FC931728

Overview
NameFC931728
Unique NameFC931728
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_PHOLL (Ribose-phosphate pyrophosphokinase OS=Photorhabdus luminescens subsp. laumondii GN=prs PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.059e-17
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +KLF+G A P L+Q +A  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P
Sbjct:    4 MKLFAGNAIPELAQRVANRLYTNLGDAAVGRFSDGEVSVQVNENVRGGDIFIIQSTCAP 62

HSP 2 Score: 46.9802 bits (110), Expect = 7.059e-17
Identity = 23/38 (60.53%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++M+DA RRASA  ITAVIP  GY
Sbjct:   60 CAPT---NDNLMELVVMVDALRRASAGRITAVIPYFGY 94
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_PSESM (Ribose-phosphate pyrophosphokinase OS=Pseudomonas syringae pv. tomato GN=prs PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.060e-17
Identity = 24/61 (39.34%), Postives = 45/61 (73.77%), Query Frame = 2 
Query:  458 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +++ +F+G ANP L++ +   + + LG +++ +F+DGEI  ++ E+VRG DV+++QPTC P
Sbjct:    2 SKMMVFTGNANPDLARRVVRQLHIPLGDVSVGKFSDGEISTEINENVRGKDVFIIQPTCAP 62

HSP 2 Score: 44.669 bits (104), Expect = 7.060e-17
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++M DA RR+SA  ITAVIP  GY
Sbjct:   60 CAPT---NDNLMELVVMADAFRRSSASRITAVIPYFGY 94
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_PSEPK (Ribose-phosphate pyrophosphokinase OS=Pseudomonas putida (strain KT2440) GN=prs PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.060e-17
Identity = 24/61 (39.34%), Postives = 45/61 (73.77%), Query Frame = 2 
Query:  458 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +++ +F+G ANP L++ +   + + LG +++ +F+DGEI  ++ E+VRG DV+++QPTC P
Sbjct:    2 SKMMVFTGNANPDLARRVVRQLHIPLGDVSVGKFSDGEISTEINENVRGKDVFIIQPTCAP 62

HSP 2 Score: 44.669 bits (104), Expect = 7.060e-17
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++M DA RR+SA  ITAVIP  GY
Sbjct:   60 CAPT---NDNLMELVVMADAFRRSSASRITAVIPYFGY 94
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_CHRVO (Ribose-phosphate pyrophosphokinase OS=Chromobacterium violaceum GN=prs PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.549e-16
Identity = 26/59 (44.07%), Postives = 45/59 (76.27%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            + +F+GTANP L+Q +  ++ + LG+ ++ +F+DGE+ V+L E+VRG DV+++Q TC P
Sbjct:    7 LMVFTGTANPELAQNVVKHLDISLGRADVGKFSDGEVAVELLENVRGRDVFILQSTCAP 65

HSP 2 Score: 41.5874 bits (96), Expect = 1.549e-16
Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLME+L M DA +RASA  ITA IP  GY
Sbjct:   63 CAPT---NDNLMEILTMADALKRASAGRITAAIPYFGY 97
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_NEIMB (Ribose-phosphate pyrophosphokinase OS=Neisseria meningitidis serogroup B GN=prs PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.013e-16
Identity = 26/59 (44.07%), Postives = 44/59 (74.58%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            + +F+G ANP L+Q +  ++ + LG  ++ +F+DGE+ V+L E+VRG DV+++QPTC P
Sbjct:    7 LMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVAVELLENVRGRDVFILQPTCAP 65

HSP 2 Score: 40.0466 bits (92), Expect = 2.013e-16
Identity = 20/38 (52.63%), Postives = 25/38 (65.79%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLME+L M DA +RASA  IT  IP  GY
Sbjct:   63 CAPT---NDNLMEILTMADALKRASAGRITTAIPYFGY 97
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_NEIMA (Ribose-phosphate pyrophosphokinase OS=Neisseria meningitidis serogroup A GN=prs PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.013e-16
Identity = 26/59 (44.07%), Postives = 44/59 (74.58%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            + +F+G ANP L+Q +  ++ + LG  ++ +F+DGE+ V+L E+VRG DV+++QPTC P
Sbjct:    7 LMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVAVELLENVRGRDVFILQPTCAP 65

HSP 2 Score: 40.0466 bits (92), Expect = 2.013e-16
Identity = 20/38 (52.63%), Postives = 25/38 (65.79%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLME+L M DA +RASA  IT  IP  GY
Sbjct:   63 CAPT---NDNLMEILTMADALKRASAGRITTAIPYFGY 97
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS2_STRP6 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pyogenes serotype M6 GN=prs2 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.014e-16
Identity = 28/65 (43.08%), Postives = 48/65 (73.85%), Query Frame = 2 
Query:  446 RTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            R  + +IKLFS T+N  ++++IA   G+ LGK++ ++F+DGEI + ++E+VRG D+Y++Q T  P
Sbjct:    4 RYADKQIKLFSLTSNLPIAEKIAKAAGIPLGKMSSRQFSDGEIMINIEETVRGDDIYIIQSTSFP 68

