FC931684

Overview
NameFC931684
Unique NameFC931684
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO5E (Glutamate 5-kinase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO57 (Glutamate 5-kinase OS=Escherichia coli O157:H7 GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO55 (Glutamate 5-kinase OS=Escherichia coli (strain 55989 / EAEC) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO45 (Glutamate 5-kinase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO27 (Glutamate 5-kinase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ECO24 (Glutamate 5-kinase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 68/223 (30.49%), Postives = 106/223 (47.53%), Query Frame = 2
Query:   17 LLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK-SRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            L+ Q  +L++ G  I++V+SGA+  GR+ L Y +L          P      +  AAVGQS L+ L++ LFS   +   Q+L+T +D  D +      DT+++LLD  ++P+ NENDAV+T +           DND+                 +D +GLY+  P S P ++LI              GD  S +G GGM+ K+         GI  +I +G
Sbjct:   31 LVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPEL----------PATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIK-------VGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAG 236          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_CORDI (Glutamate 5-kinase OS=Corynebacterium diphtheriae GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 67/225 (29.78%), Postives = 105/225 (46.67%), Query Frame = 2
Query:    2 GRLGALLEQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNXXXXXXXXGIPVVITS 676
            GR+  ++E L++   +G ++I+VSSGAV  G           + L    +P++    +A A+VGQ  L   +   F++ + T  Q+L+T SD    D  +    T+  L  L  +PI NEND V+T       S   F DND                  SDV+GLY   P++P+++ +           +  GD   VG GGM +KV+        G+PV++TS
Sbjct:   39 GRIDRIVEALEDRMHRGSDVIVVSSGAVAAGM----------APLGLTSRPKDLATKQAAASVGQVHLANAWGNSFARYNRTIGQVLLTASDAGQRDRARNAQRTIDRLRLLHAVPIINENDTVAT-------SEMHFGDNDRLAAIVSHLVSADALVLLSDVDGLYDKNPADPSARFVSEVRDGNDLKGVIAGDGGAVGTGGMASKVSAARLASRSGVPVLLTS 246          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ACIBY (Glutamate 5-kinase OS=Acinetobacter baumannii (strain AYE) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++     + ++Q+L+T  D  D        D +Q+L+D RVIP+ NEND VST +         F DND+                 +D +G++ S P   P++KL+ T +RA         G    +GRGGM  KV         G P +I SG
Sbjct:   43 KQIADLHNAGHEIILVSSGAVAEGMVRMK----LASRPTDLPSLQ------ACAAIGQMGLIHTWSSVLENHSIRTAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVSTDEIR-------FGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRHNPDAKLLST-VRAMDDVLFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPTLIASG 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ACIBT (Glutamate 5-kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=proB PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++     + ++Q+L+T  D  D        D +Q+L+D RVIP+ NEND VST +         F DND+                 +D +G++ S P   P++KL+ T +RA         G    +GRGGM  KV         G P +I SG
Sbjct:   43 KQIADLHNAGHEIILVSSGAVAEGMVRMK----LASRPTDLPSLQ------ACAAIGQMGLIHTWSSVLENHSIRTAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVSTDEIR-------FGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRHNPDAKLLST-VRAMDDVLFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPTLIASG 245          
BLAST of FC931684 vs. ExPASy Swiss-Prot
Match: PROB_ACIBS (Glutamate 5-kinase OS=Acinetobacter baumannii (strain SDF) GN=proB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2
Query:   23 EQLKELNSQGFEIILVSSGAVGVGRQRLRYRKLVNSSLADLQKPQNELDGKACAAVGQSSLMALYDTLFSQLDVTSSQLLVTDSDFRDEDFRKQLYDTVQSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSXXXXXXXXXXXXXXXXXSDVEGLY-SGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRVGRGGMTAKVNXXXXXXXXGIPVVITSG 679
            +Q+ +L++ G EIILVSSGAV  G  R++    + S   DL   Q      ACAA+GQ  L+  + ++     + ++Q+L+T  D  D        D +Q+L+D RVIP+ NEND VST +         F DND+                 +D +G++ S P   P++KL+ T +RA         G    +GRGGM  KV         G P +I SG
Sbjct:   43 KQIADLHNAGHEIILVSSGAVAEGMVRMK----LASRPTDLPSLQ------ACAAIGQMGLIHTWSSVLENHSIRAAQVLLTHDDLADRRRYLNSCDALQNLIDWRVIPVINENDTVSTDEIR-------FGDNDTLAAMVAGQVHADLLIILTDQQGMFDSDPRHNPDAKLLST-VRATDDVLFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPTLIASG 245          
The following BLAST results are available for this feature:
BLAST of FC931684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 446
Match NameE-valueIdentityDescription
PROB_ECO5E1.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O157:H7 (st... [more]
PROB_ECO571.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O157:H7 GN=... [more]
PROB_ECO551.989e-2030.49Glutamate 5-kinase OS=Escherichia coli (strain 559... [more]
PROB_ECO451.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O45:K1 (str... [more]
PROB_ECO271.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O127:H6 (st... [more]
PROB_ECO241.989e-2030.49Glutamate 5-kinase OS=Escherichia coli O139:H28 (s... [more]
PROB_CORDI1.989e-2029.78Glutamate 5-kinase OS=Corynebacterium diphtheriae ... [more]
PROB_ACIBY1.989e-2033.03Glutamate 5-kinase OS=Acinetobacter baumannii (str... [more]
PROB_ACIBT1.989e-2033.03Glutamate 5-kinase OS=Acinetobacter baumannii (str... [more]
PROB_ACIBS1.989e-2033.03Glutamate 5-kinase OS=Acinetobacter baumannii (str... [more]

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Properties
Property NameValue
Genbank descriptionC34107H03EF PostHarvP1 Citrus clementina cDNA clone C34107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931684 ID=FC931684; Name=FC931684; organism=Citrus clementina; type=EST; length=698bp
GGGAAGGCTTGGAGCTCTTTTAGAGCAGCTTAAGGAGTTAAATTCTCAAG
GCTTTGAGATTATTTTAGTTTCTTCAGGCGCTGTTGGTGTTGGCCGCCAA
AGGCTTAGATACAGAAAATTGGTCAATAGCAGCTTGGCTGATCTCCAAAA
GCCGCAGAATGAGCTTGATGGGAAGGCTTGTGCCGCAGTTGGGCAGAGTA
GTCTCATGGCTCTTTATGATACCTTGTTCAGCCAGCTTGATGTGACCTCA
TCCCAACTTCTTGTGACGGATAGTGATTTTAGGGATGAAGATTTCAGAAA
GCAACTCTATGACACTGTTCAATCATTGTTAGATTTGAGGGTTATTCCTA
TTTTTAATGAAAATGACGCAGTTAGTACTAGGAAAGCACCATACGAGGAT
TCTTCTGGTATATTTTGGGATAATGACAGTCTGGCAGGATTATTGGCTTT
GGAACTAAAAGCTGATCTTCTTGTTCTGTTGAGTGATGTAGAGGGCCTCT
ATAGTGGTCCTCCAAGTGAGCCAAATTCGAAGCTGATCCATACATATATA
AGAGCAAAACACCAAGCAGAAATAACATTTGGAGACAAGTCAAGGGTTGG
AAGAGGGGGAATGACTGCTAAGGTCAATGCAGCTTATTGTGCAGCTTGCG
CCGGTATCCCTGTTGTTATTACTAGTGGCTTTGCCATGGACAGCATCA
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