FC931728

Overview
NameFC931728
Unique NameFC931728
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS2_STRA5 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus agalactiae serotype V GN=prs2 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.618e-16
Identity = 27/62 (43.55%), Postives = 47/62 (75.81%), Query Frame = 2
Query:  455 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            + +IKLFS TAN  ++++I+   G+ LGK++ ++F+DGEI + ++E+VRG D+Y++Q T  P
Sbjct:    7 DKQIKLFSLTANREIAEKISQASGIPLGKMSSRQFSDGEIMINIEETVRGDDIYIIQSTSFP 68          

HSP 2 Score: 44.669 bits (104), Expect = 2.618e-16
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 3
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            ++NL ELLIMIDAC+RASA  +  V+P  GY
Sbjct:   70 NDNLWELLIMIDACKRASANTVNIVVPYFGY 100          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS2_STRA3 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus agalactiae serotype III GN=prs2 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.618e-16
Identity = 27/62 (43.55%), Postives = 47/62 (75.81%), Query Frame = 2
Query:  455 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            + +IKLFS TAN  ++++I+   G+ LGK++ ++F+DGEI + ++E+VRG D+Y++Q T  P
Sbjct:    7 DKQIKLFSLTANREIAEKISQASGIPLGKMSSRQFSDGEIMINIEETVRGDDIYIIQSTSFP 68          

HSP 2 Score: 44.669 bits (104), Expect = 2.618e-16
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 3
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            ++NL ELLIMIDAC+RASA  +  V+P  GY
Sbjct:   70 NDNLWELLIMIDACKRASANTVNIVVPYFGY 100          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_MARMS (Ribose-phosphate pyrophosphokinase OS=Marinomonas sp. (strain MWYL1) GN=prs PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.620e-16
Identity = 23/62 (37.10%), Postives = 44/62 (70.97%), Query Frame = 2
Query:  458 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPA 643
            +++ +F+G ANP L++ +   +G+ +G   + +F+D EI V++ E+VRG DV+++Q TC P+
Sbjct:    2 SKLMVFTGNANPELARRVVRRLGLPIGNATVGKFSDSEITVEINENVRGKDVFIIQSTCAPS 63          

HSP 2 Score: 45.8246 bits (107), Expect = 2.620e-16
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 3
Query:  621 CSPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            C+P    ++NLMEL++M DA RRASA  +TAVIP  GY
Sbjct:   60 CAPS---NDNLMELIVMADALRRASATRVTAVIPYFGY 94          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS_CHLTE (Ribose-phosphate pyrophosphokinase OS=Chlorobium tepidum GN=prs PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 5.750e-16
Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 2
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPA 643
            IK+ +G +NP L+++IA Y+G  L     + F+DGEI V   ES+RG D++++Q T PPA
Sbjct:    5 IKIVAGRSNPELAKKIAAYLGTPLCDAKAENFSDGEISVNYFESIRGSDMFIIQSTNPPA 64          

HSP 2 Score: 45.0542 bits (105), Expect = 5.750e-16
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  624 SPPVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            +PP    +NLMELLIMIDA +R+SA  ITAV+P  GY
Sbjct:   61 NPPA---DNLMELLIMIDAAKRSSAYRITAVLPYYGY 94          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS2_STRP1 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pyogenes serotype M1 GN=prs2 PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 7.471e-16
Identity = 27/65 (41.54%), Postives = 48/65 (73.85%), Query Frame = 2
Query:  446 RTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            R  + +IKLFS T+N  ++++IA   G+ LGK++ ++F++GEI + ++E+VRG D+Y++Q T  P
Sbjct:    4 RYADKQIKLFSLTSNLPIAEKIAKAAGIPLGKMSSRQFSNGEIMINIEETVRGDDIYIIQSTSFP 68          

HSP 2 Score: 44.2838 bits (103), Expect = 7.471e-16
Identity = 19/31 (61.29%), Postives = 24/31 (77.42%), Query Frame = 3
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            ++NL ELLIMIDAC+RASA  +  V+P  GY
Sbjct:   70 NDNLWELLIMIDACKRASANTVNIVLPYFGY 100          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS2_STRR6 (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=prs2 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.475e-16
Identity = 29/59 (49.15%), Postives = 45/59 (76.27%), Query Frame = 2
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +KLF+  +N  ++Q+IA  +GV LGK++ ++F+DGEI V ++ESVRG DVY++Q T  P
Sbjct:    7 MKLFALNSNQEIAQKIAQAVGVPLGKLSSRQFSDGEIQVNIEESVRGYDVYIIQSTSFP 65          

HSP 2 Score: 42.743 bits (99), Expect = 7.475e-16
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  630 PVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            PV  H  LMELLIM+DAC RASA +I  V+P  GY
Sbjct:   65 PVNNH--LMELLIMVDACVRASAHSINVVLPYFGY 97          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: KPRS2_STRPN (Ribose-phosphate pyrophosphokinase 2 OS=Streptococcus pneumoniae GN=prs2 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.475e-16
Identity = 29/59 (49.15%), Postives = 45/59 (76.27%), Query Frame = 2
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPP 640
            +KLF+  +N  ++Q+IA  +GV LGK++ ++F+DGEI V ++ESVRG DVY++Q T  P
Sbjct:    7 MKLFALNSNQEIAQKIAQAVGVPLGKLSSRQFSDGEIQVNIEESVRGYDVYIIQSTSFP 65          

