FC931715

Overview
NameFC931715
Unique NameFC931715
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length720
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931715_ssr26 microsatellite FC931715_ssr26:26..37. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15380 contig Ccv1_Contig15380:1..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: DCLK3_MOUSE (Serine/threonine-protein kinase DCLK3 OS=Mus musculus GN=Dclk3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19
Identity = 57/170 (33.53%), Postives = 97/170 (57.06%), Query Frame = 2
Query:  215 VLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNN---NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPEDLT 715
            V+G GN  TV + +HR T + YA+K++           V  E+ I++    P IV+   ++E  + +I ++MEY+  G L   + +N  F EP+ A + + + K L ++H   I+HRD+KP NLLV  N   ++ +K+ADFG++K + R +    +  GT  Y++PE L+
Sbjct:  348 VIGDGNFATVKECRHRETKQAYAMKMIDKSQLKGKEDIVDSEILIIQSLSHPNIVKLHEVYETEA-EIYLIMEYVQGGDLFDAIVENVKFPEPEAAVMITDLCKALVHMHDKNIVHRDVKPENLLVQRNEDKSITLKLADFGLAKYVVRPI---FTVCGTPTYVAPEILS 513          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: CDC15_YEAST (Cell division control protein 15 OS=Saccharomyces cerevisiae GN=CDC15 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19
Identity = 63/168 (37.50%), Postives = 100/168 (59.52%), Query Frame = 2
Query:  212 QVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPEDL 712
            QV+G G+ G VYK  ++ T ++ A+K V  + D  +   +  E+ +L+  +   IV+  G   K S ++ IL+EY  +G+L  L++++ T  SE +     +Q L GL YLHG  +IHRDIK +N+L++ +N  VK+ADFGVS I+  S     +  GT  +M+PE L
Sbjct:   29 QVIGRGSYGVVYKAINKHTDQVVAIKEVVYENDEELN-DIMAEISLLKNLNHNNIVKYHGFIRK-SYELYILLEYCANGSLRRLISRSSTGLSENESKTYVTQTLLGLKYLHGEGVIHRDIKAANILLSADN-TVKLADFGVSTIVNSS---ALTLAGTLNWMAPEIL 190          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: STK36_HUMAN (Serine/threonine-protein kinase 36 OS=Homo sapiens GN=STK36 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 57/168 (33.93%), Postives = 95/168 (56.55%), Query Frame = 2
Query:  209 LQVLGHGNGGTVYKVQHRCTLKIYALKVVH--GDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 706
            L+++G G+ G VYK + + + ++ ALK +   G ++  +R  + RE+EI+R    P IV     FE    ++ ++ +Y + G L  +L  +G   E +   IA+Q++  L YLH H+I+HRD+KP N+L+      +K+ DFG ++ M  +     S  GT  YMSPE
Sbjct:    7 LEMIGEGSFGRVYKGRRKYSAQVVALKFIPKLGRSEKELRN-LQREIEIMRGLRHPNIVHMLDSFETDK-EVVVVTDYAE-GELFQILEDDGKLPEDQVQAIAAQLVSALYYLHSHRILHRDMKPQNILLAKGG-GIKLCDFGFARAMSTNTMVLTSIKGTPLYMSPE 170          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: SID1_SCHPO (Serine/threonine-protein kinase sid1 OS=Schizosaccharomyces pombe GN=sid1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 57/166 (34.34%), Postives = 97/166 (58.43%), Query Frame = 2
Query:  209 LQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 706
            L+ LG G+ G V+K +   +  I A+K +  +        + +E+ +L   +S  ++Q +G F      + ILME+MD G++  LL K G  +E   + I  ++L GL+YLHG   IHRDIK +N+L++++   VK+ADFGV+  +  +    +++VGT  +M+PE
