FC931724

Overview
NameFC931724
Unique NameFC931724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_BACCN (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=iolA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17
Identity = 60/206 (29.13%), Postives = 97/206 (47.09%), Query Frame = 1
Query:   82 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E  ++A   A + W ++P P R  ++ +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+     +    W  PLGVV  IT FNFP  +  W   +A+ CGN  V K             + + E+F     P  +     GG E+
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVERAVEAAKNAYETWSKVPVPNRSRMLYKYLQLLQENKDELSKIITLENGKTLKDASGEVQRGIEAVELATSAPNLMMGQALPN-IAGGIDGSIWRYPLGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK----TSERTPLLAERLVELFYEAGFPKGVLNLVQGGKEV 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17
Identity = 58/199 (29.15%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            G T  ++NPA    IA V  AS  D E  +++ +E  K+W  + A +R  ++R+  + LRE+   L  L +++ GK L E    ++    D+ ++  GL+  + G  +P  R +        PLGVV  I A+N+P  +  W +  AL  GN +V+K               ++E++    +P  +F    G G EIGQ
Sbjct:   21 GKTFRTVNPATGDVIAEVQVASQADVERAVQSAAEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPL-RESSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIR----LAEIYTEAGVPAGVFNVVQGPGREIGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: LADH_META3 (Lactaldehyde dehydrogenase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1030 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 55/204 (26.96%), Postives = 92/204 (45.10%), Query Frame = 1
Query:   79 FVNGKWKAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            F+NG+W  +   +   NP NN+ I  +   S  + +E +K   E       L    R  ++ +I   L +    L +L++I++GK + + I EV   I    F+   SR+L G  IP +  + M++    P+G+VG IT FNFP  +       A+  GN +V               K++ +V +  K+P  +F    G   I
Sbjct:    2 FINGEW-INRKDIEVKNPYNNEIIGYIPSLSRNETKEAIKIAEEHKSTMKNLSPTIRYNILMKIASELSKNKRELAKLITIDVGKPIKQSIIEVDRTITTFKFSAFYSRELRGETIPFD--DGMVITKREPVGLVGAITPFNFPLNLFAHKIAPAIAMGNSIVAHPSSKAPMITIELTKIIEKVLKSKKIPLGVFNLLTGEGHI 202          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA2_BACCZ (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus cereus (strain ZK / E33L) GN=iolA2 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 55/174 (31.61%), Postives = 82/174 (47.13%), Query Frame = 1
Query:   58 SPETPGCFVNGKWKAHGPTVSSI--NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            +P+    ++ G+W     T      NPA  + IA V  ++  D E+ + A +EA K W +   PKR  ++ +    L +    L +L++IE GK   E  GEV   I+  +FA G    + G  +P             P+GV+G IT FNFP  V  W   +A+ CGN  V K
Sbjct:    6 APQIVKNYIGGEWVESISTKMEAVYNPATGEVIAQVPLSTKVDVEQAVSAANEAFKSWSKTAVPKRARILFKYQQLLVDNWEELAKLITIENGKSYNEAYGEVLRGIECVEFAAGAPTLMMGKQLPDIATGIESGMYRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLK 179          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 57/210 (27.14%), Postives = 102/210 (48.57%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            ++NG +   A G T  ++NPAN + IA +  A+ +D ++ + A  +   +W  + A +R  ++R+  D LR++   L  + + + GK L E    ++    D+ ++  GL   L G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G ++GQ
Sbjct:   10 YINGAYTDSASGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPL-RGSAFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAEIYTEAGLPAGVFNVLTGSGDQVGQ 214          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSE14 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=betB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17
Identity = 56/196 (28.57%), Postives = 94/196 (47.96%), Query Frame = 1
Query:  112 TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIG 693
            T  +INPAN + +A +  A  ED E  + A  +  KIW  + A +R  ++R+  D LRE+   L  L +++ GK + E    ++    D+ ++  GL   + G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G G E+G
Sbjct:   23 TFDAINPANGEVLAQIQRAGKEDVERAVVAAEKGQKIWAAMTAVERSRILRRAVDILRERNDELAALETLDTGKAISETRYVDIVTGADVLEYYAGLVPAIEGEQIPL-RDSSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLK----LAEIYTEAGVPNGVFNVLTGSGREVG 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_BACCQ (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain Q1) GN=iolA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:   82 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_BACC7 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain AH187) GN=iolA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:   82 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_BACC1 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus cereus (strain ATCC 10987) GN=iolA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 53/167 (31.74%), Postives = 87/167 (52.10%), Query Frame = 1
Query:   82 VNGKW-KAHGPTVSSI-NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            +NG+W ++ G  V ++ NPA  + IA V  +  ED E+ ++A   A + W ++P P R   + +    L+E    L +++++E GK L +  GEVQ  I+  + A      + G  +P+   + +    W  P+GVV  IT FNFP  +  W   +A+ CGN  V K
Sbjct:   13 INGEWVESTGTEVEAVPNPATGKIIAYVPLSPKEDVEKAVEAAKAAYETWSKVPVPNRSRQLYKYLQLLQENKEELAKIITLENGKTLTDATGEVQRGIEAVELATSTPNLMMGQALPN-IASGIDGSIWRYPIGVVAGITPFNFPMMIPLWMFPLAIACGNTFVLK 178          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_BACA2 (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus amyloliquefaciens (strain FZB42) GN=iolA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 57/206 (27.67%), Postives = 95/206 (46.12%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++NG+W           INPA  + +  V  ++ ED E  +++ SEA + W +   P+R  ++      L++    L RL+++E GK   E +GEV   I+  +FA G    + G  + S   +        P+GVVG I  FNFP  V  W   +A+  GN  + K             + ++E+FE+  LP  +F    G  ++
Sbjct:   10 YINGEWVESKTDQYEDVINPATKEVMCQVPISTREDVEYAVRSASEAFQTWSKTAVPRRARILFNYQQLLQQNKEELARLITLENGKNTTEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAISLGNTFILK----PSERTPLLTEKLAELFEQAGLPKGVFNVVHGAHDV 211          
The following BLAST results are available for this feature:
BLAST of FC931724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 332
Match NameE-valueIdentityDescription
IOLA_BACCN2.879e-1729.13Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_STRM52.879e-1729.15Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
LADH_META33.761e-1726.96Lactaldehyde dehydrogenase OS=Methanococcus aeolic... [more]
IOLA2_BACCZ4.912e-1731.61Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_YERP34.912e-1727.14Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_PSE144.912e-1728.57Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
IOLA_BACCQ6.415e-1731.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC76.415e-1731.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACC16.415e-1731.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACA26.415e-1727.67Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionC34108C07EF PostHarvP1 Citrus clementina cDNA clone C34108C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931724 ID=FC931724; Name=FC931724; organism=Citrus clementina; type=EST; length=726bp
GTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGAT
CGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGG
CACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATT
GCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGC
TTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAG
GGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAAAAACTGCATCAT
CTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAAT
TGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAA
GCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGTCCCAATCATATG
ATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATT
TAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCT
GCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACTCCTTTGATCACC
ATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAGGAACAAGTTACC
TGGTGCAATTTTTACCTCTTTTTGTGGTGGGGCTGAGATAGGTCAAGCAT
AGCGAAAGATCACGTATTCTCTGGTT
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