FC931728

Overview
NameFC931728
Unique NameFC931728
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_ANASP (Ribose-phosphate pyrophosphokinase OS=Anabaena sp. (strain PCC 7120) GN=prs PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.622e-28
Identity = 41/64 (64.06%), Postives = 55/64 (85.94%), Query Frame = 2 
Query:  449 TTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            T N+R++LFSG++N  LSQE+A Y+G++LG +  KRFADGE+YVQ+QES+RGCDVYL+QP C P
Sbjct:   17 TENHRLRLFSGSSNVQLSQEVARYLGMDLGPMIRKRFADGELYVQIQESIRGCDVYLIQPCCQP 80

HSP 2 Score: 52.373 bits (124), Expect = 2.622e-28
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C  PV  +++LMELLIM+DACRRASA+ +TAVIP  GY
Sbjct:   77 CCQPV--NDHLMELLIMVDACRRASARQVTAVIPYYGY 112
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_SYNE7 (Ribose-phosphate pyrophosphokinase OS=Synechococcus elongatus (strain PCC 7942) GN=prs PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.785e-28
Identity = 41/62 (66.13%), Postives = 56/62 (90.32%), Query Frame = 2 
Query:  455 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N+R++LFSG++N ALSQE++ Y+G++LG +  KRFADGE+YVQ+QES+RGCDVYL+QPTC P
Sbjct:   19 NHRLRLFSGSSNSALSQEVSRYLGIDLGPMIRKRFADGELYVQIQESIRGCDVYLMQPTCWP 80

HSP 2 Score: 50.447 bits (119), Expect = 5.785e-28
Identity = 23/31 (74.19%), Postives = 28/31 (90.32%), Query Frame = 3 
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            +++LMELLIMIDACRRASA+ ITAV+P  GY
Sbjct:   82 NDHLMELLIMIDACRRASARQITAVLPYYGY 112
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_PROMP (Ribose-phosphate pyrophosphokinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=prs PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.163e-27
Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 2 
Query:  401 LPKFLETARMEKTVNRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +  F+     E+     TN+R++L SGT+NP L++EIA Y+G+E   +  KRFADGE+YVQ+Q+S+RGCDV+L+QPTC P
Sbjct:    1 MTSFITAVDNEEPTFNLTNSRLRLVSGTSNPKLAEEIASYLGIENVPLVSKRFADGELYVQIQQSIRGCDVFLIQPTCAP 80

HSP 2 Score: 49.6766 bits (117), Expect = 2.163e-27
Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    +++LMEL+IM+DAC+RASA+ ITAVIP  GY
Sbjct:   78 CAPV---NDSLMELMIMVDACKRASARQITAVIPYFGY 112
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_GLOVI (Ribose-phosphate pyrophosphokinase OS=Gloeobacter violaceus GN=prs PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.933e-26
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 2 
Query:  404 PKFLETARMEKTVNRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            P  L      + V    + R++LFSG+ANP L+Q +A Y+G+  G +  K FADGE+YVQ+QES+RGCDVYLVQPTC P
Sbjct:    4 PDLLPRRSTVQPVRLMGDERLRLFSGSANPELAQLVARYLGLAPGPLVRKSFADGELYVQIQESIRGCDVYLVQPTCSP 82

HSP 2 Score: 50.8322 bits (120), Expect = 3.933e-26
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            CSP    +++LMELLI+IDACRRASA+ ITAV+P  GY
Sbjct:   80 CSPV---NDSLMELLILIDACRRASARQITAVLPYYGY 114
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_PROMA (Ribose-phosphate pyrophosphokinase OS=Prochlorococcus marinus GN=prs PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.129e-25
Identity = 40/75 (53.33%), Postives = 58/75 (77.33%), Query Frame = 2 
Query:  419 TARMEKTVNRTTN-NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            TA   + +  + N +R+KL SGT+NP L++EI+ Y+G+E   +  KRFADGE+YVQ+Q+S+RGCDV+L+QPTC P
Sbjct:    2 TAATAQNIKSSLNTDRLKLISGTSNPILAKEISSYIGIEDVPVVSKRFADGELYVQIQQSIRGCDVFLIQPTCAP 76

HSP 2 Score: 49.2914 bits (116), Expect = 1.129e-25
Identity = 22/38 (57.89%), Postives = 31/38 (81.58%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    +++LMEL+IM+DAC+RASA+ +TAVIP  GY
Sbjct:   74 CAPV---NDSLMELMIMVDACKRASARQVTAVIPYFGY 108
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_STAS1 (Ribose-phosphate pyrophosphokinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=prs PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.065e-22
Identity = 33/66 (50.00%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N  L+QE+A ++G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P
Sbjct:    4 NEYKNSALKIFSLKGNEPLAQEVADHVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSNP 69