HSP 2 Score: 42.743 bits (99), Expect = 7.475e-16
Identity = 22/35 (62.86%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  630 PVLRHENLMELLIMIDACRRASAKNITAVIPLLGY 734
            PV  H  LMELLIM+DAC RASA +I  V+P  GY
Sbjct:   65 PVNNH--LMELLIMVDACVRASAHSINVVLPYFGY 97          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: PRPS1_RAT (Ribose-phosphate pyrophosphokinase 1 OS=Rattus norvegicus GN=Prps1 PE=1 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 9.716e-16
Identity = 30/57 (52.63%), Postives = 44/57 (77.19%), Query Frame = 2
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTC 634
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60          

HSP 2 Score: 43.1282 bits (100), Expect = 9.716e-16
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 3
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            ++NLMELLIMI+AC+ ASA  +TAVIP   Y
Sbjct:   64 NDNLMELLIMINACKIASASRVTAVIPCFPY 94          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: PRPS1_PONAB (Ribose-phosphate pyrophosphokinase 1 OS=Pongo abelii GN=PRPS1 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 9.716e-16
Identity = 30/57 (52.63%), Postives = 44/57 (77.19%), Query Frame = 2
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTC 634
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60          

HSP 2 Score: 43.1282 bits (100), Expect = 9.716e-16
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 3
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            ++NLMELLIMI+AC+ ASA  +TAVIP   Y
Sbjct:   64 NDNLMELLIMINACKIASASRVTAVIPCFPY 94          
BLAST of FC931728 vs. ExPASy Swiss-Prot
Match: PRPS1_MOUSE (Ribose-phosphate pyrophosphokinase 1 OS=Mus musculus GN=Prps1 PE=1 SV=3)

HSP 1 Score: 61.2326 bits (147), Expect = 9.716e-16
Identity = 30/57 (52.63%), Postives = 44/57 (77.19%), Query Frame = 2
Query:  464 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTC 634
            IK+FSG+++  LSQ+IA  +G+ELGK+  K+F++ E  V++ ESVRG DVY+VQ  C
Sbjct:    4 IKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC 60          

HSP 2 Score: 43.1282 bits (100), Expect = 9.716e-16
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 3
Query:  642 HENLMELLIMIDACRRASAKNITAVIPLLGY 734
            ++NLMELLIMI+AC+ ASA  +TAVIP   Y
Sbjct:   64 NDNLMELLIMINACKIASASRVTAVIPCFPY 94          
The following BLAST results are available for this feature:
BLAST of FC931728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
KPRS2_STRA52.618e-1643.55Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_STRA32.618e-1643.55Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS_MARMS2.620e-1637.10Ribose-phosphate pyrophosphokinase OS=Marinomonas ... [more]
KPRS_CHLTE5.750e-1645.00Ribose-phosphate pyrophosphokinase OS=Chlorobium t... [more]
KPRS2_STRP17.471e-1641.54Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_STRR67.475e-1649.15Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
KPRS2_STRPN7.475e-1649.15Ribose-phosphate pyrophosphokinase 2 OS=Streptococ... [more]
PRPS1_RAT9.716e-1652.63Ribose-phosphate pyrophosphokinase 1 OS=Rattus nor... [more]
PRPS1_PONAB9.716e-1652.63Ribose-phosphate pyrophosphokinase 1 OS=Pongo abel... [more]
PRPS1_MOUSE9.716e-1652.63Ribose-phosphate pyrophosphokinase 1 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionC34108C11EF PostHarvP1 Citrus clementina cDNA clone C34108C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931728 ID=FC931728; Name=FC931728; organism=Citrus clementina; type=EST; length=736bp
GGAAAATCCAAAGCGACGAAGCAAAATAGCCAAAGAAGAAGAAAAAGCAA
CCGAAGCTCTCTCTGCCTCCTCACCGTCACCACAAAAACAAAAGGAAAGA
AAGAAAGAGAGTGAGTGAGAGAAAGAGAGATCAAAAGGAGAGAGAGCTGA
AACAACACAACAGATAACAATGGCTTCGCTGACGATGCCGCGCCCTTCAC
AATCCACGTCAGCTTCTTGCTCTTCGCCTATCCCCAGTCGCTGTTCTTTC
GGTGACCAAAACCCAACTTTTTCATTCAGTTTCAGGGACTCTCGCTCTCG
GGTTCACGTCTGTAATGCCGCCGCCGTTAGATGTGACATGGCTGAGGCAT
TGAATTTTCCAAATGGGAAGCCTAATATTCCAGTTCTAAACGAACGGACG
CTGCCCAAATTTTTGGAAACGGCGCGTATGGAGAAAACTGTCAACAGAAC
TACAAATAACAGGATCAAATTGTTCTCTGGCACCGCCAATCCTGCTCTTT
CCCAGGAAATTGCTTGCTACATGGGCGTGGAACTGGGAAAGATCAACATA
AAGCGATTTGCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTTAG
AGGATGTGATGTTTATTTGGTGCAGCCCACCTGTCCTCCGGCATGAAAAT
CTCATGGAGCTTTTGATAATGATAGATGCGTGTCGGAGAGCGTCAGCCAA
GAATATCACAGCTGTGATTCCTTTACTTGGATATGC
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