FC931699

Overview
NameFC931699
Unique NameFC931699
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: ALST_TAMSI (Alpha-1-antitrypsin-like protein CM55-ST OS=Tamias sibiricus PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.330e-18
Identity = 60/198 (30.30%), Postives = 106/198 (53.54%), Query Frame = 3
Query:   48 DVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFAD-----GSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 626
            + ALS  + +A  ++  +N+ FSP SI   L+++S G+KG T  Q+L  L    D  L   A   +   F +       P+   +L+  NG++ID++L L + F + V ++Y + +   +F T   E  +++N + EK T G + E+L    +D  T L   N ++FKG W + F+  +T++ DFH+    +++VP M
Sbjct:   51 EFALSFYRVLA-RQSNTTNIFFSPVSIATALAMLSLGTKGDTHTQILEGL----DFNLTEMAEADIHQGFQNLLQTLNRPNTQLQLTSGNGLFIDRNLKLLDKFLEDVKSLYHSEAFSTNF-TNTQEARQQINSYVEKGTQGKIVELLK--ELDRDTVLALVNYIFFKGKWKQPFNEEQTREKDFHVDEATTVRVPMM 240          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPB8_HUMAN (Serpin B8 OS=Homo sapiens GN=SERPINB8 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.736e-18
Identity = 56/174 (32.18%), Postives = 87/174 (50.00%), Query Frame = 3
Query:   54 ALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTK 575
            A+SL K +   E    N+ FSP SI   L+++  G+KG T  Q+   L    D  ++     L++ V   G+      L  AN ++ +K+      FK+     Y+A   ++ F     E  + +N W  ++T G + EVL  G+VD  T+L+  NA+YFKG WNE FD   T+
Sbjct:   12 AISLFKILG-EEDNSRNVFFSPMSISSALAMVFMGAKGSTAAQMSQALCLYKDGDIHRGFQSLLSEVNRTGTQY---LLRTANRLFGEKTCDFLPDFKEYCQKFYQAELEELSFAEDTEECRKHINDWVAEKTEGKISEVLDAGTVDPLTKLVLVNAIYFKGKWNEQFDRKYTR 181          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPB13_MOUSE (Serpin B13 OS=Mus musculus GN=Serpinb13 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.736e-18
Identity = 56/195 (28.72%), Postives = 92/195 (47.18%), Query Frame = 3
Query:   81 LTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASE-------------LVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 626
            L +  D N+ FSP  I   + +I  G++G T  +L   L ++   + +   SE             L  ++      S    L ++N ++ +K+      +   V+  Y A+   VDF   A E  +++N W E +TN  VK++ P GS+++ST+L+  N +YFKG W+  F    TK+ DF L    S  V  M
Sbjct:   19 LNKTNDGNVFFSPVGISTAIGMIILGTRGATASELQKVLYTEQGTESSRIKSEEEEIEKREEIHHQLQMLLTEISKFSNDYDLIISNRLFGEKTYLFLQKYIDYVEKYYHASLEPVDFVNAADESRKKINSWVESQTNVKVKDLFPEGSLNSSTKLVLINTVYFKGLWDREFKKEHTKEEDFWLNKNLSKPVQMM 213          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: PAI1_MOUSE (Plasminogen activator inhibitor 1 OS=Mus musculus GN=Serpine1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.736e-18
Identity = 63/222 (28.38%), Postives = 111/222 (50.00%), Query Frame = 3
Query:   12 SMDVRESIS--NQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQ-----LNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSRE---VNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQF 647
            ++ +RES +    TD  + + + V +  +KD N+VFSP  +  +L+++   + G T  Q+   +  K +++     L   + EL+        P     +S A+ +++ + L L   F      +++    QVDF    +EV R    +N W E+ T G++ ++L  G+VD  TRL+  NALYF G W   F  + T    FH  +G ++ VP M ++ N+F
Sbjct:   23 TLPLRESHTAHQATDFGVKVFQQV-VQASKDRNVVFSPYGVSSVLAMLQMTTAGKTRRQIQDAMGFKVNEKGTAHALRQLSKELMG-------PWNKNEISTADAIFVQRDLELVQGFMPHFFKLFQTMVKQVDF----SEVERARFIINDWVERHTKGMINDLLAKGAVDELTRLVLVNALYFSGQWKTPFLEASTHQRLFHKSDGSTVSVPMM-AQSNKF 231          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: NEUS_CHICK (Neuroserpin OS=Gallus gallus GN=SERPINI1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.736e-18
