glutamate 5-kinase OS=Streptococcus uberis (strain... [more]
PROB_MYCMM1.381e-1325.45Glutamate 5-kinase OS=Mycobacterium marinum (strai... [more]
PROB_MYCUA2.355e-1325.45Glutamate 5-kinase OS=Mycobacterium ulcerans (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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