FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:155..852. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECOLC (Glutamate 5-kinase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECOL6 (Glutamate 5-kinase OS=Escherichia coli O6 GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECOL5 (Glutamate 5-kinase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECOK1 (Glutamate 5-kinase OS=Escherichia coli O1:K1 / APEC GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECOHS (Glutamate 5-kinase OS=Escherichia coli O9:H4 (strain HS) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECODH (Glutamate 5-kinase OS=Escherichia coli (strain K12 / DH10B) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECOBW (Glutamate 5-kinase OS=Escherichia coli (strain K12 / BW2952) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO8A (Glutamate 5-kinase OS=Escherichia coli O8 (strain IAI1) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO81 (Glutamate 5-kinase OS=Escherichia coli O81 (strain ED1a) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
[Close]
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO7I (Glutamate 5-kinase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2 
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_ECOLC1.989e-2030.49Glutamate 5-kinase OS=Escherichia coli (strain ATC... [more]
PROB_ECOL61.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O6 GN=proB ... [more]
PROB_ECOL51.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O6:K15:H31 ... [more]
PROB_ECOK11.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O1:K1 / APE... [more]
PROB_ECOHS1.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O9:H4 (stra... [more]
PROB_ECODH1.989e-2030.49Glutamate 5-kinase OS=Escherichia coli (strain K12... [more]
PROB_ECOBW1.989e-2030.49Glutamate 5-kinase OS=Escherichia coli (strain K12... [more]
PROB_ECO8A1.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O8 (strain ... [more]
PROB_ECO811.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O81 (strain... [more]
PROB_ECO7I1.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O7:K1 (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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