FC931733

Overview
NameFC931733
Unique NameFC931733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11279 contig Ccv1_Contig11279:876..1547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMM (Chaperone protein dnaK2 OS=Prochlorococcus marinus (strain MIT 9313) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.473e-94
Identity = 171/223 (76.68%), Postives = 201/223 (90.13%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDK IVD LA+ FK +EGIDL +DKQALQRLTE AE+AK+ELSS TQ+ I+LPFITAT++GPKH+D TLTR KFEEL S L+DR + PVE +L+DAKLS  +LDE+++VGGS+R+PAVQELVK++TG++ N TVNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKVIVDHLAATFKANEGIDLRQDKQALQRLTEAAEKAKIELSSATQSEINLPFITATSEGPKHLDLTLTRAKFEELASKLIDRCRVPVEQALKDAKLSSGELDEIVMVGGSSRMPAVQELVKRVTGKDPNQTVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_PORUM (Chaperone protein dnaK OS=Porphyra umbilicalis GN=dnaK PE=3 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 1.924e-94
Identity = 165/223 (73.99%), Postives = 199/223 (89.24%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTFDVS+LEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL  +FK+ EGIDL KD+QALQRLTE +E+AK+ELS+LTQT I+LPFITAT DGPKH++ T+TR KFEELCS L+D+   PV  +L+DAKL    +DEV+LVGGSTRIPA+Q++VK++ G++ N +VNP
Sbjct:  138 ITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDQQIVEWLIKDFKQSEGIDLGKDRQALQRLTEASEKAKIELSNLTQTEINLPFITATQDGPKHLEKTVTRAKFEELCSRLIDKCSIPVNNALKDAKLEASSIDEVVLVGGSTRIPAIQQMVKRLIGKDPNQSVNP 360
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_PORPU (Chaperone protein dnaK OS=Porphyra purpurea GN=dnaK PE=3 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 1.924e-94
Identity = 165/223 (73.99%), Postives = 199/223 (89.24%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +K+NNETILVFDLGGGTFDVS+LEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL  +FK+ EGIDL KD+QALQRLTE +E+AK+ELS+LTQT I+LPFITAT DGPKH++ T+TR KFEELCS L+D+   PV  +L+DAKL    +DEV+LVGGSTRIPA+Q++VK++ G++ N +VNP
Sbjct:  138 ITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAASLSYGLDKQNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDQQIVEWLIKDFKQSEGIDLGKDRQALQRLTEASEKAKIELSNLTQTEINLPFITATQDGPKHLEKTVTRAKFEELCSRLIDKCSIPVNNALKDAKLEASSIDEVVLVGGSTRIPAIQQMVKRLIGKDPNQSVNP 360
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMA (Chaperone protein dnaK2 OS=Prochlorococcus marinus GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 9.548e-94
Identity = 168/223 (75.34%), Postives = 201/223 (90.13%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG ++K+NE ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDK IVD LA+ FK +EGIDL +DKQALQRLTE AE+AK+ELS+ TQ+ I+LPFITAT +GPKH+D TLTR KFEEL S+L+DR + PVE +L+DAKLS  ++DE+++VGGSTR+PAV+ELVK++TG++ N TVNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDRKSNERILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKVIVDHLAATFKANEGIDLRQDKQALQRLTEAAEKAKIELSNATQSEINLPFITATPEGPKHVDLTLTRAKFEELASNLIDRCRVPVEQALKDAKLSTGEIDEIVMVGGSTRMPAVKELVKRVTGKDPNQTVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_GLOVI (Chaperone protein dnaK OS=Gloeobacter violaceus GN=dnaK PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.629e-93
