FC931729
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: RF1_AERPE (Peptide chain release factor subunit 1 OS=Aeropyrum pernix GN=prf1 PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 49/146 (33.56%), Postives = 75/146 (51.37%), Query Frame = 2 Query: 221 TSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLP 658 T ++SL +PP +S V +L E+ NIK + RQ+V A+++A RL++ PPNGLVL+ G D K F P PI Y D +F TD L +++E ++ G I+++ + G L G EVL + +P Sbjct: 32 TVLLSLYIPPGRPLSDVMTLLRQEYSITDNIKLKRTRQAVKRALSAAMDRLQMLTSTPPNGLVLFCG---EDMSTGKFECFMFSPPEPIRVFYYRTDKRFITDFLEDMVEDNNAIGIIIVERDQATIGLLKGARLEVLKELEGFVP 174
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: RF1_SULSO (Peptide chain release factor subunit 1 OS=Sulfolobus solfataricus GN=prf1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.338e-14 Identity = 46/147 (31.29%), Postives = 72/147 (48.98%), Query Frame = 2 Query: 221 TSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTG-TIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLP 658 T ++SL +PP + V +L E+ A NIK + R +VL AI +A RL K+ NGLVL+ G T+D K F P + Y D +FH + L +++E +G I+++ + G L G E+L + +P Sbjct: 28 TVLLSLYIPPGRPIPDVVNLLRQEYSIAQNIKLKRTRDAVLSAIGAAIDRLNKIPKIDGNGLVLFCGENFDTEDFK----CFMFSPPDKVPLFFYRTDKEFHLEFLEDMVEDTAVYGLIIVERDEATIGLLKGARIEILEEIEGFVP 170 HSP 2 Score: 28.4906 bits (62), Expect = 1.338e-14 Identity = 12/34 (35.29%), Postives = 20/34 (58.82%), Query Frame = 1 Query: 661 KHGRGGQSALRFARLRMEKRHNYVRKTAELAHSF 762 KH GGQS R R+ E HN++++ E +++ Sbjct: 172 KHMMGGQSQRRIDRIIDEMYHNFLKEVGEKVNAY 205
BLAST of FC931729 vs. ExPASy Swiss-Prot
Match: RF1_PYRAE (Peptide chain release factor subunit 1 OS=Pyrobaculum aerophilum GN=prf1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13 Identity = 42/150 (28.00%), Postives = 71/150 (47.33%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLP 658 +G T++I+L + + V +L E+ TA+NIK + R V + LK K P NG+ ++ G + + G + V P +PIN Y+CD FHT+ L + L + +G +V++ + L G EV+ +P Sbjct: 30 KGYATTLITLYINAERPIPDVVNLLRSEWSTAANIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAVFAGFHMINQGNYEWVYYVVIPPQPINTFKYICDTAFHTELLEDQLHAGVVYGIVVIERGEAVIALLKGGQWEVVKSVEFFVP 179 The following BLAST results are available for this feature:
BLAST of FC931729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931729 ID=FC931729; Name=FC931729; organism=Citrus clementina; type=EST; length=771bpback to top |