FC931724

Overview
NameFC931724
Unique NameFC931724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14856 contig Ccv1_Contig14856:144..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19
Identity = 59/210 (28.10%), Postives = 101/210 (48.10%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            ++NG +     G T +++NPAN + +A +  AS ED    + + +   K+W  + A  R  ++R+  D LRE+   L  L +++ GK + E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G GAE+GQ
Sbjct:   10 YINGAYVDSTDGKTFNAVNPANGEVLAEIQSASAEDVNRAVASAASGQKVWAAMTAMARSRILRRAVDILRERNDELAALETLDTGKAMSETTAVDIVTGADVLEYYAGLIPSIEGQQIPL-RDTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAEIYTEAGLPDGVFNVVTGSGAEVGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_ECO27 (Betaine aldehyde dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19
Identity = 62/199 (31.16%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            G T  +INPAN   +ATV  A  ED +  +K+  +  KIW  + A +R  ++R+  D LRE+   L +L +++ GK   E    ++    D+ ++  GL   L G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G GAE GQ
Sbjct:   21 GRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGCQIPL-RETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALK----LAEIYSEAGLPDGVFNVLPGVGAETGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA3_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 3 OS=Geobacillus kaustophilus GN=iolA3 PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19
Identity = 61/206 (29.61%), Postives = 95/206 (46.12%), Query Frame = 1
Query:   79 FVNGKWKAHGPTVSSI--NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            F+ G+W A       +  NPA  + +A V  +S E+ +  + A  EA + W ++P P+R  ++ +    L E    L RL+++E GK+  +  GEVQ  I+  +FA G+   + G  +P    +        PLGVV  IT FNFP  V  W   +A+ CGN  V K               ++E+F    LP  +     G  E+
Sbjct:   10 FIGGQWVASTSGKEEVVPNPATGEVLAKVPLSSREELDAAVAAAKEAFREWRKVPVPRRARILFRYQQLLVEHWDELARLVTLENGKVYEDAYGEVQRGIECVEFAAGIPTLMMGQQLPDIATDIESGMYRYPLGVVAGITPFNFPMMVPCWMFPLAIACGNTFVLK----PSERTPMLANRLAELFTEAGLPPGVLNIVHGAHEV 211          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOTN (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=iolA1 PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.018e-19
Identity = 61/206 (29.61%), Postives = 94/206 (45.63%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++ G+W       T +  NPA  + +A V  ++ ED +  + A  EA K W + P P+R  ++ +    L E    L RL+++E GK   E  GE+Q  I+  +FA G    + G  +PS            P+GVVG IT FNFP  V  W   +A+ CGN  V K               ++E+F+   LP  +     G  ++
Sbjct:   11 YIGGQWVESRSAKTEAVPNPATGEVLAYVPISTREDLDRAVAAAKEAFKTWSKTPVPRRARILFKYQQLLVEHWEELARLVTLENGKSYNEAYGEIQRGIECVEFAAGAPTLMMGRQLPSIATGIESGMYRYPIGVVGGITPFNFPMMVPCWMFPLAIACGNTFVLK----PSERTPMLANRLAELFKEAGLPDGVLNIVHGAHDV 212          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.248e-19
Identity = 61/210 (29.05%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            ++ G++   + G T  +INPAN + +A V  AS ED E  +++  E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G G E+GQ
Sbjct:   10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALK----LAEIYTEAGVPDGVFNVLTGSGREVGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.248e-19
Identity = 61/210 (29.05%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            ++ G++   + G T  +INPAN + +A V  AS ED E  +++  E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G G E+GQ
Sbjct:   10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTTLK----LAEIYTEAGVPDGVFNVLTGSGREVGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.248e-19
Identity = 61/210 (29.05%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            ++ G++   + G T  +INPAN + +A V  AS ED E  +++  E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G G E+GQ
Sbjct:   10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALK----LAEIYTEAGVPDGVFNVLTGSGREVGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.248e-19
Identity = 61/210 (29.05%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            ++ G++   + G T  +INPAN + +A V  AS ED E  +++  E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G G E+GQ
Sbjct:   10 YIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDLLRERNDELAALETLDTGKPLAETRAVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALK----LAEIYTEAGVPDGVFNVLTGSGREVGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA2_OCEIH (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Oceanobacillus iheyensis GN=iolA2 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.994e-18
Identity = 61/206 (29.61%), Postives = 92/206 (44.66%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++ G+W       T    NPA  + IA V  ++ ED    ++  +EA K W E+P PKR  ++ +    L E    L +L+++E GK   E  GEVQ  I+  +FA G    + G  + S            P+GV+G IT FNFP  V  W   +A+  GN  V K               ++E+ E   LP  +F    G  ++
Sbjct:   12 YIGGEWIESRTEKTEDVFNPATGEVIAQVPISTTEDVHHAIEVANEAFKTWKEVPVPKRARILFKYQQLLVEHWEELAKLITLENGKNYAEAYGEVQRGIENVEFATGAPSLMMGEQLASIATELESGVYRYPIGVIGGITPFNFPMMVPCWMFPMAIATGNTFVMK----PSERTPLLANRLAELLEEAGLPNGVFNIVHGAHDV 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSEMY (Betaine aldehyde dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.994e-18
Identity = 61/210 (29.05%), Postives = 102/210 (48.57%), Query Frame = 1
Query:   79 FVNGKWKA--HGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            ++ G++ A   G T  SINPA  + +A V  AS  D +  + + +E  K+W  + A +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL   + G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G E+GQ
Sbjct:   10 YIGGQYVAASSGQTFDSINPATGEVLAKVQRASQADVDRAVASAAEGQKVWAAMTAMQRSRILRRAVDILRERNDELAELETLDTGKPLSETRYVDIVTGADVLEYYAGLIPAIEGEQIPL-RESSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAEIYTEAGLPAGVFNVLTGSGREVGQ 214          
The following BLAST results are available for this feature:
BLAST of FC931724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 332
Match NameE-valueIdentityDescription
BETB_SERP53.076e-1928.10Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
BETB_ECO273.076e-1931.16Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
IOLA3_GEOKA4.018e-1929.61Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_GEOTN4.018e-1929.61Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEAE5.248e-1929.05Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEAB5.248e-1929.05Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA85.248e-1929.05Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA75.248e-1929.05Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
IOLA2_OCEIH1.994e-1829.61Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEMY1.994e-1829.05Betaine aldehyde dehydrogenase OS=Pseudomonas mend... [more]

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Properties
Property NameValue
Genbank descriptionC34108C07EF PostHarvP1 Citrus clementina cDNA clone C34108C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931724 ID=FC931724; Name=FC931724; organism=Citrus clementina; type=EST; length=726bp
GTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGAT
CGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGG
CACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATT
GCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGC
TTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAG
GGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAAAAACTGCATCAT
CTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAAT
TGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAA
GCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGTCCCAATCATATG
ATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATT
TAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCT
GCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACTCCTTTGATCACC
ATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAGGAACAAGTTACC
TGGTGCAATTTTTACCTCTTTTTGTGGTGGGGCTGAGATAGGTCAAGCAT
AGCGAAAGATCACGTATTCTCTGGTT
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