FC931699

Overview
NameFC931699
Unique NameFC931699
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPB10_MOUSE (Serpin B10 OS=Mus musculus GN=Serpinb10 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17
Identity = 55/215 (25.58%), Postives = 94/215 (43.72%), Query Frame = 3
Query:   54 ALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNT-------------------FASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN 641
            AL  +K +A   A+  N+ FSP  I   L+++  G+KG T DQ+   L+  S +   +                     S+   +      P     L  AN ++ +K+    N + + +   + A    V+F   + ++ +E+N W   +T G +  +LP  SVD  T+++  NALYFKG W   F    T +  F +    S  V  M+ K++
Sbjct:   12 ALEFSKKLA-ESAEGRNIFFSPWGISTALAMLYLGTKGTTADQMAQVLQFSSVEDFKSCPDSEKKRKMEFNSGKFEEIQSDFQTLAAEILKPGNSYVLKTANRIYGEKTYPFHNKYLEDMKTYFGAEPQSVNFVEASGQIRKEINSWVGSQTGGKIPNLLPDDSVDTKTKMVLVNALYFKGTWEHQFSVKNTTERPFRVNKTTSKPVQMMSMKQS 225          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: PAI1_RAT (Plasminogen activator inhibitor 1 OS=Rattus norvegicus GN=Serpine1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17
Identity = 64/209 (30.62%), Postives = 106/209 (50.72%), Query Frame = 3
Query:   45 TDVALSLTKHVALTEAKDSNLVFSP---SSIHVLLSLISAGSKGPTLDQLLSFLKSK--SDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSRE---VNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQF 647
            T+  + + +HV +  +KD N+VFSP   SS+  +L L +AG     +   + F  S+  +   L   + EL+      GS +    +S A+ +++ + L L   F      +++    QVDF    +EV R    +N W E+ T G++ ++L  G+V+  TRL+  NALYF G W   F  + T    FH  +G +I VP M ++ N+F
Sbjct:   36 TNFGVKVFQHV-VQASKDRNVVFSPYGVSSVLAMLQLTTAGKTRQQIQDAMGFNISERGTAPALRKLSKELM------GSWNKN-EISTADAIFVQRDLELVQGFMPHFFKLFRTTVKQVDF----SEVERARFIINDWVERHTKGMISDLLAKGAVNELTRLVLVNALYFNGQWKTPFLEASTHQRLFHKSDGSTISVPMM-AQNNKF 231          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: ILEU_PIG (Leukocyte elastase inhibitor OS=Sus scrofa GN=SERPINB1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17
Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 3
Query:   45 TDVALSLTKHVALTEAKDS-NLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 638
            T  AL L +  AL E+  + N+  SP SI   L++I  G++G T  Q+   L   +   +++    L A +   G+      L +AN ++ +K+      F       Y A    VDF   + E  + +N W +++T G + E+L  G VD++T+L+  NA+YFKG+W E F +  TKD  F L    S  V  M  KK
Sbjct:    9 TRFALDLFR--ALNESNPAGNIFISPFSISSALAMILLGTRGNTEAQMSKALHFDTVKDIHSRFQSLNADINKCGASY---ILKLANRLFGEKTYHFLPEFLASTQKTYGAELASVDFLRASEEARKAINEWVKEQTEGKIPELLASGVVDSATKLVLVNAIYFKGSWQEKFMTEATKDAPFRLNKKDSKTVKMMYQKK 202          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPA3L_RAT (Serine protease inhibitor A3L OS=Rattus norvegicus GN=Serpina3l PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17
Identity = 58/205 (28.29%), Postives = 108/205 (52.68%), Query Frame = 3
Query:   36 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSK----SDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 638
            S+ TD ALSL K +AL    D N+VFSP SI   L+++S G+K  T++++L  LK      ++++++     L+  +     P     ++  + ++IDK   + + F++    +Y+A +   DF+ +  E  + +N +   +T G + E+     ++  T ++  N L FKG W   F+ + T + +F+L    S+KVP M  K+
Sbjct:   47 SSNTDFALSLYKKLALRNP-DKNVVFSPLSISAALTILSLGAKDSTMEEILEGLKFNLTEITEEEIHQGFGHLLQRL---SQPEDQVEINTGSALFIDKEQPILSEFQEKTRALYQAEAFIADFK-QPNEAKKLINDYVSNQTQGKIAELF--SDLEERTSMVLVNYLLFKGKWKVPFNPNDTFESEFYLDEKRSVKVPMMKIKE 244          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPA3K_RAT (Serine protease inhibitor A3K OS=Rattus norvegicus GN=Serpina3k PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17
