FC931694

Overview
NameFC931694
Unique NameFC931694
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931694 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 53/205 (25.85%), Postives = 94/205 (45.85%), Query Frame = 3 
Query:    3 EIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESI-DFQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNGKGDLIDVLLS 614
            ++  D   T+D   A R    +   +         APYG+YWR+++ + T  LLS+  ++  +  R  E+   ++ L     E + + + V +SKLI  +  +I  K++ GK++S    EE   +   I ++  +A    G+  +G+ IP L  I    G  G ++   K+  D I   L+EH       E      D +D+LL+
Sbjct:   83 DVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL----EEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSG---EEGTIDVKTITKSFLDAV---GLSPVGEYIPSLAWIGKITGSDGKLEKITKQFGDFIEKVLQEHEDTTADKE----TPDFVDMLLT 273
The following BLAST results are available for this feature:
BLAST of FC931694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
C71AG_ARATH8.658e-1125.85Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC34108A01EF PostHarvP1 Citrus clementina cDNA clone C34108A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931694 ID=FC931694; Name=FC931694; organism=Citrus clementina; type=EST; length=712bp
GGGAAATTGTGAAGGATTGCTTCACTACCAATGACAGAATTCTGGCTACA
AGGGCAAAAATTGTAGCAGGCAAGTATATGGGTTATGACAACGCCATTTT
TGCACTTGCTCCCTACGGTCAGTACTGGCGTGATATTCGCAAAATAGCCA
CCACAGAGCTTCTCTCAAGTCACCGGCTTGAATTGCTGAAGCACGTTCGC
TACTCTGAAGTTGACACTTTCATCAAAGATTTGTACTCACTTTGCTCAGA
AAACGCATTCAATCCTGCGAAGGTGGTGATCAGCAAGTTAATCGAGCAGT
TAACTTTCAATATAAGCCTGAAACTGATAGCTGGGAAGCGATTTTCAGCT
AAAGATTATGAGGAACAAGGCAGCGAGGCTTGGCGTATCAATAGAGCAAT
AAAAGAAGCAACGCACCTATTCGGGGTTTTCGTCTTGGGAGATGCCATAC
CATGGCTTGAATCGATTGACTTTCAGGGTCATGTGGGATCTATGAAGAGT
ACTGCTAAGGAAATTGACGATGTGATCGGCAACTGGCTTAAAGAACATCT
TCAAAAAAAATTACAGGGCGAAGGCCATAATGGTAAAGGTGACCTCATAG
ACGTGTTGCTTTCAAACTGCAAGAAGATGCTGTGATGGGCGGACATACAC
GTGATATTGTCGTCAAAGCAACAGCTCTAATTTTAATCCTCACAGGCTCA
GAAAGCACGTAT
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