FC931724
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAAR (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=rocA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAAN (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=rocA PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAAM (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rocA PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAAE (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Newman) GN=rocA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAAC (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain COL) GN=rocA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAAB (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=rocA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAA9 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=rocA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAA8 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=rocA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAA3 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=rocA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: ROCA_STAA2 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain JH1) GN=rocA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 44/165 (26.67%), Postives = 75/165 (45.45%), Query Frame = 1 Query: 82 VNGKWKAHGPTVSSINPAN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573 +NG+ + SINPA+ +Q IA +A+ +D E+ KA +EA K W A R E++ ++ +R + + ++ E GK E +G+ E ID ++ L +R + +G I +NFP A++ +V GN V+ K Sbjct: 41 INGEKIFKDDKIKSINPADTSQVIANASKATKQDVEDAFKAANEAYKSWKTWSANDRAELMLRVSAIIRRRKAEIAAIMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLAQGKPVLDREGEHNKYFYKSIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLK 205 The following BLAST results are available for this feature:
BLAST of FC931724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 332
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931724 ID=FC931724; Name=FC931724; organism=Citrus clementina; type=EST; length=726bpback to top |