FC931728

Overview
NameFC931728
Unique NameFC931728
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_VIBCH (Ribose-phosphate pyrophosphokinase OS=Vibrio cholerae GN=prs PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.328e-18
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +KLF+G A P L+Q IA  + + LG   + RF+DGE+ VQ+ E+VRG DV+++Q TC P
Sbjct:    4 MKLFAGNAIPELAQRIADRLYISLGDATVSRFSDGEVAVQINENVRGSDVFIIQSTCAP 62

HSP 2 Score: 47.3654 bits (111), Expect = 2.328e-18
Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++MIDA RRASA  ITAVIP  GY
Sbjct:   60 CAPT---NDNLMELVVMIDAMRRASAGRITAVIPYFGY 94
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_CORAM (Ribose-phosphate pyrophosphokinase OS=Corynebacterium ammoniagenes GN=prs PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.026e-18
Identity = 28/62 (45.16%), Postives = 48/62 (77.42%), Query Frame = 2 
Query:  455 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N+ +K+FS  +N  L+++IA ++GV LGK ++ RF+DGE+ + ++ES+RGCDV+++Q T  P
Sbjct:    7 NSNLKVFSLNSNKELAEQIAKHIGVGLGKCSVDRFSDGEVQINIEESIRGCDVFIIQSTSFP 68

HSP 2 Score: 43.8986 bits (102), Expect = 3.026e-18
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 3 
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            +E++MELLIMIDA +RASAK I  VIP  GY
Sbjct:   70 NEHIMELLIMIDALKRASAKTINIVIPYYGY 100
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_BACCR (Ribose-phosphate pyrophosphokinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=prs PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.026e-18
Identity = 28/62 (45.16%), Postives = 48/62 (77.42%), Query Frame = 2 
Query:  455 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N+ +K+FS  +N  L+++IA ++GV LGK ++ RF+DGE+ + ++ES+RGCDV+++Q T  P
Sbjct:    7 NSNLKVFSLNSNKELAEQIAKHIGVGLGKCSVDRFSDGEVQINIEESIRGCDVFIIQSTSFP 68

HSP 2 Score: 43.8986 bits (102), Expect = 3.026e-18
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 3 
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            +E++MELLIMIDA +RASAK I  VIP  GY
Sbjct:   70 NEHIMELLIMIDALKRASAKTINIVIPYYGY 100
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_BACAN (Ribose-phosphate pyrophosphokinase OS=Bacillus anthracis GN=prs PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.026e-18
Identity = 28/62 (45.16%), Postives = 48/62 (77.42%), Query Frame = 2 
Query:  455 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            N+ +K+FS  +N  L+++IA ++GV LGK ++ RF+DGE+ + ++ES+RGCDV+++Q T  P
Sbjct:    7 NSNLKVFSLNSNKELAEQIAKHIGVGLGKCSVDRFSDGEVQINIEESIRGCDVFIIQSTSFP 68

HSP 2 Score: 43.8986 bits (102), Expect = 3.026e-18
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 3 
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            +E++MELLIMIDA +RASAK I  VIP  GY
Sbjct:   70 NEHIMELLIMIDALKRASAKTINIVIPYYGY 100
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_HAEIN (Ribose-phosphate pyrophosphokinase OS=Haemophilus influenzae GN=prs PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.026e-18
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            IKLF+G A P L++ I+  + + LG   + RF+DGEI VQ+ E+VRG DV+++Q TC P
Sbjct:    4 IKLFAGNATPELAKRISERLYISLGDATVARFSDGEIQVQINENVRGADVFIIQSTCAP 62

HSP 2 Score: 46.9802 bits (110), Expect = 3.026e-18
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++M+DA RRASA  ITAVIP  GY
Sbjct:   60 CAPT---NDNLMELVVMVDALRRASAGRITAVIPYFGY 94
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_SHEON (Ribose-phosphate pyrophosphokinase OS=Shewanella oneidensis GN=prs PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 3.026e-18
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            IKLF+G A P+L+++IA  +  +LG   + RF+DGEI VQ+ E+VRG DV+++Q TC P
Sbjct:    4 IKLFAGNATPSLAKKIADRLFCKLGDAVVGRFSDGEISVQINENVRGADVFIIQSTCAP 62

HSP 2 Score: 47.3654 bits (111), Expect = 3.026e-18
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++M+DA RRASA  ITAVIP  GY
Sbjct:   60 CAPT---NDNLMELIVMVDALRRASAGRITAVIPYFGY 94
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_HAEDU (Ribose-phosphate pyrophosphokinase OS=Haemophilus ducreyi GN=prs PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 3.026e-18
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            IKLF+G A P L++ I+  + + LG   + RF+DGEI VQ+ E+VRG DV+++Q TC P
Sbjct:    4 IKLFAGNATPELAKRISERLYISLGNATVGRFSDGEIQVQINENVRGSDVFIIQSTCAP 62

