FC931696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27 Identity = 75/235 (31.91%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 2 EIMRQSAS-DLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLDNDIDGIVE---LTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKE 694 E++R++ + D KK L + F GED +D GG+ +EFF L+ E+ +P Y +F Y S E + F IG + GLAI++ +D F A YK +L+KK SL D++ + D+ R++ LD D I E L F++ E FG +L+ G D V +N+ ++++ ++ K V FDAF +GF+++ ++ +F EL+ ++ G + DWKE Sbjct: 724 EVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIW----FSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKKLLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNY---DWKE 951
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.920e-26 Identity = 73/221 (33.03%), Postives = 124/221 (56.11%), Query Frame = 2 Query: 62 EDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKK-----VSLQDMEGVDEDLHRNLAWT--LDNDIDGIVELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGG-IADIDVEDWKEHT 700 E G+D G+ +EF + +F+P LF+ ++ D L +P S ++ +L F+F+G+++G A++ +D F F +L S+ ++ +D + ++NL D DI + LT S D++ G+ +LIPGG+ IPVTNENK YI L+ +++ +++ Q A +SGF +I P+ + +F EL+ LI G A+ID+ED K+HT Sbjct: 722 EAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDE-RLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDITDL-GLTLSYDEDVMGQLVCHELIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHT 940
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.920e-26 Identity = 74/235 (31.49%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 2 EIMRQSAS-DLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLDNDIDGIVE---LTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKE 694 E++R++ + D KK L + F GED +D GG+ +EFF L+ E+ +P Y +F Y S E + F IG + GLAI++ +D F A YK +L++K SL D++ + D+ R++ LD D I E L F++ E FG +L+ G D V +N+ ++++ ++ K V FDAF +GF+++ ++ +F EL+ ++ G + DWKE Sbjct: 724 EVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIW----FSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNY---DWKE 951
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: UBE3B_XENTR (Ubiquitin-protein ligase E3B OS=Xenopus tropicalis GN=ube3b PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 75/246 (30.49%), Postives = 136/246 (55.28%), Query Frame = 2 Query: 2 EIMRQSASDLKKRLMIKFDG-----EDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSL-----QDMEGVDEDLHRNLAWT--LDNDIDGIVELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGG-IADIDVEDWKEHT 700 ++ + S + +K + +KF E G+D G+ +EF + +F+P LF+ ++ + L +P S ++ +L F+F+G+++G A++ +D F F +L S+ ++ +D + ++NL D DI + LT S D++ G+ +L+PGG+ IPVTNENK YI L+ +++ +++ Q AF+SGF +I P+ + +F EL+ LI G A+ID++D K+HT Sbjct: 701 QLRQLSQNAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSSGD-RLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRYDGDISDL-GLTLSYDEDVMGQLVCHELVPGGKSIPVTNENKISYIHLMAHFRMHTQIKNQTVAFISGFRSIIRPEWIRMFSAPELQRLISGDNAEIDLDDLKKHT 944
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 77/250 (30.80%), Postives = 132/250 (52.80%), Query Frame = 2 Query: 2 EIMRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDME---GVDEDLHRNLAWTLDNDIDGIVEL-------------TFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKEHTR 703 E+ R+ A DLKK+L + F GE GLD GGL++E+F LL ++F+P Y +F Y + + S ++ + F+ +G ++GLA+++ LD F YK +L V D G+ +L + G+ EL TF V E+FG ++ +L PGG IPVTN+N+ +Y++L T++ + K + +QF AF GF+ + + + + E+E+L+ G ++D+ + T+ Sbjct: 431 ELTRKRA-DLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSH----CHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSYEGNVEEDFYSTFQVFQEEFGVIKSYNLKPGGDKIPVTNQNRREYVQLYTDFLLNKSIYKQFAAFYCGFHSVCASNALMLLRPEEVEILVCGSPELDMHALQRSTQ 675
