FC931724

Overview
NameFC931724
Unique NameFC931724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14856 contig Ccv1_Contig14856:144..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: XYLC_PSEPU (Benzaldehyde dehydrogenase [NAD+] OS=Pseudomonas putida GN=xylC PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.604e-18
Identity = 59/210 (28.10%), Postives = 97/210 (46.19%), Query Frame = 1
Query:   73 GCFVNGKW-KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA 699
            G   +  W +A G   + ++P+N   +     A+ ED +  + A   A K W  +P  +R  +VR+  + L+E+ +        E G I P+G+ E     +    A GL+   NG++ PS  P  M L    P+GVVGVI  +NFP  +   +   AL  GN V+ K              L++E+F    +P  +     GGA++G++
Sbjct:   12 GKVFSSNWVEARGGVANVVDPSNGDILGITGVANGEDVDAAVNAAKRAQKEWAAIPFSERAAIVRKAAEKLKEREYEFADWNVRECGAIRPKGLWEAGIAYEQMHQAAGLASLPNGTLFPSAVPGRMNLCQRVPVGVVGVIAPWNFPLFLAMRSVAPALALGNAVILK---PDLQTAVTGGALIAEIFSDAGMPDGVLHVLPGGADVGES 218          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_BACP2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus pumilus (strain SAFR-032) GN=iolA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.604e-18
Identity = 60/206 (29.13%), Postives = 94/206 (45.63%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++ G+W       T +  NPA  + IA V  ++ +D E  ++A  EA   W + P P+R  ++ +    L +K   L  L+++E GK + E  GEVQ  I+  +FA G    + G  +P             P+GV+G IT FNFP  V  W   +A+ CGN  V K               ++E+FE   LP  +     G  ++
Sbjct:   12 YIGGQWIEAETSQTEAVYNPATGKIIAEVPLSTKKDVERAVQAAQEAFTTWSKTPVPRRARILFKYQQLLVDKWDELAELVTMENGKSITEAKGEVQRGIECVEFAAGAPTLMMGKQLPDIASGLESGMYRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLK----PSERTPILAARLAELFEEAGLPKGVLNIVNGAHDV 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.401e-18
Identity = 60/196 (30.61%), Postives = 95/196 (48.47%), Query Frame = 1
Query:  112 TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIG 693
            T  SINPAN + +A V EA   D E  +++  +  +IW  L   +R  ++R+  D LRE+   L  L +++ GK L E    ++    D+ ++  GL+  + G  IP  R +  +     PLGVV  I A+N+P  +  W A  AL  GN +++K               ++E+F    LP  +F    G GA +G
Sbjct:   23 TFESINPANGEVLAEVAEAGAADLERAVESAEQGQRIWAALTGIERARIMRRAVDLLRERNDELALLETLDTGKPLSETRSVDIITGADVLEYYAGLAPAIEGEQIPL-RDSSFVYTRREPLGVVAGIGAWNYPIQIALWKAAPALAAGNAMIFKPSEVTPLSALR----LAEIFSEAGLPDGVFNVLTGSGAGVG 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18
Identity = 59/199 (29.65%), Postives = 97/199 (48.74%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            G T  ++NPA  + IA V  AS  D E  +++ SE  K+W  + A +R  ++R+  + LRE+   L  L +++ GK L E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +V+K               ++E++    +P  +F    G G EIGQ
Sbjct:   21 GKTFKTVNPATGEVIAEVQVASQADVERAVQSASEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPL-RESSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIR----LAEIYTEAGVPAGVFNVVQGPGREIGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA1_OCEIH (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Oceanobacillus iheyensis GN=iolA1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18
Identity = 61/207 (29.47%), Postives = 92/207 (44.44%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++NGKW     G      NPA  + IATV  + +ED +  + A  E    W ++P P R   +      L++    L +++++E GK L +  GEVQ  I++ + A      + G  +PS     +    W  PLGVV  IT FNFP  V  W   +A+ CGN  V K             + + E+F     P  +     GG E+
Sbjct:   12 YINGKWVDAKSGKQEVIPNPATGETIATVTISDVEDVDMAVAAAKEVFPEWSDIPVPNRTRYLLDYWKLLQDNKEELAKIITLENGKSLRDAQGEVQRGIEVVELATSTPSMMMGDALPSIAKG-IDGSIWRYPLGVVAGITPFNFPMMVPLWMFPLAIACGNTFVLK----TSERTPILAERLVELFYEAGFPKGVLNLVHGGKEV 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSESM (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. tomato GN=betB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18
Identity = 58/196 (29.59%), Postives = 95/196 (48.47%), Query Frame = 1
Query:  112 TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIG 693
            T  SINPAN + +A +  AS ED E  + A  +  KIW  + A +R  ++R+  D LRE+   L  L +++ GK + E    ++    D+ ++  GL   + G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G G E+G
Sbjct:   23 TFDSINPANGEVLAKIQRASKEDVERAVVAAEKGQKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPL-RDSSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLK----LAEIYTEAGVPNGVFNVLTGSGREVG 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18
Identity = 48/176 (27.27%), Postives = 92/176 (52.27%), Query Frame = 1
