FC931696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25 Identity = 73/235 (31.06%), Postives = 123/235 (52.34%), Query Frame = 2 Query: 2 EIMRQSAS-DLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLDNDIDGIVE---LTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKE 694 E++R++ + D KK L + F GED +D GG+ +EFF L+ E+ +P Y +F Y S E + F IG + GLAI++ +D F A YK +L++K SL D++ + + R++ LD D I E L F++ E FG +L+ G D V +N+ ++++ ++ K V FDAF +GF+++ ++ +F EL+ ++ G + DWKE Sbjct: 724 EVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIW----FSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPAVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNRQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNY---DWKE 951
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: MUG30_SCHPO (Probable E3 ubiquitin-protein ligase mug30 OS=Schizosaccharomyces pombe GN=mug30 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.376e-24 Identity = 67/224 (29.91%), Postives = 121/224 (54.02%), Query Frame = 2 Query: 26 DLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTL--DNDIDGIVELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWK 691 D +K L ++F GE+G+D GGL RE+ LL+ ++F+P + LF + L N + ++Y+ G ++G+AI + LD AFYK +L+ +S D++ L+R L L + D+ L F+++ + RT++L GG ++ V NEN+ +Y+ ++ + V++QF AF GF ++ + +++F + E+ LI G +V DW+ Sbjct: 456 DFRKALKVEFLGEEGIDAGGLKREWLLLLTRKVFSPEFGLFVNCEESSNYLWFNYSH--RSKEIDYYHMSGILMGIAIHNSINLDVQMPRAFYKKLLQLPLSFNDLDDFQPSLYRGLKELLLFEGDVKNTYGLNFTINLKAVEGFRTVELKEGGSELSVDNENRKEYVLRYVDYLLNTTVKKQFSAFFDGFMKVCGGNAISLFQDNEISKLIRG--SEEVIDWE 675
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24 Identity = 77/248 (31.05%), Postives = 127/248 (51.21%), Query Frame = 2 Query: 8 MRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYT-LQINP-----HSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTL---DNDIDGIVELTFSV----------DDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPP-DLVNVFDERELELLIGGIADIDVEDWK 691 +++ DL K L I+F E G+D GGL +E+FFLL+ +FNP LF Y + + I+P G N + Y+ F G V+GLAIF+ LD F A YK + + +S +D + + RNL L +++ + + LTF D + E T++L GR++P+T NK +++ E+ + K +E Q++ F+SGF + + + +F+ ELE L+ G + D+K Sbjct: 538 IKEHQGDLLKSLRIEFVNEPGIDAGGLRKEWFFLLTKSLFNPMNGLFIYIKESSRSWFAIDPPNFDKSKGKNSQLELYYLF-GVVMGLAIFNSTILDLQFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTYRNNNWILNDSKSSKEYVTVELCENGRNVPITQSNKHEFVMKWVEFYLEKSIEPQYNKFVSGFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFK 784
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HERC5_HUMAN (Probable E3 ubiquitin-protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 69/227 (30.40%), Postives = 112/227 (49.34%), Query Frame = 2 Query: 26 DLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEY-SAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLDNDIDGIVELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKEHTR 703 DL+K L + F GE G D GG+ +EFF+ L EM P Y +F Y + P E YF F G + GL++F+ + F A +K +L + SL+D++ + DL +NL LD++ D E+ F + +R +LIP G I V NK Y+ + V+ ++ F GF ++ D++ +F EL+ +I G D D + ++++ R Sbjct: 705 DLRKELWVSFSGEIGYDLGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKF----EKKRYF-FFGVLCGLSLFNCNVANLPFPLALFKKLLDQMPSLEDLKELSPDLGKNLQTLLDDEGDNFEEV-FYIHFNVHWDRNDTNLIPNGSSITVNQTNKRDYVSKYINYIFNDSVKAVYEEFRRGFYKMCDEDIIKLFHPEELKDVIVGNTDYDWKTFEKNAR 925
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HUL5_YEAST (Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae GN=HUL5 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 74/225 (32.89%), Postives = 116/225 (51.56%), Query Frame = 2 Query: 50 KFDGEDGLDYGGLSREFFFLLSHEMF-NPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKK----VSLQDMEGVDEDLHRNLAWTLDNDIDGI--VELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIAD-IDVEDWKEHT 700 +F E G+D GG+++EF +S E F +P + LF +D Y L P + L Y F+G+VVG ++ +D F F K +L S D+ D L+ NL L+ D I ++LTF +D+ + + +DLIP G VT +N Y+ VT++K+ KR + AF G + +I P + +F+ EL++LI G D ID++D K +T Sbjct: 589 EFGEEAGIDGGGITKEFLTTVSDEGFKDPKHELFR--TNDRYELY--PSVVYDATKLKYIWFLGKVVGKCLYEHVLIDVSFADFFLKKLLNYSNGFLSSFSDLGSYDSVLYNNLIKLLNMTTDEIKSLDLTFEIDEPE-SSAKVVDLIPNGSKTYVTKDNVLLYVTKVTDYKLNKRCFKPVSAFHGGLSVIIAPHWMEMFNSIELQMLISGERDNIDLDDLKSNT 808