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: UBE3B_MOUSE (Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ube3b PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26 Identity = 72/221 (32.58%), Postives = 124/221 (56.11%), Query Frame = 2 Query: 62 EDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKK-----VSLQDMEGVDEDLHRNLAWT--LDNDIDGIVELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGG-IADIDVEDWKEHT 700 E G+D G+ +EF + +F+P LF+ ++ D L +P S ++ +L F+F+G+++G A++ +D F F ML S+ ++ +D + ++NL D DI + LT S D++ G+ +L+PGG+ IPVT+ENK YI L+ +++ +++ Q A +SGF +I P+ + +F EL+ LI G A+ID+ED K+HT Sbjct: 724 EAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDE-RLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQMLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDIADL-GLTLSYDEDVMGQLVCHELVPGGKTIPVTDENKISYIHLMAHFRMHTQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHT 942
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26 Identity = 76/234 (32.48%), Postives = 124/234 (52.99%), Query Frame = 2 Query: 2 EIMRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLD---NDIDGIVELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKE 694 E+ S DLKK L + FDGE+ +D GG+++EFF LL E+ NP Y +F Y D+ L + V EH N+F IG GLAI++ +D F A YK +L K L+D++ + R+L LD D++ L F++ E +G LIPGG ++ V +N+ ++++ + V E + AF SGF ++ ++ +F EL ++ G ++ + E+ +E Sbjct: 718 ELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTY-YQDSNLLWFSDTCFV--EH-NWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNFTICRESYGVIEQKKLIPGGDNVTVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEELEE 947
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 78/252 (30.95%), Postives = 136/252 (53.97%), Query Frame = 2 Query: 2 EIMRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRK--------------KVSLQDMEGVDEDLHRNLAWTLDNDIDGIVE----LTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKEHTR 703 E+ R+ A DLKK+L + F GE GLD GGL++E+F LL ++F+P Y +F Y + + S ++ + F+ +G ++GLA+++ LD F YK +L V++ D+ + +L L+ L ++ G VE TF V E+FG ++ +L PGG I VTN+N+ +Y++L T++ + K + +QF AF GF+ + + + + E+E+L+ G D+D+ + T+ Sbjct: 433 ELTRKRA-DLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSH----CHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICSVTVDDLCQIMPELAHGLSELLSHE--GNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQ 677
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 78/252 (30.95%), Postives = 136/252 (53.97%), Query Frame = 2 Query: 2 EIMRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRK--------------KVSLQDMEGVDEDLHRNLAWTLDNDIDGIVE----LTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKEHTR 703 E+ R+ A DLKK+L + F GE GLD GGL++E+F LL ++F+P Y +F Y + + S ++ + F+ +G ++GLA+++ LD F YK +L V++ D+ + +L L+ L ++ G VE TF V E+FG ++ +L PGG I VTN+N+ +Y++L T++ + K + +QF AF GF+ + + + + E+E+L+ G D+D+ + T+ Sbjct: 433 ELTRKRA-DLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSH----CHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHE--GNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQ 677
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: UBE3A_MOUSE (Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ube3a PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25 Identity = 78/236 (33.05%), Postives = 129/236 (54.66%), Query Frame = 2 Query: 5 IMRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTL--DNDIDGIVELTFSVDD-EKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELI-PPDLVNVFDERELELLIGGIADIDVEDWKEHT 700 I ++ +DLKK+L ++F+GE G+D GG+S+EFF L+ E+FNP +F Y NP S E F IG ++GLAI++ LD F Y+ ++ KK + +D+ L+++L L + ++ + +TF + + FG DL G IP+TNEN+ +++ +++ + K VE+QF AF GF+ + L +F E+ELLI G ++D + +E T Sbjct: 554 IAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYD-EATKLFWFNPSSF---ETEGQFTLIG-ILGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGSVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVISYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETT 784 The following BLAST results are available for this feature:
BLAST of FC931696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931696 ID=FC931696; Name=FC931696; organism=Citrus clementina; type=EST; length=711bpback to top |