HSP 2 Score: 44.2838 bits (103), Expect = 2.014e-16
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 3 
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            ++NL ELLIMIDAC+RASA  +  V+P  GY
Sbjct:   70 NDNLWELLIMIDACKRASANTVNIVLPYFGY 100
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_CLOTE (Ribose-phosphate pyrophosphokinase OS=Clostridium tetani GN=prs PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.015e-16
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +K+F+G +N  L+++IA  +GV LG   + RF+DGEI V + E+VRG D +++Q T  P
Sbjct:   10 LKIFAGNSNDKLAKDIADIVGVPLGSAEVGRFSDGEITVNINETVRGIDAFIIQSTSAP 68

HSP 2 Score: 46.595 bits (109), Expect = 2.015e-16
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 3 
Query:  624 SPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            S PV  ++NLMELLIMIDA +RASA  ITAVIP  GY
Sbjct:   66 SAPV--NDNLMELLIMIDAFKRASAGRITAVIPYYGY 100
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_BAUCH (Ribose-phosphate pyrophosphokinase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=prs PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.016e-16
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 2 
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +KLF+G A P L+Q IA  +   LG   + RF+DGEI VQ+ E+VRG D++++Q TC P
Sbjct:    1 MKLFAGNAIPELAQLIANRLYTSLGVAAVNRFSDGEISVQINENVRGGDLFIIQSTCAP 59

HSP 2 Score: 45.8246 bits (107), Expect = 2.016e-16
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 3 
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++M+DA RRASA  ITAV+P  GY
Sbjct:   57 CAPT---NDNLMELVVMVDALRRASAGRITAVMPYFGY 91
[Close]
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS2_STRP3 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pyogenes serotype M3 GN=prs2 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.618e-16
Identity = 28/65 (43.08%), Postives = 48/65 (73.85%), Query Frame = 2 
Query:  446 RTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            R  + +IKLFS T+N  ++++IA   G+ LGK++ ++F+DGEI + ++E+VRG D+Y++Q T  P
Sbjct:    4 RYADKQIKLFSLTSNLPIAEKIAKAAGIPLGKMSSRQFSDGEIMINIEETVRGDDIYIIQSTSFP 68

HSP 2 Score: 43.8986 bits (102), Expect = 2.618e-16
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 3 
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            ++NL ELLIMIDAC+RASA  +  V+P  GY
Sbjct:   70 NDNLWELLIMIDACQRASANTVNIVLPYFGY 100
The following BLAST results are available for this feature:
BLAST of FC931728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
KPRS_PHOLL7.059e-1745.76Ribose-phosphate pyrophosphokinase OS=Photorhabdus... [more]
KPRS_PSESM7.060e-1739.34Ribose-phosphate pyrophosphokinase OS=Pseudomonas ... [more]
KPRS_PSEPK7.060e-1739.34Ribose-phosphate pyrophosphokinase OS=Pseudomonas ... [more]
KPRS_CHRVO1.549e-1644.07Ribose-phosphate pyrophosphokinase OS=Chromobacter... [more]
KPRS_NEIMB2.013e-1644.07Ribose-phosphate pyrophosphokinase OS=Neisseria me... [more]
KPRS_NEIMA2.013e-1644.07Ribose-phosphate pyrophosphokinase OS=Neisseria me... [more]
KPRS2_STRP62.014e-1643.08Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS_CLOTE2.015e-1644.07Ribose-phosphate pyrophosphokinase OS=Clostridium ... [more]
KPRS_BAUCH2.016e-1649.15Ribose-phosphate pyrophosphokinase OS=Baumannia ci... [more]
KPRS2_STRP32.618e-1643.08Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]

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Properties
Property NameValue
Genbank descriptionC34108C11EF PostHarvP1 Citrus clementina cDNA clone C34108C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931728 ID=FC931728; Name=FC931728; organism=Citrus clementina; type=EST; length=736bp
GGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGCAA
CCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAAGA
AAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCTGA
AACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTCAC
AATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTTTC
GGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCTCG
GGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGCAT
TGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGACG
CTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGAAC
TACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCTTT
CCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACATA
AAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTTAG
AGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCGGCATGAAAAT
CTCATGGAGCTTTTGATAATGATAGATGCGTGTCGGAGAGCGTCAGCCAA
GAATATCACAGCTGTGATTCCTTTACTTGGATATGC
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