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21 Identity = 69/241 (28.63%), Postives = 126/241 (52.28%), Query Frame = 2 Query: 14 QSASDLKKRLMIKFDG-----EDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSG--VNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKK--VSLQDMEGVDEDLHRNLAW--TLDNDIDGIVELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGI-ADIDVEDWKEHT 700 ++ DLKKR+ + E G+D GG+ REF L FNP F+ + + L NP + V ++ F+GR++G A++ ++ F G F +L V + + +D +++RNL + + + D++ + L F+V + GE + ++L GG+DIPVT N+ YI LV ++++ K++ AF G ++ + + +FD++E+++LI G + +ED K T Sbjct: 743 ENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFKTT--NEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYRNLLFLKSYEEDVEEL-GLNFTVVNNDLGEAQVVELKFGGKDIPVTGANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPVSLEDLKSFT 980
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21 Identity = 68/241 (28.22%), Postives = 129/241 (53.53%), Query Frame = 2 Query: 14 QSASDLKKRLMIKFDG-----EDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSG--VNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKK--VSLQDMEGVDEDLHRNLAW--TLDNDIDGIVELTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGI-ADIDVEDWKEHT 700 ++ DLKKR+ + E G+D GG+ REF L FNP F+ + + L NP + V ++ F+GR++G A++ ++ F G F +L V + + +D ++++NL + + ++D++ + L F+V + GE + ++L GG+DIPVT+ N+ YI LV ++++ +++ + AF G ++ + + +FD++E+++LI G I +ED K T Sbjct: 743 ENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFKTT--NEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSYEDDVEEL-GLNFTVVNNDLGEAQVVELKFGGKDIPVTSANRIAYIHLVADYRLNRQIRQHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFT 980
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 76/252 (30.16%), Postives = 121/252 (48.02%), Query Frame = 2 Query: 8 MRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEY---------SAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLD---NDIDGIVELTFSV------DDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIAD--IDVEDWKEHTR 703 ++ DLKK L I+F E G+D GGL +E+F LL+ ++FNP LF Y S ++ ++ G + E + G V+GLAI++ LD F AFYK + + +S+ D + + N+ L+ D + I LTF D+ K R+ L P G VT ENK +Y L ++ + + + F++F +GF +I + +F ELE L+ G + +DV + TR Sbjct: 494 IQNQQKDLKKSLRIEFVNEPGIDAGGLRKEWFLLLTRDLFNPNNGLFVYVPESRLCWFSIMESIEHELLQGEGSSSE---LYYLFGVVLGLAIYNSTILDLKFPRAFYKKICGEVLSVNDFLELYPETGTNMLKMLEYDGEDFEDIFALTFETCFPDRFDESKIHYRQ---LCPDGSTQAVTRENKHEYFRLWMDFYLNRSIAPGFESFRNGFFHVIEGNSFRLFGSEELEQLVCGSNEQSLDVSMLRSVTR 739
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18 Identity = 67/238 (28.15%), Postives = 116/238 (48.74%), Query Frame = 2 Query: 2 EIMRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYT-LQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLDNDIDGIVE---LTFSVDDEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKEHTR 703 ++ + A+D K L+++F E + GG+S EFF + EM P Y +F Y + P PE YF F G + GL++F+ + F A YK +L +K SL+D++ + L ++L LD+ D I + + FS+ ++ +DLIP G IPV NK Y+ ++ V+ ++ F GF + +++ F EL I G D D + ++++++ Sbjct: 688 QLSQAEATDFCKVLVVEFINEICPESGGVSSEFFHCMFEEMTKPEYGMFMYPEMGSCMWFPAKP----KPEKKRYFLF-GMLCGLSLFNLNVANLPFPLALYKKLLDQKPSLEDLKELSPRLGKSLQEVLDDAADDIGDALCIRFSIH----WDQNDVDLIPNGISIPVDQTNKRDYVSKYIDYIFNVSVKAVYEEFQRGFYRVCEKEILRHFYPEELMTAIIGNTDYDWKQFEQNSK 916
BLAST of FC931696 vs. ExPASy Swiss-Prot
Match: HYD_DROME (E3 ubiquitin-protein ligase hyd OS=Drosophila melanogaster GN=hyd PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15 Identity = 50/174 (28.74%), Postives = 87/174 (50.00%), Query Frame = 2 Query: 209 EHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLDN-------DIDGIVELTFSVD---DEKFGERRTIDLIPGGRDIPVTNENKPQYIELVTEWKIMKRVEEQFDAFMSGFNELIPPDLVNVFDERELELLIGGIADIDVEDWKEHT 700 E +N F+ IGR++GL + L F K +L +K+ D+ D L+ + + N + +EL F +D +E G R +LIPGGRD+ VT+ N +Y+ TE++++K E+ +A G +++P + + +L LL+ G+ DI+V +T Sbjct: 2610 ERINAFRNIGRLIGLCLLQNELLPLFLQRHVLKYILGRKIKFHDLAFFDPALYESFRQIIQNAQTKEGEETINRMELCFVIDLMKEEGCGNR---ELIPGGRDVAVTSSNIFEYVRRYTEYRLIKSQEKALEALKDGVFDVLPDNSMINLTAEDLRLLLNGVGDINVSTLISYT 2780 The following BLAST results are available for this feature:
BLAST of FC931696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931696 ID=FC931696; Name=FC931696; organism=Citrus clementina; type=EST; length=711bpback to top |