HSP 2 Score: 47.3654 bits (111), Expect = 3.026e-18
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++M+DA RRASA  ITAVIP  GY
Sbjct:   60 CAPT---NDNLMELIVMVDALRRASAGRITAVIPYFGY 94
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_XANCP (Ribose-phosphate pyrophosphokinase OS=Xanthomonas campestris pv. campestris GN=prs PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.933e-18
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 2 
Query:  470 LFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPA 643
            +FSG AN  L+Q I   +GV +GK  + RF+DGE+ V+++ESVR  +V+++QPTC P+
Sbjct:    9 VFSGNANKPLAQSICKELGVRMGKALVTRFSDGEVQVEIEESVRRQEVFVIQPTCAPS 66

HSP 2 Score: 47.3654 bits (111), Expect = 3.933e-18
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P     ENLMELL++IDA +RASA ++TAVIP  GY
Sbjct:   63 CAPSA---ENLMELLVLIDALKRASAASVTAVIPYFGY 97
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_RHOBA (Ribose-phosphate pyrophosphokinase OS=Rhodopirellula baltica GN=prs PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.934e-18
Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +K+FSG AN  L++++  ++ ++  +I + +F DGE Y +L E VRG DV+LVQPTCPP
Sbjct:    4 LKIFSGRANHDLAEKLCRHLHLKPARITLGQFPDGENYCKLDEDVRGRDVFLVQPTCPP 62

HSP 2 Score: 48.9062 bits (115), Expect = 3.934e-18
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 3 
Query:  627 PPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            PPV  ++NL+ELL MID C+RASA+ ITAVIP  GY
Sbjct:   61 PPV--NDNLIELLTMIDCCKRASAERITAVIPYFGY 94
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_BUCAI (Ribose-phosphate pyrophosphokinase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=prs PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 6.652e-18
Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +KLFSG + P L++ IA  + + LGK ++ RF+DGEI VQ+ E+VRG DV+++Q TC P
Sbjct:    4 MKLFSGNSIPKLAKFIANRLYINLGKASVGRFSDGEISVQINENVRGSDVFIIQSTCSP 62

HSP 2 Score: 46.2098 bits (108), Expect = 6.652e-18
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            CSP    ++N+MEL++M+D+ RRASA  ITAVIP  GY
Sbjct:   60 CSPT---NDNIMELVVMVDSLRRASAGRITAVIPYFGY 94
The following BLAST results are available for this feature:
BLAST of FC931728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
KPRS_VIBCH2.328e-1849.15Ribose-phosphate pyrophosphokinase OS=Vibrio chole... [more]
KPRS_CORAM3.026e-1845.16Ribose-phosphate pyrophosphokinase OS=Corynebacter... [more]
KPRS_BACCR3.026e-1845.16Ribose-phosphate pyrophosphokinase OS=Bacillus cer... [more]
KPRS_BACAN3.026e-1845.16Ribose-phosphate pyrophosphokinase OS=Bacillus ant... [more]
KPRS_HAEIN3.026e-1849.15Ribose-phosphate pyrophosphokinase OS=Haemophilus ... [more]
KPRS_SHEON3.026e-1850.85Ribose-phosphate pyrophosphokinase OS=Shewanella o... [more]
KPRS_HAEDU3.026e-1849.15Ribose-phosphate pyrophosphokinase OS=Haemophilus ... [more]
KPRS_XANCP3.933e-1848.28Ribose-phosphate pyrophosphokinase OS=Xanthomonas ... [more]
KPRS_RHOBA3.934e-1847.46Ribose-phosphate pyrophosphokinase OS=Rhodopirellu... [more]
KPRS_BUCAI6.652e-1850.85Ribose-phosphate pyrophosphokinase OS=Buchnera aph... [more]

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Properties
Property NameValue
Genbank descriptionC34108C11EF PostHarvP1 Citrus clementina cDNA clone C34108C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931728 ID=FC931728; Name=FC931728; organism=Citrus clementina; type=EST; length=736bp
GGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGCAA
CCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAAGA
AAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCTGA
AACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTCAC
AATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTTTC
GGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCTCG
GGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGCAT
TGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGACG
CTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGAAC
TACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCTTT
CCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACATA
AAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTTAG
AGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCGGCATGAAAAT
CTCATGGAGCTTTTGATAATGATAGATGCGTGTCGGAGAGCGTCAGCCAA
GAATATCACAGCTGTGATTCCTTTACTTGGATATGC
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