FC931724

Overview
NameFC931724
Unique NameFC931724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA1_BACLD (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 58/206 (28.16%), Postives = 91/206 (44.17%), Query Frame = 1
Query:   82 VNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++G+W       +   +NPAN   IA    +   D +  ++A   A + W  +P P R  ++ +    L+E+   L  +++ E GK L +  GEVQ  I++ + A      + G  +P+     +    W  PLGVV  IT FNFP  V  W   +A+ CGN  V K             KLV E+F     P  +     GG ++
Sbjct:   13 IDGEWVNSLGAESEEVVNPANGNVIAYAPLSVRADVDRAVQAAKHAYQTWSLVPVPNRARLLYKYLQLLQEQKEQLADIITTENGKTLKDARGEVQRGIEVVELATATPTLMMGESLPA-IAGGIDGSIWRYPLGVVAGITPFNFPMMVPLWMFPLAIACGNTFVLK---PSERTPILAGKLV-ELFYEAGFPKGVLNLVHGGKDV 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_BURP6 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=betB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 48/197 (24.37%), Postives = 91/197 (46.19%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIG 693
            G T  + +PA  + +A V +AS +D +  + +  E  + W  + A +R  ++R+  + LRE+ + L  L   + GK + E    ++    D+ ++  GL+  + G  +P  RP   +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G   +G
Sbjct:   21 GKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNNALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPL-RPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALK----LAEIYTEAGVPAGVFNVVQGDGSVG 212          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 48/171 (28.07%), Postives = 81/171 (47.37%), Query Frame = 1
Query:   79 FVNGKWK--AHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            F+N +W       T  ++NP   + I  V E    D +  ++A  EA ++   W  + A +RG ++ ++ D +     +L  L +++ GK   E  + ++ EVI +  +  G + + +G  IP +   H       P+GV G I  +NFP  + GW    AL  GN VV K
Sbjct:   42 FINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVRAAREAFRLGSPWRRMDASERGRLLNRLADLVERDRVYLASLETLDNGKPFQESYVLDLDEVIKVYRYLAGWADKWHGKTIPMDG-EHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMK 211          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 54/190 (28.42%), Postives = 84/190 (44.21%), Query Frame = 1
Query:   79 FVNGKWKA--HGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEA---SKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEV 630
            F+N  W     G   ++ NP+  +KI  V E    D ++ ++A   A      W  L A  RG+++ Q+ D +      L  L +++ GK  L     +++  I    +  G + ++ G  IP++  N M      P+GV G IT +NFP  +L W    AL CGN VV K              L+ EV
Sbjct:   35 FINNDWHEPKSGRKFATYNPSTLEKICEVEEGDKPDVDKAVEAAQAAFQRGSPWRRLDALSRGQLLHQLADLIERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQGRTIPTD-DNVMCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEV 223          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_BURS3 (Betaine aldehyde dehydrogenase OS=Burkholderia sp. (strain 383) GN=betB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 49/197 (24.87%), Postives = 89/197 (45.18%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIG 693
            G T  + +PA  + +A V +AS  D +  + +  E  + W  + A +R  ++R+  D LRE+   L  L + + GK + E +  ++    D+ ++  GL+  + G  +P  R    +     PLGV   I A+N+P  +  W    AL  GN +V+K               ++E++    +P  +F    G   +G
Sbjct:   21 GKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPL-RAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALK----LAEIYTEAGVPAGVFNVVQGDGSVG 212          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ALDH4_YEAST (Potassium-activated aldehyde dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=ALD4 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 51/179 (28.49%), Postives = 86/179 (48.04%), Query Frame = 1
Query:   52 GLSPETP-GCFVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            GL  E P G F+N K+       T   INP+  ++I  + E   +D EE ++A   A  +  W  +    RG+ + ++ + + +    +  + +++ GK +    G+V  VI+    + G + +++G +I + R  H       PLGV G I  +NFP  +  W    ALV GN VV K
Sbjct:   38 GLEYEQPTGLFINNKFVPSKQNKTFEVINPSTEEEICHIYEGREDDVEEAVQAADRAFSNGSWNGIDPIDRGKALYRLAELIEQDKDVIASIETLDNGKAISSSRGDVDLVINYLKSSAGFADKIDGRMIDTGR-THFSYTKRQPLGVCGQIIPWNFPLLMWAWKIAPALVTGNTVVLK 215          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_LISMH (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=iolA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 56/206 (27.18%), Postives = 90/206 (43.69%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            +++G+W           INPA  + +  V  ++  + ++      +A + W ++  P+R  V+      L +    L RL+++E GK L E  GEVQ  I+  +FA G    + G  + S   +        P+GVVG I  FNFP  V  W   +A+  GN  + K             KLV E+F    LP  +F    G  ++
