FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_XANAC (Glutamate 5-kinase OS=Xanthomonas axonopodis pv. citri GN=proB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 61/212 (28.77%), Postives = 91/212 (42.92%), Query Frame = 2
Query:   50 GFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQA-EITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            G E+++VSSGAV  GR  L     V + +A  Q         A AA+GQ+ L+AL+   F +     +Q+L+T  D R+         T+  LL L  +P+ NEND VS  +           DND+                 +D++GLYS  P S P ++ +        +   +  G  S VG GGM  K+         GI   + +G
Sbjct:   35 GRELVIVSSGAVAAGRAILPKAMDVGAPIAARQ---------ALAALGQAQLIALWQRFFER---PVAQVLLTHDDLRNRRRYLNARATLGELLRLGALPVINENDTVSVDELK-------LGDNDNLAAIVAALVDADALFIATDIDGLYSADPRSNPLARPLDDVPELTPEVLAMAGGSGSNVGTGGMRTKLEAAAKAGAAGIETYLFNG 227          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SALRD (Glutamate 5-kinase OS=Salinibacter ruber (strain DSM 13855) GN=proB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11
Identity = 66/214 (30.84%), Postives = 93/214 (43.46%), Query Frame = 2
Query:   47 QGFEIILVSSGAVGVG-RQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSR-VGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            QG E+ILVSSGAV  G  ++ R       S+ + Q         A AA+GQ  LMA +  LF   DV  +Q+L+T  D +         +T+  LLD   +PI NEND V+T +           DND+                 SDV+GLY+  P  +P+++ +        +     G   R V  GGM  KV         GI  V+ +G
Sbjct:   46 QGKEVILVSSGAVAAGLAEQGRGGPGTGLSIPERQ---------ALAALGQPLLMAHWRRLF---DVPCAQVLLTYDDLQRRARFVNAKNTIAELLDRDTLPIVNENDTVATEELR-------VGDNDNLAAYVAVLAEADLLVICSDVDGLYTADPHDDPDAERLPAVDAITDEIYDMVGPSHRKVATGGMQTKVEAAEKATDRGIDTVLVNG 240          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_XYLFM (Glutamate 5-kinase OS=Xylella fastidiosa (strain M12) GN=proB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 60/218 (27.52%), Postives = 94/218 (43.12%), Query Frame = 2
Query:   50 GFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV-GRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            G ++++VSSGAV  GR  +        +LA  Q         A AA+GQ+ L+AL+   F   D   +Q+L+T  D R+         T++ LL L  +P+ NEND VS  +           DND+                 +D++GLY + P   P+++ +H       +     GD S   G GGM  K+         GI   + +G + D +
Sbjct:   56 GRQLVIVSSGAVAAGRALIPPLPESGGALAARQ---------ALAALGQAQLIALWQRFF---DRPVAQVLLTHDDLRNRRRYLNARATLRELLHLGTLPVVNENDTVSVDELK-------LGDNDNLAAIVAALIDAQALFIATDIDGLYTTDPRHHPDAQPLHEVRTLTPEHLAMAGDSSSTGGTGGMRTKLEAALKAGAAGIDTYLFNGRSSDVV 254          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_XANOR (Glutamate 5-kinase OS=Xanthomonas oryzae pv. oryzae GN=proB PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11
Identity = 61/212 (28.77%), Postives = 91/212 (42.92%), Query Frame = 2
Query:   50 GFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQA-EITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            G E+++VSSGAV  GR  L     V + +A  Q         A AA+GQ+ L+AL+   F +     +Q+L+T  D R+         T+  LL L  +P+ NEND VS  +           DND+                 +D++GLYS  P S P ++ +        +   +  G  S VG GGM  K+         GI   + +G
Sbjct:   35 GRELVIVSSGAVAAGRAILPKAVDVGAPIAARQ---------ALAALGQAQLIALWQRFFER---PVAQVLLTHDDLRNRRRYLNARATLGELLRLGALPVINENDTVSVDELK-------LGDNDNLAAIVAALVDADALFIATDIDGLYSADPRSNPLARPLDDVPELTPEVLAMAGGSGSNVGTGGMRTKLEAAAKAGAAGIETYLFNG 227          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_XYLFT (Glutamate 5-kinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=proB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 60/218 (27.52%), Postives = 94/218 (43.12%), Query Frame = 2
Query:   50 GFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITFGD-KSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            G ++++VSSGAV  GR  +        +LA  Q         A AA+GQ+ L+AL+   F   D   +Q+L+T  D R+         T++ LL L  +P+ NEND VS  +           DND+                 +D++GLY + P    +++ +H       +     GD  S VG GGM  K+         GI   + +G + D +
Sbjct:   56 GRQLVIVSSGAVAAGRALIPPLPESGGALAARQ---------ALAALGQAQLIALWQRFF---DRPVAQVLLTHDDLRNRRRYLNARATLRELLHLGTLPVVNENDTVSVDELK-------LGDNDNLAAIVAALIDAQALFIATDIDGLYTTDPRHHSDAQPLHEVRTLTPENLAMAGDSSSTVGTGGMRTKLEAALKAGAAGIDTYLFNGRSSDVV 254          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_XYLF2 (Glutamate 5-kinase OS=Xylella fastidiosa (strain M23) GN=proB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 60/218 (27.52%), Postives = 94/218 (43.12%), Query Frame = 2
Query:   50 GFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITFGD-KSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            G ++++VSSGAV  GR  +        +LA  Q         A AA+GQ+ L+AL+   F   D   +Q+L+T  D R+         T++ LL L  +P+ NEND VS  +           DND+                 +D++GLY + P    +++ +H       +     GD  S VG GGM  K+         GI   + +G + D +
Sbjct:   56 GRQLVIVSSGAVAAGRALIPPLPESGGALAARQ---------ALAALGQAQLIALWQRFF---DRPVAQVLLTHDDLRNRRRYLNARATLRELLHLGTLPVVNENDTVSVDELK-------LGDNDNLAAIVAALIDAQALFIATDIDGLYTTDPRHHSDAQPLHEVRTLTPENLAMAGDSSSTVGTGGMRTKLEAALKAGAAGIDTYLFNGRSSDVV 254          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_XANAC1.688e-1128.77Glutamate 5-kinase OS=Xanthomonas axonopodis pv. c... [more]
PROB_SALRD1.688e-1130.84Glutamate 5-kinase OS=Salinibacter ruber (strain D... [more]
PROB_XYLFM2.204e-1127.52Glutamate 5-kinase OS=Xylella fastidiosa (strain M... [more]
PROB_XANOR2.204e-1128.77Glutamate 5-kinase OS=Xanthomonas oryzae pv. oryza... [more]
PROB_XYLFT6.413e-1127.52Glutamate 5-kinase OS=Xylella fastidiosa (strain T... [more]
PROB_XYLF26.413e-1127.52Glutamate 5-kinase OS=Xylella fastidiosa (strain M... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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