Identity = 59/222 (26.58%), Postives = 105/222 (47.30%), Query Frame = 3
Query:    6 LQSMDVRESISNQTDVALSLTKHVALTEAK-DSNLVFSPSSIHVLLSLISAGSKGPTLDQL---LSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF 659
            L S   + +  ++T   LS+  +  L  A+ D N++F P SI + + +I  G+ G TL ++   L F   K+ ++  TF  +L  +   + S      L++AN +++     +   F Q+V   +KA    +DF   AA V+  +N W E  TN ++K+ +        T L+  NA+YFKG W   F    T+ + F   +   +++P M  +   +   F
Sbjct:   12 LPSKAFKTNFPDETIAELSVNVYNQLRAAREDENILFCPLSIAIAMGMIELGAHGTTLKEIRHSLGFDSLKNGEEF-TFLKDLSDMATTEESHYV---LNMANSLYVQNGFHVSEKFLQLVKKYFKAEVENIDFSQSAA-VATHINKWVENHTNNMIKDFVSSRDFSALTHLVLINAIYFKGNWKSQFRPENTRTFSFTKDDETEVQIPMMYQQGEFYYGEF 228          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: PAI1_PIG (Plasminogen activator inhibitor 1 OS=Sus scrofa GN=SERPINE1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.268e-18
Identity = 58/209 (27.75%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   45 TDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQ-----LNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSRE---VNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQF 647
            TD  + + + V +  +KD N+VFSP  +  +L+++   + G T  Q+   ++ K +++     L     EL+        P     +S A+ +++ + L L   F      +++    QVDF    +E+ R    +N W ++ T G++ ++L  G+VD  TRL+  NALYF G W   F    T    FH  +G ++ VP M ++ N+F
Sbjct:   36 TDFGVKVFRQV-VQASKDRNVVFSPYGVASVLAMLQLTTAGDTQQQIQEAMQFKIEEKGMAPALRQLYKELMG-------PWNKDEISTADAIFVQRDLKLVQGFMPYFFRLFRTTVKQVDF----SEMDRARFIINDWVKRHTKGMINDLLGQGAVDQLTRLVLVNALYFNGQWKTPFPEKSTHHRLFHKSDGSTVSVPMM-AQTNKF 231          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: ILEU_BOVIN (Leukocyte elastase inhibitor OS=Bos taurus GN=SERPINB1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.268e-18
Identity = 62/198 (31.31%), Postives = 95/198 (47.98%), Query Frame = 3
Query:   48 DVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGP-RLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 638
            D+ L+LT+H         N+  SP SI   L+++  G++G T  Q+   L  +  +  + F S     + AD +  G P  L +AN ++ +KS      F      +Y A    VDF     +  + +N W +++T G + E+L  G VD+ T+L+  NA+YFKG W E F    TKD  F L    +  V  M  KK
Sbjct:   14 DLFLTLTEHNPA-----GNIFISPFSISSALAMVFLGARGDTAAQMSKALHFEGVEIHSGFQS-----LNADINKCGAPYTLKLANRLFGEKSYDFLPEFLASTQEMYSAELASVDFLRAPEDARKTINAWVKEQTGGKIPELLASGMVDSLTKLVLVNAIYFKGKWQEKFMVEATKDAPFRLNKKETKTVKMMYQKK 201          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: ALSI_TAMSI (Alpha-1-antitrypsin-like protein CM55-SI OS=Tamias sibiricus PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.268e-18
Identity = 60/198 (30.30%), Postives = 105/198 (53.03%), Query Frame = 3
Query:   48 DVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFAD-----GSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 626
            + ALS  + +A  ++  +N+ FSP SI   L+++S G+KG T  Q+L  L    D  L   A   +   F         P+   +L+  NG++ID++L L + F + V ++Y + +   +F T   E  +++N + EK T G + E+L    +D  T L   N ++FKG W + F+  +T++ DFH+    +++VP M
Sbjct:   51 EFALSFYRVLA-RQSNTTNIFFSPVSIATALAMLSLGTKGDTHTQILEGL----DFNLTEMAEADIHQGFQHLLQTLNRPNTQLQLTSGNGLFIDRNLKLLDKFLEDVKSLYHSEAFSTNF-TNTEEARQQINSYVEKGTKGKIVELLK--ELDRDTVLALVNYIFFKGKWKQPFNEEQTREKDFHVDEATTVRVPMM 240          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: A1AT_MUSSA (Alpha-1-antiproteinase OS=Mus saxicola GN=Serpina1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.268e-18
