FC931724

Overview
NameFC931724
Unique NameFC931724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_BACSU (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis GN=iolA PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16
Identity = 58/206 (28.16%), Postives = 92/206 (44.66%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++NG+W           +NPA  + +  V  ++ ED +   +  +EA K W ++  P+R  ++      L +    L  L++IE GK   E +GEV   I+  +FA G    + G  + S   +        P+GVVG I  FNFP  V  W   +A+  GN  + K             KLV E+FE+  LP  +F    G  ++
Sbjct:   10 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILK---PSERTPLLTEKLV-ELFEKAGLPKGVFNVVYGAHDV 211          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA2_BACLD (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=iolA2 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16
Identity = 58/206 (28.16%), Postives = 92/206 (44.66%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++NG+W           +NPA  + +  V  ++ ED E   +  +EA K W ++  P+R  ++      L +    L  L++IE GK   E +GEV   I+  +FA G    + G  + +   +        P+GVVG I  FNFP  V  W   +A+  GN  + K             KLV E+FE+  LP  +F    G  ++
Sbjct:   10 YINGEWVESKTDKYEDVVNPATKEVLCQVPISTREDIEYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLTQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLATIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILK---PSERTPLLTEKLV-ELFEKAGLPKGVFNVVYGAHDV 211          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16
Identity = 56/196 (28.57%), Postives = 93/196 (47.45%), Query Frame = 1
Query:  112 TVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIG 693
            T  +INPAN + +A V  A+ ED E  + +  +  KIW  + A +R  ++R+  + LRE+   L  L +++ GK   E    ++    D+ ++  GL   + G  IP  R    +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++E++    LP  +F    G G E+G
Sbjct:   23 TFDAINPANGEVLAQVQRATKEDVERAVVSAEKGQKIWAAMTAMERSRILRRAVEILRERNDELAALETLDTGKAFSETKYVDIVTGADVLEYYAGLVPAIEGEQIPL-RTTSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTSLTTLK----LAEIYTEAGLPDGVFNVLTGSGREVG 213          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16
Identity = 52/197 (26.40%), Postives = 94/197 (47.72%), Query Frame = 1
Query:  106 GPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIG 693
            G T  +++PA  + +A+V +AS  D E  +++  E  + W  L A +R  V+R+  + LRE+   L  L + + GK + E +  ++    D+ ++  GL+  + G  IP  RP   +     PLGV   I A+N+P  +  W +  AL  GN +++K               ++E++    +P  +F    G   +G
Sbjct:   21 GETFDTLDPATGETLASVQQASAADVERAVQSAREGQREWAALTAMQRSRVLRRAVEILRERNDELAALETRDTGKPIAETLAVDIATGADVIEYYAGLATAIEGQQIPL-RPTSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEITPLSALK----LAEIYTEAGVPAGVFNVVQGDGRVG 212          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA2_BACAN (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus anthracis GN=iolA2 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 53/167 (31.74%), Postives = 79/167 (47.31%), Query Frame = 1
Query:   79 FVNGKWKAHGPTVSSI--NPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            ++ G+W     T      NPA  + IA V  ++  D E+ + A +EA K W +   P+R  ++ +    L +    L +L++IE GK   E  GEV   I+  +FA G    + G  +P             P+GV+G IT FNFP  V  W   +A+ CGN  V K
Sbjct:   12 YIGGEWVESISTKMEAVYNPATGEVIAQVPLSTKVDVEQAVLAANEAFKSWSKTAVPRRARILFKYQQLLVDNWEELAKLITIENGKSYNEAYGEVLRGIECVEFAAGAPTLMMGKQLPDIATGIESGMYRYPIGVIGGITPFNFPMMVPCWMFPLAIACGNTFVLK 178          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: SSDH_ARATH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16
Identity = 65/221 (29.41%), Postives = 99/221 (44.80%), Query Frame = 1
Query:   82 VNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQA------*RKITYS 720
            + GKW       T+   NPA  + IA V     ++  + + +  EA   W  L A +R +V+R+  D L      LG+L+++E GK L E IGEV       ++    ++++ G +IP    +  +L    P+GVVG IT +NFP A++      AL  G  VV K             +L     +    PGA+        EIG A       RKIT++
Sbjct:   57 IGGKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAEL---ALQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFT 274          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA1_BACSK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus clausii (strain KSM-K16) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.430e-16
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 1
Query:   79 FVNGKWKAHGPTVSS--INPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 573
            ++NGKW     ++    +NPA  + I  V  ++  D E  ++A   A   W ++  P+R  ++      L+     L RL++IE GK L E  GEVQ  I+  +FA G    + G  +P    +        P+GVVG I  FNFP  V  W   +A+  GN  + K