Query:   52 GLSPETP-GCFVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            G S + P G ++NG+W     T  +++P+  + IA V  A  ++ +  +K+  EA K W ++P  ++GE++ ++ +   +    L  + +++ GK ++    G+V   I +  +  G + ++ G VIP+  P  +      P+GV G I  +N+P  + GW    AL  GNC++ K
Sbjct:   14 GKSVKQPIGLYINGEWHKSAETWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKTWKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIYGQVIPT-GPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIK 188          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus kaustophilus GN=iolA1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17
Identity = 58/170 (34.12%), Postives = 83/170 (48.82%), Query Frame = 1
Query:   79 FVNGKWKAHG--PTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG---SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            ++ G+W A     T+   NPA  + +A V  ++ ED ++ ++A  +A   W ++P PKR  ++      L +    L  L+  E GK   E  GE+Q  I+  +FA G    L G   S I  E  + M      PLGVV  IT FNFP  V  W   +A+VCGN  V K
Sbjct:   14 YIGGQWVASSGTETLEVPNPATGEVLARVPISTKEDVDQAVQAAKKAFATWKDVPVPKRARIMFSFHHLLNQHHEELAELVVQENGKAYKEAYGEIQRGIECVEFAAGAPTLLMGESLSNIAEEIDSEMFR---YPLGVVAGITPFNFPMMVPLWMFPLAIVCGNTFVLK 180          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA1_BACWK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus weihenstephanensis (strain KBAB4) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 54/167 (32.34%), Postives = 87/167 (52.10%), Query Frame = 1
Query:   82 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A K W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYKTWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSAPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 57/187 (30.48%), Postives = 89/187 (47.59%), Query Frame = 1
Query:   79 FVNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSE 627
            F++G+W  A    + SI NP N ++IATV E   ED  + + A   A     W  L   +RG++V +I + +R  L  L  L S++ GK L E   ++ ++ ++  +  GL+ +  G +I S  P+        P+GV G IT +N+P     W    AL  GN +V K             KL+ E
Sbjct:    6 FIDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAARRAFDKGEWSSLSGLERGKIVLKIAELIRRDLEELAELESLDTGKTLEESKADMDDIANVFQYYAGLADKDGGEIISSPIPDSESKIIREPIGVCGQITPWNYPLLQASWKIAPALAAGNTIVMKPSEITPLTTIKVFKLMEE 192          
The following BLAST results are available for this feature:
BLAST of FC931724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 332
Match NameE-valueIdentityDescription
XYLC_PSEPU2.604e-1828.10Benzaldehyde dehydrogenase [NAD+] OS=Pseudomonas p... [more]
IOLA_BACP22.604e-1829.13Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEU53.401e-1830.61Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
BETB_STRMK5.802e-1829.65Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
IOLA1_OCEIH7.577e-1829.47Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSESM7.577e-1829.59Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
YLX7_SCHPO9.896e-1827.27Putative aldehyde dehydrogenase-like protein C922.... [more]
IOLA1_GEOKA1.688e-1734.12Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA1_BACWK2.205e-1732.34Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_BACSU2.205e-1730.48Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]

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Properties
Property NameValue
Genbank descriptionC34108C07EF PostHarvP1 Citrus clementina cDNA clone C34108C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931724 ID=FC931724; Name=FC931724; organism=Citrus clementina; type=EST; length=726bp
GTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGAT
CGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGG
CACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATT
GCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGC
TTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAG
GGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAAAAACTGCATCAT
CTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAAT
TGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAA
GCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGTCCCAATCATATG
ATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATT
TAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCT
GCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACTCCTTTGATCACC
ATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAGGAACAAGTTACC
TGGTGCAATTTTTACCTCTTTTTGTGGTGGGGCTGAGATAGGTCAAGCAT
AGCGAAAGATCACGTATTCTCTGGTT
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