FC931723

Overview
NameFC931723
Unique NameFC931723
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  213 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSTGYSKGDG-LGA---EIVGTFVLVYTVFSATDVKRN 692
            P E +     +A +AEF++T +F+     + M  +K     +T   G+   A A    +F  V   A ISGGH+NPAVTFG F+   ++L R + Y I Q LG++    ++K           GG  + + G S G G L A   EIV TF LVYTV++     +N
Sbjct:   11 PDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK--------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKN 168          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.148e-14
Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 3
Query:  219 ELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGG-GANMLSTGYSKGDGLGAEIVGTFVLVYTVFSATDVKR 689
            EL S +F RA +AEF+AT LF++  + + +   ++        +  IA AFG  I  LV     +SG HINPAVT    +   +S  RAVFY+  Q LGA+ GAA++   + +   + G    N L+   + G  +  E+  T  LV  +F +TD +R
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRR 153          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  216 GELSSWSFYRAGIAEFVATFLFLYITVLTVM--GVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSTGYSKGDGLGAEIVGTFVLVYTVF-SATDVKRNA 695
            G+  S +  +A +AEF+AT LF++  V + +  G   +       G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   VFY + Q LGA   A ++ GF      +          G S+ +G+  E+V TF LVYTV+ +A D K+ +
Sbjct:   10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGKAI----PTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS 167          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14
Identity = 51/150 (34.00%), Postives = 76/150 (50.67%), Query Frame = 3
Query:  240 YRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSTGYSKGDGLGAEIVGTFVLVYTVFSATDVKR 689
            +R  +AE + TF  + I V +  G S+         I  IA+ FG  +  L      ISG HINPAVT G  +  ++S+ ++V Y+ +QC+GAI GAAV+K         L  G +  S+  + G  +  E + TF+LV  V   +D  R
Sbjct:   23 WRQLMAELIGTFFLVVIGVGSCTGGSEWSPS-----IPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR 167          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 51/163 (31.29%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  243 RAGIAEFVATFLFLYITVLTVMGVSK-------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK----GFQKSQYEMLGGGANMLSTGYSKGDGLGAEIVGTFVLVYTVFS-ATDVKRNA 695
            RA +AEF++TF+F++    +++ + K            +  G+  +A A    +FA V     +SGGH+NPAVTF   +  ++S+ RA++Y + Q +GAI    +++    G +   +         +++G S+  GL  EI+ TF LVY V+S A D KR +
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH--------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS 178          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 3
Query:  243 RAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSTGYSKGDGLGAEIVGTFVLVYTVF-SATDVKRNA 695
            +A +AEF+AT LF++  V + +  S+          G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   + Y + Q LGA     +++     Q     G      +G S+ +G+  EIV TF LVYTV+ +A D K+ +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG-----VSGISEIEGVVMEIVITFALVYTVYATAADPKKGS 167          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = 3
Query:  243 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSTGYSKGDGLG------AEIVGTFVLVYTVFSAT-DVKR 689
            RA I+EF+AT +F++    +V+ + K     ST G +  +A A    +   V     ISGGH+NPAVTFG  +  ++SL RAV Y + Q LGA+    +++        +  GG  M   G++   G+G       E V TF L+Y  ++   D KR
Sbjct:   26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLR--------LATGG--MRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR 172          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 51/159 (32.08%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  243 RAGIAEFVATFLFLYITVLTVMGVSK-------SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSTGYSKGDGLGAEIVGTFVLVYTVFSA-TDVKRNA 695
            RA +AEF++TF+F++    +++ + K            +  G+  +A A    +FA V     +SGGH+NPAVTFG  +  +++  RA++Y I Q LGAI    +++        +       L++G    +GL  EI+ TF LVY V+S   D KR +
Sbjct:   24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPV----GFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS 178          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  216 GELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSTGYSKGDGLGAEIVGTFVLVYTVF-SATDVKRNA 695
            G+  S    +A +AEF+AT LF++  V + +  +K  + +     G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY I Q LG+     ++K         L    + ++ G +   G+  EI+ TF LVYTV+ +A D K+ +
Sbjct:   10 GDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNG----LAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS 168          
BLAST of FC931723 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 55/154 (35.71%), Postives = 80/154 (51.95%), Query Frame = 3
Query:  243 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSTGYSKGDGLGAEIVGTFVLVYTVF-SATDVKRNA 695
            RA +AEF++T +F++    + +  +K     +T   G+   A A    +F  V   A ISGGH+NPAVTFG+ L   ++L R + Y I Q LG++  A  +  F      +   G   LS G    + L  EIV TF LVYTV+ +A D K  +
Sbjct:   22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSV-AACFLLSFATGGEPIPAFG---LSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS 171          
The following BLAST results are available for this feature:
BLAST of FC931723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
TIP11_ARATH2.148e-1434.34Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
AQP2_SHEEP2.148e-1434.81Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
TIP21_MAIZE3.664e-1434.97Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
AQP_HAEIX4.785e-1434.00Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
TIP32_ARATH6.249e-1431.29Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP23_MAIZE6.249e-1434.42Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP31_MAIZE8.162e-1433.76Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP31_ARATH8.162e-1432.08Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP2_TOBAC8.162e-1431.90Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP12_ARATH8.162e-1435.71Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionC34108C06EF PostHarvP1 Citrus clementina cDNA clone C34108C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931723 ID=FC931723; Name=FC931723; organism=Citrus clementina; type=EST; length=703bp
GGAGCCCGTTGTGCCATTTATTTATTCAATTCACTCCCAAGAAACTTGAA
CCTATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGA
GGATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAA
CCGCGGCTCAGACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCG
CCGCTCTTCGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGG
CATTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAA
CAGTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATC
CAGGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTG
CACTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGC
TGTTCTTGGCCCGAAAGCTGTCGCTTACCAGGGCAGTTTTTTACATGATA
ATGCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCA
GAAAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCACAG
GCTACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTT
CTTGTTTACACTGTCTTCTCGGCCACTGATGTCAAGCGCAATGCCCGCGA
TTC
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