HSP 2 Score: 47.7506 bits (112), Expect = 1.065e-22
Identity = 26/37 (70.27%), Postives = 27/37 (72.97%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            S PV  H  LMELLIMIDACRRASA NI  V+P  GY
Sbjct:   67 SNPVNLH--LMELLIMIDACRRASAANINIVVPYYGY 101
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_STAES (Ribose-phosphate pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=prs PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.970e-22
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N  L+QE+A ++G+ELGK ++KRF+DGEI + ++ES+RGCDV++VQPT  P
Sbjct:    4 NEYKNSSMKIFSLKGNEPLAQEVADHVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIVQPTSYP 69

HSP 2 Score: 46.2098 bits (108), Expect = 3.970e-22
Identity = 25/37 (67.57%), Postives = 27/37 (72.97%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            S PV  H  LMELLIMIDAC+RASA NI  V+P  GY
Sbjct:   67 SYPVNLH--LMELLIMIDACKRASAANINIVVPYYGY 101
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_STAEQ (Ribose-phosphate pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=prs PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.970e-22
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N  L+QE+A ++G+ELGK ++KRF+DGEI + ++ES+RGCDV++VQPT  P
Sbjct:    4 NEYKNSSMKIFSLKGNEPLAQEVADHVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIVQPTSYP 69

HSP 2 Score: 46.2098 bits (108), Expect = 3.970e-22
Identity = 25/37 (67.57%), Postives = 27/37 (72.97%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            S PV  H  LMELLIMIDAC+RASA NI  V+P  GY
Sbjct:   67 SYPVNLH--LMELLIMIDACKRASAANINIVVPYYGY 101
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_STAHJ (Ribose-phosphate pyrophosphokinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=prs PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.720e-22
Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N  L+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P
Sbjct:    4 NEYKNSSLKIFSLKGNEPLAQEVADRVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSNP 69

HSP 2 Score: 46.595 bits (109), Expect = 6.720e-22
Identity = 25/37 (67.57%), Postives = 27/37 (72.97%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            S PV  H  LMELLIMIDAC+RASA NI  V+P  GY
Sbjct:   67 SNPVNLH--LMELLIMIDACKRASAANINIVVPYYGY 101
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_STAAW (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=prs PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.137e-21
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 2 
Query:  443 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N   N+ +K+FS   N AL+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P
Sbjct:    4 NEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYP 69

HSP 2 Score: 43.8986 bits (102), Expect = 1.137e-21
Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            S PV  H  LMELLIMIDAC+RASA  I  V+P  GY
Sbjct:   67 SYPVNLH--LMELLIMIDACKRASAATINIVVPYYGY 101
The following BLAST results are available for this feature:
BLAST of FC931728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
KPRS_ANASP2.622e-2864.06Ribose-phosphate pyrophosphokinase OS=Anabaena sp.... [more]
KPRS_SYNE75.785e-2866.13Ribose-phosphate pyrophosphokinase OS=Synechococcu... [more]
KPRS_PROMP2.163e-2751.25Ribose-phosphate pyrophosphokinase OS=Prochlorococ... [more]
KPRS_GLOVI3.933e-2653.16Ribose-phosphate pyrophosphokinase OS=Gloeobacter ... [more]
KPRS_PROMA1.129e-2553.33Ribose-phosphate pyrophosphokinase OS=Prochlorococ... [more]
KPRS_STAS11.065e-2250.00Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAES3.970e-2251.52Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAEQ3.970e-2251.52Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAHJ6.720e-2250.00Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAW1.137e-2151.52Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]

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Properties
Property NameValue
Genbank descriptionC34108C11EF PostHarvP1 Citrus clementina cDNA clone C34108C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931728 ID=FC931728; Name=FC931728; organism=Citrus clementina; type=EST; length=736bp
GGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGCAA
CCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAAGA
AAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCTGA
AACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTCAC
AATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTTTC
GGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCTCG
GGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGCAT
TGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGACG
CTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGAAC
TACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCTTT
CCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACATA
AAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTTAG
AGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCGGCATGAAAAT
CTCATGGAGCTTTTGATAATGATAGATGCGTGTCGGAGAGCGTCAGCCAA
GAATATCACAGCTGTGATTCCTTTACTTGGATATGC
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