Identity = 62/210 (29.52%), Postives = 103/210 (49.05%), Query Frame = 3
Query:    9 QSMDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 626
            QS    E  +N  D A SL + + + ++  SN+ FSP SI    +L+S GSKG T  Q+L  L+      S+  ++     L+  +     P    +LS  NG++++  L L   F +   N Y++    V+F  K+ E  + +N + EK T G + + +    +D  T    AN ++F+G W   FD   T + DFH+    +++VP M
Sbjct:   37 QSPASHEMATNLGDFAFSLYREL-VHQSNTSNIFFSPVSIATAFALLSLGSKGDTQTQILEGLQFNLTQTSEADIHKVFQHLLQTL---NRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQSEVFSVNF-AKSEEARKMINDFVEKGTQGKIVDAVK--DLDEDTVFALANYIFFQGKWKTPFDPEHTTEADFHVNESTTVRVPMM 239          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: A1AT2_HORSE (Alpha-1-antiproteinase 2 OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.268e-18
Identity = 63/201 (31.34%), Postives = 109/201 (54.23%), Query Frame = 3
Query:   39 NQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLL---SF-LKSKSDDQLNT-FASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 626
            N  D A SL +HVA  ++  +N+ FSP SI    +L+S G+KG T  Q+L   SF L   ++ Q++  F   L A+  +D       +L+  NG++ID+S  L + F + V  +Y + +  ++F+    E  +++N + EK T G + +++    +D  T L   N ++FKG W + F+   T + DFH+    +++VP M
Sbjct:   56 NLADFAFSLYRHVA-HQSNTTNIFFSPVSIATAFALLSLGAKGDTHTQILEGLSFNLTELAEAQIHDGFQHLLNALNHSDNQL----QLTTGNGLFIDESAKLLDKFLEDVKKLYHSEAFSINFRD-TEEAKKQINDYVEKGTQGKIVDLVK--DLDKDTVLALVNYIFFKGTWEKPFEPEYTTEQDFHVDEKTTVRVPMM 248          
The following BLAST results are available for this feature:
BLAST of FC931699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
ALST_TAMSI1.330e-1830.30Alpha-1-antitrypsin-like protein CM55-ST OS=Tamias... [more]
SPB8_HUMAN1.736e-1832.18Serpin B8 OS=Homo sapiens GN=SERPINB8 PE=1 SV=2[more]
SPB13_MOUSE1.736e-1828.72Serpin B13 OS=Mus musculus GN=Serpinb13 PE=2 SV=1[more]
PAI1_MOUSE1.736e-1828.38Plasminogen activator inhibitor 1 OS=Mus musculus ... [more]
NEUS_CHICK1.736e-1826.58Neuroserpin OS=Gallus gallus GN=SERPINI1 PE=1 SV=1[more]
PAI1_PIG2.268e-1827.75Plasminogen activator inhibitor 1 OS=Sus scrofa GN... [more]
ILEU_BOVIN2.268e-1831.31Leukocyte elastase inhibitor OS=Bos taurus GN=SERP... [more]
ALSI_TAMSI2.268e-1830.30Alpha-1-antitrypsin-like protein CM55-SI OS=Tamias... [more]
A1AT_MUSSA2.268e-1829.52Alpha-1-antiproteinase OS=Mus saxicola GN=Serpina1... [more]
A1AT2_HORSE2.268e-1831.34Alpha-1-antiproteinase 2 OS=Equus caballus PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34108A06EF PostHarvP1 Citrus clementina cDNA clone C34108A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931699 ID=FC931699; Name=FC931699; organism=Citrus clementina; type=EST; length=674bp
GTAGTTTGCAGAGCATGGACGTACGCGAATCAATCAGCAACCAAACCGAC
GTCGCTTTGTCTCTAACAAAGCACGTTGCCCTAACCGAAGCTAAAGACTC
GAACCTCGTCTTCTCGCCGTCATCGATCCACGTTCTGCTGAGCCTGATCT
CGGCTGGATCCAAGGGCCCCACTCTCGACCAGTTGCTCTCTTTTCTCAAG
TCCAAATCCGACGACCAACTTAACACCTTCGCCTCCGAACTCGTCGCCGT
CGTTTTTGCCGACGGAAGTCCTAGCGGCGGGCCCCGCTTGTCCGTGGCCA
ATGGTGTTTGGATTGATAAGTCACTTTCTCTCAAGAATACTTTCAAACAG
GTTGTGGACAACGTCTACAAGGCTGCTTCTAATCAAGTCGATTTCCAAAC
CAAGGCTGCTGAAGTATCCAGAGAAGTGAACATGTGGGCTGAGAAGGAGA
CCAATGGCCTTGTTAAAGAGGTTCTTCCTCCTGGTTCAGTTGACAATTCA
ACCAGGCTCATCTTTGCAAATGCACTATACTTCAAAGGAGCTTGGAATGA
AACATTTGATTCATCAAAGACAAAAGACTATGACTTTCACCTTCTCAATG
GAGGCTCCATTAAAGTGCCGTTCATGACTAGCAAGAAGAATCAGTTTGTG
AGTGCCTTTGATGGTTTCAAGTTT
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