Sbjct:   12 LRKLGSGSFGVVWKARENVSGDIIAIKQIDLETGIDDITDIEQEVFMLSNCNSSNVIQYYGCFVD-GYTLWILMEHMDGGSVSGLL-KMGRLNEQVISIILREVLYGLNYLHGQNKIHRDIKAANILLSSSTGNVKLADFGVAAQLSNAASRRHTFVGTPFWMAPE 175          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: M4K4_HUMAN (Mitogen-activated protein kinase kinase kinase kinase 4 OS=Homo sapiens GN=MAP4K4 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 60/176 (34.09%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  203 EKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRR-TDSPFIVQCFGIFEKPS-----GDIAILMEYMDSGTLDTLLN--KNGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 706
            E ++V+G+G  G VYK +H  T ++ A+KV+  D       ++  E+ +L++ +    I   +G F K S       + ++ME+  +G++  L+   K  T  E   A+I+ +IL+GL++LH H +IHRDIK  N+L+   N +VK+ DFGVS  + R++   N+++GT  +M+PE
Sbjct:   26 ELVEVVGNGTYGQVYKGRHVKTGQLAAIKVM--DVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLL-TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE 198          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: DST2_DICDI (Serine/threonine-protein kinase dst2 OS=Dictyostelium discoideum GN=dst2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 60/169 (35.50%), Postives = 100/169 (59.17%), Query Frame = 2
Query:  203 EKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 706
            E ++ +  G+ GTVYK +H  T  I A+K++  D D T    V  E++IL R +   IV+ +G + K   ++ I ME    G++  +  + N   +E + A++  + LKGL YLH   +IHRD+K +N+L+  +   VK+ADFGVS ++ +S    N+++GT  +M+PE
Sbjct:   21 ELIEEIAEGSFGTVYKGKHLPTGNIMAVKIIALDEDETFEDLVV-EIDILNRCNHNNIVKYYGSWVK-GDELFIAMECCGGGSITEIYQELNIPLNESQIAYVCRETLKGLEYLHHTNVIHRDLKGANILLTESG-DVKLADFGVSGLLDKS-SKRNTFIGTPYWMAPE 185          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: AKT1_CAEEL (Serine/threonine-protein kinase akt-1 OS=Caenorhabditis elegans GN=akt-1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 60/179 (33.52%), Postives = 98/179 (54.75%), Query Frame = 2
Query:  185 IAYSDLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVRRQV---FREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPEDL 712
            I   D + L+VLG G  G V   + + T K+YA+K++  D     R +V     E  +L+R   PF+ +    F++    +  +M++ + G L T + K GTFSEP+     ++I+  L YLH   I++RD+K  NLL++ +   +KIADFG+ K      D  +++ GT  Y++PE L
Sbjct:  188 ITMEDFDFLKVLGKGTFGKVILCKEKRTQKLYAIKILKKDVI-IAREEVAHTLTENRVLQRCKHPFLTELKYSFQEQHY-LCFVMQFANGGELFTHVRKCGTFSEPRARFYGAEIVLALGYLHRCDIVYRDMKLENLLLDKDG-HIKIADFGLCKEEISFGDKTSTFCGTPEYLAPEVL 363          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: STK36_PONAB (Serine/threonine-protein kinase 36 OS=Pongo abelii GN=STK36 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 57/168 (33.93%), Postives = 95/168 (56.55%), Query Frame = 2
Query:  209 LQVLGHGNGGTVYKVQHRCTLKIYALKVVH--GDADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 706
            L+++G G+ G VYK + + + ++ ALK +   G ++  +R  + RE+EI+R    P IV     FE    ++ ++ +Y + G L  +L  +G   E +   IA+Q++  L YLH H+I+HRD+KP N+L+      +K+ DFG ++ M  +     S  GT  YMSPE
Sbjct:    7 LEMIGEGSFGRVYKGRRKYSAQVVALKFIPKLGRSEKELRN-LQREIEIMRGLRHPNIVHMLDSFETDK-EVVVVTDYAE-GELLQILEDDGKLPEDQVQAIAAQLVSALYYLHSHRILHRDMKPQNILLAKGG-GIKLCDFGFARAMSTNTMVLTSIKGTPLYMSPE 170          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: KAPCG_MACMU (cAMP-dependent protein kinase catalytic subunit gamma (Fragment) OS=Macaca mulatta GN=PRKACG PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 2
Query:  203 EKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHGDADPTVR----RQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPE 706