Identity = 58/204 (28.43%), Postives = 105/204 (51.47%), Query Frame = 3
Query:   36 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSK----SDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSK 635
            S  TD  LSL K +AL    D N+VFSP SI   L+++S G+K  T++++L  LK      ++++++     L+  +     P     ++  + ++IDK   + + F++    +Y+A +   DF+ +  E  + +N +   +T G + E+     +D  T ++  N L FKG W   F+ + T + +F+L    S+KVP M  K
Sbjct:   47 SINTDFTLSLYKKLALRNP-DKNVVFSPLSISAALAILSLGAKDSTMEEILEVLKFNLTEITEEEIHQGFGHLLQRL---SQPEDQAEINTGSALFIDKEQPILSEFQEKTRALYQAEAFVADFK-QCNEAKKFINDYVSNQTQGKIAELF--SELDERTSMVLVNYLLFKGKWKVPFNPNDTFESEFYLDEKRSVKVPMMKIK 243          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPA3G_MOUSE (Serine protease inhibitor A3G OS=Mus musculus GN=Serpina3g PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17
Identity = 61/212 (28.77%), Postives = 108/212 (50.94%), Query Frame = 3
Query:    3 SLQSMDVRESISNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 626
            ++ S+D    +S+ TD A SL + + L    D N+VFSP SI   L+L+S G+K  TL ++L  LK       +  ++     L+ ++     P    ++S  + ++I+K L +   FK+    +Y+A +   DFQ +  + ++ +N +    T G +KE++    +  ST ++  N +YFKG W   FD + T   +F+L    S+ V  M
Sbjct:   28 NVTSVDSLTLVSSNTDFAFSLYRKLVLKNP-DENVVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLTETPEPDIHQGFRYLLDLL---SQPGNQVQISTGSALFIEKHLQILAEFKEKARALYQAEAFTADFQ-QPLKATKLINDYVSNHTQGKIKELI--SGLKESTLMVLVNYIYFKGKWKNPFDPNDTFKSEFYLDEKRSVIVSMM 232          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPI2_MOUSE (Serpin I2 OS=Mus musculus GN=Serpini2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.508e-17
Identity = 53/193 (27.46%), Postives = 97/193 (50.26%), Query Frame = 3
Query:   48 DVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 626
            D A+ L K ++L+    +N++FSP    +LL ++  G+KG    Q+L  L+ +       F S L ++  A          ++A+ +++ +   +K T+       +++A+  VDF   A   ++ ++ W E +T+G +K +         TRL+  NA+YFKG W + F    T+  DF   +G ++KVP M
Sbjct:   28 DFAVDLYKAISLSHK--NNIIFSPLGTTMLLGMVQLGAKGKAQQQILKTLRMRGTPAGEEF-SVLKSLFSAISKKKQEFTFNLASALYLQEGFIVKETYLHSNKEFFQSATKLVDF-LDAKTSAQAISTWVESKTDGKIKNMFSEEEFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMTDFTKKDGSTVKVPMM 216          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPB10_CHICK (Heterochromatin-associated protein MENT OS=Gallus gallus GN=SERPINB10 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.508e-17
Identity = 57/203 (28.08%), Postives = 86/203 (42.36%), Query Frame = 3
Query:   93 KDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK-------------------------SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM 626
            +D N+ FSP SI   L+L    +KG T  ++   L                              +Q     S    ++ A   P     L  AN ++++K+ +L  T+ Q+    YKA   +V+F+T   +  +E+N W EK+T   +K +L    V  +TRLI  NA+YFK  W   F + KT    F L    S  V  M
Sbjct:   24 RDKNIFFSPWSISSALALTYLAAKGSTAREMAEVLHFTEAVRAESSSVARPSRGRPKRRRMDPEHEQAENIHSGFKELLTAFNKPRNNYSLRSANRIYVEKTYALLPTYLQLSKKYYKAEPQKVNFKTAPEQSRKEINTWVEKQTESKIKNLLSSDDVKATTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMM 226          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPB10_BOVIN (Serpin B10 OS=Bos taurus GN=SERPINB10 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.275e-17
Identity = 60/215 (27.91%), Postives = 98/215 (45.58%), Query Frame = 3