Sbjct:   10 YIDGEWVESKTDKYEDVINPATGEVLCQVPISTRAELDQAAVIAEQAFEKWSQVAVPRRARVLFSFQQLLIQHKEELARLITLENGKNLSEARGEVQRGIENVEFAAGAPTLMMGDSLASIATDVEAANYRYPVGVVGGIAPFNFPMMVPCWMFPMAIALGNSFILK---PSERTPLLMEKLV-ELFSEAGLPKGVFNVVYGAHDV 211          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_BURPS (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei GN=betB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 48/197 (24.37%), Postives = 90/197 (45.69%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIG 693
            G T  + +PA  + +A V +AS +D +  + +  E  + W  + A +R  ++R+  + LRE+   L  L   + GK + E    ++    D+ ++  GL+  + G  +P  RP   +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G   +G
Sbjct:   21 GKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPL-RPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALK----LAEIYTEAGVPAGVFNVVQGDGSVG 212          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 48/197 (24.37%), Postives = 90/197 (45.69%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIG 693
            G T  + +PA  + +A V +AS +D +  + +  E  + W  + A +R  ++R+  + LRE+   L  L   + GK + E    ++    D+ ++  GL+  + G  +P  RP   +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G   +G
Sbjct:   21 GKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPL-RPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALK----LAEIYTEAGVPAGVFNVVQGDGSVG 212          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 48/197 (24.37%), Postives = 90/197 (45.69%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIG 693
            G T  + +PA  + +A V +AS +D +  + +  E  + W  + A +R  ++R+  + LRE+   L  L   + GK + E    ++    D+ ++  GL+  + G  +P  RP   +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G   +G
Sbjct:   21 GKTFDTFDPATGELLARVQQASADDVDRAVASAREGQREWAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPL-RPESFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALK----LAEIYTEAGVPAGVFNVVQGDGSVG 212          
The following BLAST results are available for this feature:
BLAST of FC931724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 332
Match NameE-valueIdentityDescription
IOLA1_BACLD5.083e-1428.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_BURP65.083e-1424.37Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
AL1B1_RAT5.083e-1428.07Aldehyde dehydrogenase X, mitochondrial OS=Rattus ... [more]
AL1A3_RAT5.083e-1428.42Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
BETB_BURS36.638e-1424.87Betaine aldehyde dehydrogenase OS=Burkholderia sp.... [more]
ALDH4_YEAST6.638e-1428.49Potassium-activated aldehyde dehydrogenase, mitoch... [more]
IOLA_LISMH8.670e-1427.18Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_BURPS8.670e-1424.37Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP18.670e-1424.37Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP08.670e-1424.37Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]

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Properties
Property NameValue
Genbank descriptionC34108C07EF PostHarvP1 Citrus clementina cDNA clone C34108C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931724 ID=FC931724; Name=FC931724; organism=Citrus clementina; type=EST; length=726bp
GTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGAT
CGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGG
CACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATT
GCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGC
TTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAG
GGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAAAAACTGCATCAT
CTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAAT
TGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAA
GCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGTCCCAATCATATG
ATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATT
TAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCT
GCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACTCCTTTGATCACC
ATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAGGAACAAGTTACC
TGGTGCAATTTTTACCTCTTTTTGTGGTGGGGCTGAGATAGGTCAAGCAT
AGCGAAAGATCACGTATTCTCTGGTT
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