            E+L+ LG G+ G V  V+HR T   YA+K++  D    VR         E  IL+  + PF+V+    F K + ++ ++MEY+  G + + L + G FSEP+    A+Q++    YLH   +IHRD+KP NLL++     +++ DFG +K +  R+   C    GT  Y++PE
Sbjct:   44 ERLKTLGTGSYGRVMLVRHRETGNHYAMKIL--DKQKVVRLKQVEHTLNEKRILQAINFPFLVKLQFSF-KDNSNLYLVMEYVPGGEMFSHLRRVGRFSEPQACFYAAQVVLAFQYLHSLDLIHRDLKPENLLIDQQG-YLQVTDFGFAKRVKGRTWTLC----GTPEYLAPE 208          
BLAST of FC931715 vs. ExPASy Swiss-Prot
Match: CDS1_SCHPO (Serine/threonine-protein kinase cds1 OS=Schizosaccharomyces pombe GN=cds1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 57/179 (31.84%), Postives = 95/179 (53.07%), Query Frame = 2
Query:  194 SDLEKLQVLGHGNGGTVYKVQHRCTLKIYALKVVHG------DADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKPAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPEDL 712
            S  E ++ LG G    V       + K YA+K+++        ++        RE++IL+    P +VQC  IFE    ++ I+MEY++ G L   L  NG+  E     +  Q+L+ L +LH   + HRDIKP N+L+  N+  +KI+DFG++K++  +     ++ GT  Y++PE L
Sbjct:  165 SHYEIIRTLGSGTFAVVKLAVEVNSGKWYAIKIINKRKILLTSSEKRATEMFQREIDILKSLHHPGVVQCHEIFENDD-ELFIVMEYVEGGDLMDFLIANGSIDEQDCKPLLKQLLETLLHLHKQGVTHRDIKPENILI-TNDFHLKISDFGLAKVIHGTGTFLETFCGTMGYLAPEVL 341          
The following BLAST results are available for this feature:
BLAST of FC931715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DCLK3_MOUSE5.125e-1933.53Serine/threonine-protein kinase DCLK3 OS=Mus muscu... [more]
CDC15_YEAST5.125e-1937.50Cell division control protein 15 OS=Saccharomyces ... [more]
STK36_HUMAN8.741e-1933.93Serine/threonine-protein kinase 36 OS=Homo sapiens... [more]
SID1_SCHPO8.741e-1934.34Serine/threonine-protein kinase sid1 OS=Schizosacc... [more]
M4K4_HUMAN8.741e-1934.09Mitogen-activated protein kinase kinase kinase kin... [more]
DST2_DICDI8.741e-1935.50Serine/threonine-protein kinase dst2 OS=Dictyostel... [more]
AKT1_CAEEL8.741e-1933.52Serine/threonine-protein kinase akt-1 OS=Caenorhab... [more]
STK36_PONAB1.142e-1833.93Serine/threonine-protein kinase 36 OS=Pongo abelii... [more]
KAPCG_MACMU1.142e-1834.68cAMP-dependent protein kinase catalytic subunit ga... [more]
CDS1_SCHPO1.142e-1831.84Serine/threonine-protein kinase cds1 OS=Schizosacc... [more]

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Properties
Property NameValue
Genbank descriptionC34108B10EF PostHarvP1 Citrus clementina cDNA clone C34108B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931715 ID=FC931715; Name=FC931715; organism=Citrus clementina; type=EST; length=720bp
GATTTCTTCAAATCAAAACAAAAAGATAATAATAATAACAATAATGGCCG
TCGTAAAGCAACGTCGCCAACTCAATCTTCGTCTCCCTATGCCTGAACTT
TCGGAGCGGTGCCTGCGTTTTCCTTTGGCCCTCCCTCCCACTGCCCCCAA
CACTAATAACAACACCACCGCCACCACCGCCGCCATCGCCTACTCTGATC
TTGAGAAACTTCAAGTCCTTGGCCACGGAAACGGTGGAACAGTCTACAAA
GTCCAACACAGATGCACCCTCAAAATCTACGCCCTCAAAGTTGTCCATGG
CGACGCTGACCCCACCGTGCGCCGCCAAGTCTTCCGTGAAATGGAAATCC
TCCGCCGCACTGACTCTCCTTTCATTGTTCAGTGCTTTGGTATATTCGAA
AAGCCTTCTGGTGACATCGCTATTTTGATGGAGTACATGGATTCAGGCAC
CCTCGATACTTTGTTGAACAAAAACGGCACCTTTTCGGAGCCTAAGCCTG
CTCACATAGCCTCTCAAATTCTCAAAGGTTTGAGTTATTTGCATGGCCAT
AAAATCATTCATCGAGATATTAAGCCATCCAATTTACTGGTTAATAACAA
CAACATGCAAGTGAAAATAGCCGATTTTGGTGTTAGTAAAATCATGTGCC
GTTCTTTGGATGCTTGTAATTCTTATGTGGGTACTTGTGCTTATATGAGT
CCTGAAGATTTGACCCGATG
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