Sbjct:   14 YINGKWIESSTSLYEDVVNPATKEVICQVPLSTKADVEYAVEAAKTAFAKWSKVAVPRRARILFNYQQLLQRDKEELARLITIENGKNLTEARGEVQRGIENVEFAAGAPSLMMGDSLPMIATDVEASNYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNAFLLK 180          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: IOLA_BACNA (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Bacillus subtilis subsp. natto GN=iolA PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 57/206 (27.67%), Postives = 92/206 (44.66%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEI 690
            ++NG+W           +NPA  + +  V  ++ ED +   +  +EA + W ++  P+R  ++      L +    L  L++IE GK   E +GEV   I+  +FA G    + G  + S   +        P+GVVG I  FNFP  V  W   +A+  GN  + K             KLV E+FE+  LP  +F    G  ++
Sbjct:   10 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFETWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILK---PSERTPLLTEKLV-ELFEKAGLPKGVFNVVYGAHDV 211          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_VIBSL (Betaine aldehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=betB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16
Identity = 58/214 (27.10%), Postives = 96/214 (44.86%), Query Frame = 1
Query:   64 ETPGCFVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQ 696
            E    +++GK      G T  SINPAN + IAT+ +AS  D E  +++      +W  + A +R  ++ +  + LR + + L  L  ++ GK L E I  +V    D+ ++  GL+  L G   P             PLG+   I A+N+P  +  W +  AL  GN +++K               ++E+F    LP  +F    G   +GQ
Sbjct:    2 EMNSLYIDGKAVDATSGETFVSINPANGEPIATLGQASSADVENAIESAKRGFAVWSAMTAVERSRILLKAVEILRARNNDLANLEVVDTGKPLQEAIEVDVASGADVIEYFAGLAPTLQGDQQPLS-DTQFFYTRREPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALK----LAEIFTEAGLPDGVFNVVQGDYRVGQ 210          
BLAST of FC931724 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 55/210 (26.19%), Postives = 100/210 (47.62%), Query Frame = 1
Query:   79 FVNGKW--KAHGPTVSSINPANNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQ 696
            ++NG +     G T  ++NPAN + IA +  A+ +D ++ + A  +   +W  + A +R  ++R+  D LR++   L  + + + GK L E    ++    D+ ++  GL   L G  IP  R +  +     PLGVV  I A+N+P  +  W +  AL  GN +++K               ++ ++    LP  +F    G G ++GQ
Sbjct:   10 YINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQGQPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPL-RGSAFVYTRREPLGVVAGIGAWNYPLQIALWKSAPALAAGNAMIFKPSEVTSLTALK----LAGIYTEAGLPAGVFNVLTGSGDQVGQ 214          
The following BLAST results are available for this feature:
BLAST of FC931724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 332
Match NameE-valueIdentityDescription
IOLA_BACSU2.438e-1628.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA2_BACLD2.438e-1628.16Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEF52.438e-1628.57Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_BURXL2.438e-1626.40Betaine aldehyde dehydrogenase OS=Burkholderia xen... [more]
IOLA2_BACAN3.184e-1631.74Methylmalonate semialdehyde dehydrogenase [acylati... [more]
SSDH_ARATH4.158e-1629.41Succinate-semialdehyde dehydrogenase, mitochondria... [more]
IOLA1_BACSK5.430e-1631.14Methylmalonate semialdehyde dehydrogenase [acylati... [more]
IOLA_BACNA7.092e-1627.67Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_VIBSL7.092e-1627.10Betaine aldehyde dehydrogenase OS=Vibrio splendidu... [more]
BETB_YERPS9.263e-1626.19Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]

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Properties
Property NameValue
Genbank descriptionC34108C07EF PostHarvP1 Citrus clementina cDNA clone C34108C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931724 ID=FC931724; Name=FC931724; organism=Citrus clementina; type=EST; length=726bp
GTTGCAGAGATGGAATTTGCAAAGCAAGAGTACGAGTTTCTGAGTGAGAT
CGGCTTAAGTCCAGAAACTCCTGGATGTTTTGTGAATGGCAAGTGGAAGG
CACATGGTCCTACTGTCTCCTCTATCAATCCTGCTAACAATCAGAAAATT
GCTACTGTTGTGGAGGCTTCACTTGAGGATTATGAGGAAGGCATGAAAGC
TTGCAGCGAAGCATCTAAGATATGGATGGAACTTCCAGCTCCTAAGAGAG
GGGAGGTTGTTAGACAAATAGGTGATGCATTGAGAGAAAAACTGCATCAT
CTCGGCCGTCTTCTTTCAATTGAGATGGGAAAAATTCTTCCAGAAGGAAT
TGGGGAAGTCCAAGAAGTTATTGACATGTGTGATTTTGCTGTGGGTTTAA
GCCGGCAACTTAATGGATCAGTAATACCTTCAGAACGTCCCAATCATATG
ATGTTAGAGACATGGAATCCTCTTGGGGTAGTTGGTGTCATTACAGCATT
TAACTTCCCGTGTGCTGTTCTTGGATGGAATGCATGCATTGCACTAGTCT
GCGGCAACTGTGTTGTTTGGAAAGGTGCTCCAACAACTCCTTTGATCACC
ATAGCAATAACAAAGCTGGTGTCTGAGGTTTTCGAGAGGAACAAGTTACC
TGGTGCAATTTTTACCTCTTTTTGTGGTGGGGCTGAGATAGGTCAAGCAT
AGCGAAAGATCACGTATTCTCTGGTT
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