FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURCM (Glutamate 5-kinase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=proB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 72/230 (31.30%), Postives = 109/230 (47.39%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++ D+ ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL++  P  +PN+ L+      A     +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQSGLFTADPRKDPNATLVAEASAGAPDLEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGRETD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_BURA4 (Glutamate 5-kinase OS=Burkholderia ambifaria (strain MC40-6) GN=proB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 72/230 (31.30%), Postives = 109/230 (47.39%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLI-HTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMD 691
            +G    Q+  L +QG E++LVSSGA+  G QRL + K          +P+   + +A AAVGQ  L  +Y++ F++ D+ ++Q+L+T +D  D +       T+ +LL L V+PI NEND V T +         F DND+                 +D  GL++  P  +PN+ L+      A     +  G  S +GRGGM  K+         G   VI SG   D
Sbjct:   32 IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSK----------RPREIDELQAAAAVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIK-------FGDNDTLGALVANLIEGDALIILTDQSGLFTADPRKDPNATLVAEASAGAPDLEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASGRETD 244          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SALPK (Glutamate 5-kinase OS=Salmonella paratyphi A (strain AKU_12601) GN=proB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GL++  P S P ++LI              GD  S +G GGM+ K+         GI  +I SG
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSVAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIASG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SALPA (Glutamate 5-kinase OS=Salmonella paratyphi A GN=proB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GL++  P S P ++LI              GD  S +G GGM+ K+         GI  +I SG
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHIGQMLLTRADMEDRERFLNARDTLRALLDNHIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQQGLFTADPRSNPQAELIKDVYGVDDALRSVAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIASG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_PASMU (Glutamate 5-kinase OS=Pasteurella multocida GN=proB PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 66/223 (29.60%), Postives = 108/223 (48.43%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYS-GPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            ++ QL +L+  GF +++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   Q+L+T +D  D +      DT+++LLD ++IP+ NENDAV+T +           DND+                 +D +GL+   P   P++KLI    +   H   I  G  + +G GGM+ K++        GI  +I  G
Sbjct:   31 IVRQLAQLHQAGFRLVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQTWEKLFAIYDIHIGQILLTRADIEDRERFLNARDTLRALLDNQIIPVINENDAVATSEIK-------VGDNDNLSALVAILVQAEQLYLLTDQQGLFDRDPRKHPDAKLIADVDKITDHIRAIAGGSGTSLGTGGMSTKISAADVATRSGIETIIAPG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_NEIMF (Glutamate 5-kinase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=proB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 71/234 (30.34%), Postives = 106/234 (45.30%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            G++  +  QL  L+  G E++LVSSGAV  G   L ++K          +P    D +A AAVGQ  LM  Y    S   + S+Q+L++ +DF D+   +     +  LL  R +PI NEND VS  +           DND+                 +D++GLY+G P S P++  +       H+  E+  G  S  G GGM  K+         G+PV I S    D++
Sbjct:   25 GKIQTITRQLAALHHAGHELVLVSSGAVAAGFGALGFKK----------RPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELK-------IGDNDTLSAQVAAMIQADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIKAATIAAESGVPVYICSSLKPDAL 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_NEIMA (Glutamate 5-kinase OS=Neisseria meningitidis serogroup A GN=proB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 71/234 (30.34%), Postives = 106/234 (45.30%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSG-PPSEPNSKLIHTYIRAKHQ-AEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSGFAMDSI 697
            G++  +  QL  L+  G E++LVSSGAV  G   L ++K          +P    D +A AAVGQ  LM  Y    S   + S+Q+L++ +DF D+   +     +  LL  R +PI NEND VS  +           DND+                 +D++GLY+G P S P++  +       H+  E+  G  S  G GGM  K+         G+PV I S    D++
Sbjct:   25 GKIQTITRQLAALHHAGHELVLVSSGAVAAGFGALGFKK----------RPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILLSRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELK-------IGDNDTLSAQVAAMIQADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIKAATIATESGVPVYICSSLKPDAL 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_HAEIN (Glutamate 5-kinase OS=Haemophilus influenzae GN=proB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 68/223 (30.49%), Postives = 105/223 (47.09%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIR-AKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            ++ Q+ +L++ GF I++V+SGA+  GR  L + +L          P      +  AAVGQS L+  ++ LF+  D+   QLL+T +D  D +      DT+ +LLD  +IP+ NENDAV+T +           DND+                 +D +GL+ S P   P +KLI    +   H   I  G  + +G GGM  K+         GI  +I  G
Sbjct:   30 IVRQIAQLHNDGFRIVIVTSGAIAAGRHYLNHPQL----------PPTIASKQLLAAVGQSQLIQAWEKLFAIYDIHIGQLLLTRADIEDRERFLNARDTLYALLDNHIIPVINENDAVATAEIK-------VGDNDNLSALVAILVQAEQLYLLTDQQGLFDSDPRKNPEAKLIPVVEQITDHIRSIAGGSGTNLGTGGMMTKIIAADVATRSGIETIIAPG 235          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_GEOLS (Glutamate 5-kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=proB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 71/226 (31.42%), Postives = 107/226 (47.35%), Query Frame = 2
Query:    8 LGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYS-GPPSEPNSKLIHTYIRAKHQAE-ITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +  L +++  L  QG E+ILVSSGAV  GR  LR      S+   L  PQ +    A AAVGQ  LM  Y    ++  + ++Q+L+T  D  + +       T+++LL    +P+ NEND+V+  +         F DND+                 +D+EGLYS  P S+P+++LI        + E +  G  S VG GGM  KV         G+P ++  G
Sbjct:   33 ISRLCDEMAGLRQQGIEVILVSSGAVAAGRDALR------SADTTLTIPQKQ----AAAAVGQPLLMQAYQQACTRHGLVTAQILLTAEDLANRNRFLNARTTLEALLTAGALPVINENDSVAVAEIK-------FGDNDNLSALVTSLAEADLLLILTDIEGLYSANPASDPDAELIPLVRSITREIERMAGGSGSNVGTGGMATKVTAAKKAARFGVPTILAPG 241          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_SHISS (Glutamate 5-kinase OS=Shigella sonnei (strain Ss046) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_BURCM1.166e-2031.30Glutamate 5-kinase OS=Burkholderia ambifaria (stra... [more]
PROB_BURA41.166e-2031.30Glutamate 5-kinase OS=Burkholderia ambifaria (stra... [more]
PROB_SALPK1.523e-2030.49Glutamate 5-kinase OS=Salmonella paratyphi A (stra... [more]
PROB_SALPA1.523e-2030.49Glutamate 5-kinase OS=Salmonella paratyphi A GN=pr... [more]
PROB_PASMU1.523e-2029.60Glutamate 5-kinase OS=Pasteurella multocida GN=pro... [more]
PROB_NEIMF1.523e-2030.34Glutamate 5-kinase OS=Neisseria meningitidis serog... [more]
PROB_NEIMA1.523e-2030.34Glutamate 5-kinase OS=Neisseria meningitidis serog... [more]
PROB_HAEIN1.523e-2030.49Glutamate 5-kinase OS=Haemophilus influenzae GN=pr... [more]
PROB_GEOLS1.523e-2031.42Glutamate 5-kinase OS=Geobacter lovleyi (strain AT... [more]
PROB_SHISS1.989e-2030.49Glutamate 5-kinase OS=Shigella sonnei (strain Ss04... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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