FC931707

Overview
NameFC931707
Unique NameFC931707
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15377 contig Ccv1_Contig15377:1..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.135e-14
Identity = 37/62 (59.68%), Postives = 42/62 (67.74%), Query Frame = 2
Query:  149 KEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPL 334
            KEV +RGVR+RPWGRYAAEIRDP KK RVWLG+F+T                G+KA TNFPL
Sbjct:   49 KEVRYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPL 110          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 2
Query:   38 NNKHYPLEIKIYYGNNMAPREKASGPAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSENVTN 355
            NN+H P+       N  AP  +            G++++ H+RGVR+RPWG++AAEIRDP K +RVWLGTF+T                G+KAK NFP  ++  +N
Sbjct:   61 NNQHQPVVYNQQDPNPPAPPTQ----------DQGLLRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASN 156          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.330e-12
Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 2
Query:  158 HFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP--LPSENVTNKISH 367
            H+RGVR+RPWG++AAEIRDP K +RVWLGTF+T                G KAK NFP  +     T  ISH
Sbjct:   38 HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISH 109          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ESR2_ARATH (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.737e-12
Identity = 40/82 (48.78%), Postives = 47/82 (57.32%), Query Frame = 2
Query:  101 KASGPAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNF--PLPS 340
            KA+  A  +G     V  + +RGVR+RPWGRYAAEIRDP  K R WLGTFDT                G KA+TNF  P+PS
Sbjct:   43 KAASGAGASG-----VSTIRYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPMPS 119          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 2
Query:  140 GIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 331
            G ++  H+RGVR+RPWG++AAEIRDP K +RVWLGTF+T                G+KAK NFP
Sbjct:   83 GDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP 146          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana GN=CRF5 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 2
Query:   26 SLAQNNKHYPLEIKIYYGNNM---APREKASGPAKVNGNSNGIVKEV-HFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSENVTNKI 361
            S+A   K Y  EI+    ++    A + K   PA    N   +VK V  +RGVR+RPWG++AAEIRDP  ++R+WLGTF T                G  A+TNF  P  + T ++
Sbjct:   50 SVAPRVKRYVDEIRFCDEDDEPKPARKAKKKSPAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEV 165          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.963e-12
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 2
Query:  161 FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPS 340
            +RGVR+RPWGRYAAEIRDP  K R WLGTFDT                GAKA+TNF  P+
Sbjct:   57 YRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPT 116          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12
Identity = 35/60 (58.33%), Postives = 39/60 (65.00%), Query Frame = 2
Query:  158 HFRGVRKRPWGRYAAEIRDPGKKS-RVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPL 334
            H+RGVR+RPWG+YAAEIRDP KK  RVWLGTFDT                G+KA  NFPL
Sbjct:   71 HYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPL 130          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 37/86 (43.02%), Postives = 47/86 (54.65%), Query Frame = 2
Query:   83 NMAPREKASGPAKVNGNS--NGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPL 334
            N+ P  K+ G  K    S  + + +   FRGVR+RPWGR+AAEIRDP +  RVWLGT+DT                G  A TNFP+
Sbjct:   70 NLMPSTKSIGDRKRRSVSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPV 155          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 2
Query:  158 HFRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSENVTNKISH 367
            H+RGVR+RPWG++AAEIRDP +K +RVWLGTFDT                G+KA  NFPL   N   + ++
Sbjct:  137 HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVANFKQEFNN 207          
The following BLAST results are available for this feature:
BLAST of FC931707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
ERF77_ARATH4.135e-1459.68Ethylene-responsive transcription factor 10 OS=Ara... [more]
EF115_ARATH5.400e-1438.68Ethylene-responsive transcription factor ERF115 OS... [more]
EF113_ARATH1.330e-1250.00Ethylene-responsive transcription factor ERF113 OS... [more]
ESR2_ARATH1.737e-1248.78Ethylene-responsive transcription factor ESR2 OS=A... [more]
EF114_ARATH2.269e-1251.56Ethylene-responsive transcription factor ERF114 OS... [more]
CRF5_ARATH2.269e-1237.07Ethylene-responsive transcription factor CRF5 OS=A... [more]
ESR1_ARATH2.963e-1256.67Ethylene-responsive transcription factor ESR1 OS=A... [more]
EF105_ARATH3.870e-1258.33Ethylene-responsive transcription factor ERF105 OS... [more]
PTI6_SOLLC8.622e-1243.02Pathogenesis-related genes transcriptional activat... [more]
ERF5_NICSY8.622e-1247.89Ethylene-responsive transcription factor 5 OS=Nico... [more]

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Properties
Property NameValue
Genbank descriptionC34108B02EF PostHarvP1 Citrus clementina cDNA clone C34108B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931707 ID=FC931707; Name=FC931707; organism=Citrus clementina; type=EST; length=751bp
GGTCCCCACTTCCTTTTATGTTTTGTCACTCGCTCAAAACAACAAACACT
ACCCACTTGAAATAAAAATATATTACGGAAATAATATGGCGCCGAGAGAG
AAGGCGTCGGGACCTGCAAAAGTTAACGGAAACAGTAACGGTATTGTTAA
AGAGGTGCATTTTAGGGGCGTTAGAAAGAGGCCGTGGGGTCGATATGCAG
CCGAGATTAGGGATCCCGGCAAGAAGAGCCGTGTTTGGCTTGGAACCTTC
GACACCGCTGAAGAAGCCGCTCGGGCCTACGACGCTGCCGCTAGAGAATT
TCGCGGCGCCAAGGCTAAAACTAACTTCCCCTTGCCTTCTGAAAATGTAA
CCAACAAAATTAGTCACAACAATATCAACATCAACAATAATAACCAGAGC
CCCAGCCAAAGTAGTACCATAGAGTCTTCAAGCCGCGAGCCGGCTCTGAT
GATCGATTCGTCGCCGTTAGATCTCAATCTTGGTCCGGCTTGCGCCGGCG
GTGGTGCCGGTGGAGGATTTAACGCCACCGTTCGGTTTCCCTTCCAGCCT
GTGGGGGGTGCTTTCGGTGCGGCGAACCAGGTGTTTTATTTTGATCCGGT
AGCTGCGATGAAGAGTCAGCAGTATCAACGGCTCAGATTCGACCATCACC
GGAATTATAATTTTCATGCGGCGGCGGTGACGGCGGTCGGTGACGGAAGT
GTGCAGAGCGACTCTGAATCATCATCCATTGTCGATTTGAACCATCACGA
T
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