Query:   54 ALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLKSKSDDQLNTFA--------------------SELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKK 638
            AL  +K +A   A+  N+ FSP  I   L+++  G+KG T  Q+   L+  S DQ + F                     S+   ++    S S    L  AN ++ +K+      + + V   + A    V+F   + ++ +E+N W EK+T G +  +LP  +VD +TR++  NALYFKG W   F    T +  F +    S  V  M+ K+
Sbjct:   12 ALEFSKKLA-ESAEGKNIFFSPWGISASLAMVYLGTKGTTAAQMAQVLQF-SRDQDSKFCPDSEKKRKMEFNVGKPEEIYSDFQTLISEINSSSHACILKTANRIYGEKTFPFHKKYLEDVKTYFGAEPQSVNFIGASDQIRKEINSWVEKQTEGKILNLLPDDAVDPTTRMVLVNALYFKGVWEHQFLVQNTTEKSFKINKTTSKPVQMMSMKE 224          
BLAST of FC931699 vs. ExPASy Swiss-Prot
Match: SPA3N_MOUSE (Serine protease inhibitor A3N OS=Mus musculus GN=Serpina3n PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.275e-17
Identity = 58/202 (28.71%), Postives = 102/202 (50.50%), Query Frame = 3
Query:   36 SNQTDVALSLTKHVALTEAKDSNLVFSPSSIHVLLSLISAGSKGPTLDQLLSFLK----SKSDDQLNTFASELVAVVFADGSPSGGPRLSVANGVWIDKSLSLKNTFKQVVDNVYKAASNQVDFQTKAAEVSREVNMWAEKETNGLVKEVLPPGSVDNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMT 629
            S  TD A SL K + L    D N+VFSP SI   L+++S G+KG TL+++L  LK      S+  ++     L+  +     P    ++S  + ++I+K   +   F++    +Y+A +   DFQ +  +  + +N +  K+T G++KE++    +D  T ++  N +YFK  W   FD   T   +F+      + VP M+
Sbjct:   49 SINTDFAFSLYKELVLKNP-DKNIVFSPLSISAALAVMSLGAKGNTLEEILEGLKFNLTETSEADIHQGFGHLLQRL---NQPKDQVQISTGSALFIEKRQQILTEFQEKAKTLYQAEAFTADFQ-QPRQAKKLINDYVRKQTQGMIKELV--SDLDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRRPVIVPMMS 243          
The following BLAST results are available for this feature:
BLAST of FC931699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
SPB10_MOUSE1.470e-1725.58Serpin B10 OS=Mus musculus GN=Serpinb10 PE=2 SV=1[more]
PAI1_RAT1.470e-1730.62Plasminogen activator inhibitor 1 OS=Rattus norveg... [more]
ILEU_PIG1.470e-1731.66Leukocyte elastase inhibitor OS=Sus scrofa GN=SERP... [more]
SPA3L_RAT1.920e-1728.29Serine protease inhibitor A3L OS=Rattus norvegicus... [more]
SPA3K_RAT1.920e-1728.43Serine protease inhibitor A3K OS=Rattus norvegicus... [more]
SPA3G_MOUSE1.920e-1728.77Serine protease inhibitor A3G OS=Mus musculus GN=S... [more]
SPI2_MOUSE2.508e-1727.46Serpin I2 OS=Mus musculus GN=Serpini2 PE=1 SV=1[more]
SPB10_CHICK2.508e-1728.08Heterochromatin-associated protein MENT OS=Gallus ... [more]
SPB10_BOVIN3.275e-1727.91Serpin B10 OS=Bos taurus GN=SERPINB10 PE=2 SV=1[more]
SPA3N_MOUSE3.275e-1728.71Serine protease inhibitor A3N OS=Mus musculus GN=S... [more]

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Properties
Property NameValue
Genbank descriptionC34108A06EF PostHarvP1 Citrus clementina cDNA clone C34108A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931699 ID=FC931699; Name=FC931699; organism=Citrus clementina; type=EST; length=674bp
GTAGTTTGCAGAGCATGGACGTACGCGAATCAATCAGCAACCAAACCGAC
GTCGCTTTGTCTCTAACAAAGCACGTTGCCCTAACCGAAGCTAAAGACTC
GAACCTCGTCTTCTCGCCGTCATCGATCCACGTTCTGCTGAGCCTGATCT
CGGCTGGATCCAAGGGCCCCACTCTCGACCAGTTGCTCTCTTTTCTCAAG
TCCAAATCCGACGACCAACTTAACACCTTCGCCTCCGAACTCGTCGCCGT
CGTTTTTGCCGACGGAAGTCCTAGCGGCGGGCCCCGCTTGTCCGTGGCCA
ATGGTGTTTGGATTGATAAGTCACTTTCTCTCAAGAATACTTTCAAACAG
GTTGTGGACAACGTCTACAAGGCTGCTTCTAATCAAGTCGATTTCCAAAC
CAAGGCTGCTGAAGTATCCAGAGAAGTGAACATGTGGGCTGAGAAGGAGA
CCAATGGCCTTGTTAAAGAGGTTCTTCCTCCTGGTTCAGTTGACAATTCA
ACCAGGCTCATCTTTGCAAATGCACTATACTTCAAAGGAGCTTGGAATGA
AACATTTGATTCATCAAAGACAAAAGACTATGACTTTCACCTTCTCAATG
GAGGCTCCATTAAAGTGCCGTTCATGACTAGCAAGAAGAATCAGTTTGTG
AGTGCCTTTGATGGTTTCAAGTTT
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