FC931707

Overview
NameFC931707
Unique NameFC931707
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15377 contig Ccv1_Contig15377:1..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 2
Query:   98 EKASGPAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 331
            +KA G  K+    N   K+  +RGVR+RPWG++AAEIRDP + +RVWLGTF+T                G +AK NFP
Sbjct:  118 KKAEGGGKIRKRKN---KKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 2
Query:  149 KEVHFRGVRKRPWGRYAAEIRDPGKKS-RVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPL 334
            +E H+RGVR+RPWG+YAAEIRDP KK  R+WLGT+DT                G KA  NFPL
Sbjct:   84 EERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPL 146          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.126e-11
Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = 2
Query:  158 HFRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSEN 346
            H+RGVR+RPWG++AAEIRDP +K +RVWLGTFDT                G+KA  NFPL   N
Sbjct:  144 HYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVAN 207          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.126e-11
Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 2
Query:  149 KEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 331
            ++ ++RGVR+RPWG++AAEIRDP K +RVWLGTFDT                G KAK NFP
Sbjct:   66 RQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.126e-11
Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 2
Query:  158 HFRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPL 334
            H+RGVR+RPWG++AAEIRDP K+ SRVWLGTFDT                G+KA  NFPL
Sbjct:  155 HYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPL 214          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 2
Query:   92 PREKASGPAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSENV 349
            P    S   K   +S  + +   +RGVR+RPWG++AAEIRDP K +RVWLGTF+T                G+KAK NFP   ENV
Sbjct:   38 PLITGSAVTKECESSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP---ENV 120          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 2
Query:   89 APREKASGPA-KVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 331
            +P E+   PA K +G+     K + +RGVR+RPWG++AAEIRDP K  +RVWLGT++T                G+KAK NFP
Sbjct:   67 SPAEENKPPATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 32/78 (41.03%), Postives = 41/78 (52.56%), Query Frame = 2
Query:   98 EKASGPAKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 331
            EK    +K      G+ K+ +FRGVR R WG++ +EIR+P KKSR+WLGTF T                G  A  NFP
Sbjct:   19 EKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFP 96          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 34/65 (52.31%), Postives = 41/65 (63.08%), Query Frame = 2
Query:  161 FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLP--SENV 349
            FRGVR+RPWG++AAEIRDP ++ RVWLGTFDT                G  A+ NFP P  +ENV
Sbjct:   87 FRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVTENV 151          
BLAST of FC931707 vs. ExPASy Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 36/72 (50.00%), Postives = 42/72 (58.33%), Query Frame = 2
Query:  161 FRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPL----PSENVTNKIS 364
            F GVR+RPWGRYAAEIRDP  K R WLGTFDT                G +A+TNF      PS +VT+ +S
Sbjct:   20 FLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNFVYSDMPPSSSVTSIVS 91          
The following BLAST results are available for this feature:
BLAST of FC931707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
EF109_ARATH8.622e-1244.87Ethylene-responsive transcription factor ERF109 OS... [more]
EF104_ARATH8.622e-1253.97Ethylene-responsive transcription factor ERF104 OS... [more]
ERF5_TOBAC1.126e-1153.13Ethylene-responsive transcription factor 5 OS=Nico... [more]
EF112_ARATH1.126e-1152.46Ethylene-responsive transcription factor ERF112 OS... [more]
EF102_ARATH1.126e-1156.67Ethylene-responsive transcription factor 5 OS=Arab... [more]
RAP26_ARATH1.921e-1144.19Ethylene-responsive transcription factor RAP2-6 OS... [more]
ERF99_ARATH1.921e-1144.58Ethylene-responsive transcription factor 13 OS=Ara... [more]
ERF39_ARATH2.509e-1141.03Ethylene-responsive transcription factor ERF039 OS... [more]
CRF1_ARATH2.509e-1152.31Ethylene-responsive transcription factor CRF1 OS=A... [more]
LEP_ARATH3.276e-1150.00Ethylene-responsive transcription factor LEP OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC34108B02EF PostHarvP1 Citrus clementina cDNA clone C34108B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931707 ID=FC931707; Name=FC931707; organism=Citrus clementina; type=EST; length=751bp
GGTCCCCACTTCCTTTTATGTTTTGTCACTCGCTCAAAACAACAAACACT
ACCCACTTGAAATAAAAATATATTACGGAAATAATATGGCGCCGAGAGAG
AAGGCGTCGGGACCTGCAAAAGTTAACGGAAACAGTAACGGTATTGTTAA
AGAGGTGCATTTTAGGGGCGTTAGAAAGAGGCCGTGGGGTCGATATGCAG
CCGAGATTAGGGATCCCGGCAAGAAGAGCCGTGTTTGGCTTGGAACCTTC
GACACCGCTGAAGAAGCCGCTCGGGCCTACGACGCTGCCGCTAGAGAATT
TCGCGGCGCCAAGGCTAAAACTAACTTCCCCTTGCCTTCTGAAAATGTAA
CCAACAAAATTAGTCACAACAATATCAACATCAACAATAATAACCAGAGC
CCCAGCCAAAGTAGTACCATAGAGTCTTCAAGCCGCGAGCCGGCTCTGAT
GATCGATTCGTCGCCGTTAGATCTCAATCTTGGTCCGGCTTGCGCCGGCG
GTGGTGCCGGTGGAGGATTTAACGCCACCGTTCGGTTTCCCTTCCAGCCT
GTGGGGGGTGCTTTCGGTGCGGCGAACCAGGTGTTTTATTTTGATCCGGT
AGCTGCGATGAAGAGTCAGCAGTATCAACGGCTCAGATTCGACCATCACC
GGAATTATAATTTTCATGCGGCGGCGGTGACGGCGGTCGGTGACGGAAGT
GTGCAGAGCGACTCTGAATCATCATCCATTGTCGATTTGAACCATCACGA
T
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