Identity = 169/223 (75.78%), Postives = 199/223 (89.24%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAGRIAG++VLRIINEPTAA+LAYG +KK NETILVFDLGGGTFDVS+LEVGDGVFEV STSGDTHLGGDDFD+RIVD+LA  FK+ EG+DL  D+QALQRLTE AE+AK+ELS +TQT I+LPFITA ADG KH+D +LTR KFE LC+DLL R++ PVE +LRDAKLS +++DEV+LVGGSTRIPAVQELVK++ G++ N +VNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGRIAGIEVLRIINEPTAAALAYGLDKKANETILVFDLGGGTFDVSILEVGDGVFEVKSTSGDTHLGGDDFDRRIVDYLADEFKKLEGVDLRTDRQALQRLTEAAEKAKIELSGVTQTQINLPFITAGADGAKHLDMSLTRAKFESLCADLLRRVEKPVEQALRDAKLSKENIDEVVLVGGSTRIPAVQELVKRIIGKDPNQSVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_GRATL (Chaperone protein dnaK OS=Gracilaria tenuistipitata var. liui GN=dnaK PE=3 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.127e-93
Identity = 165/223 (73.99%), Postives = 197/223 (88.34%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGLDVLRIINEPTAASL+YG +KKNNETILVFDLGGGTFDVS+LEVGDGVFEVLSTSGDTHLGGDDFD++IV+WL   F  DEGI+L KD+QALQRLTE AE+AKMELSSL QT+I+LPFIT+T  GPKH++  +TR KFE LC DL++R + PV  +L+DA+LS  ++DE++LVGGSTRIPA+Q+LVKKM G++ N +VNP
Sbjct:  140 ITVPAYFNDSQRQATKDAGQIAGLDVLRIINEPTAASLSYGLDKKNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDRKIVEWLIHEFSHDEGINLGKDRQALQRLTEAAEKAKMELSSLAQTDINLPFITSTDTGPKHLEKNITRAKFEYLCQDLINRCEIPVNNALKDAQLSSGNIDEIVLVGGSTRIPAIQQLVKKMIGKDPNQSVNP 362
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNPX (Chaperone protein dnaK2 OS=Synechococcus sp. (strain WH8102) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.778e-93
Identity = 170/223 (76.23%), Postives = 197/223 (88.34%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDK IVD LA  FK +EGIDL +DKQALQRLTE AE+AK+ELSS TQ+ I+LPFITAT +GPKH+D TLTR KFEEL ++L+DR + PVE +L+DAKLS  +LDE+++VGGSTRIPAV ELVK+ T ++ N TVNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKVIVDHLAETFKSNEGIDLRQDKQALQRLTEAAEKAKIELSSATQSEINLPFITATPEGPKHLDLTLTRAKFEELAANLIDRCRIPVEQALKDAKLSSSELDEIVMVGGSTRIPAVLELVKRTTSKDPNQTVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_PROMP (Chaperone protein dnaK2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.056e-92
Identity = 168/223 (75.34%), Postives = 198/223 (88.79%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD+ IVD LAS FK +EGIDL +DKQALQRLTE AE+AK+ELS+ TQ+ I+LPFITAT +GPKH+D  LTR  FEEL S L+DR + PVE +L+DAKLS  ++DE+++VGGSTR+PAVQELVK++TG++ N TVNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDRCIVDHLASIFKSNEGIDLRQDKQALQRLTEAAEKAKIELSNATQSEINLPFITATPEGPKHLDLNLTRANFEELASKLIDRCRVPVEQALKDAKLSTGEIDEIVMVGGSTRMPAVQELVKRVTGKDPNQTVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_PROMT (Chaperone protein dnaK OS=Prochlorococcus marinus (strain NATL2A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.379e-92
Identity = 168/223 (75.34%), Postives = 200/223 (89.69%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD+ IVD LAS FK +EGIDL +DKQALQRLTE AE+AK+ELS+ TQ+ I+LPFITAT +GPKH+D TLTR KFEEL S+L+DR + PVE +L+DAKLS  ++DE+++VGGSTR+PAV+ELVK++T ++ N TVNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDRVIVDHLASTFKGNEGIDLRQDKQALQRLTEAAEKAKIELSNATQSEINLPFITATPEGPKHLDLTLTRGKFEELASNLIDRCRVPVEQALKDAKLSTGEIDEIVMVGGSTRMPAVKELVKRVTTKDPNQTVNP 361
[Close]
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_PROM5 (Chaperone protein dnaK OS=Prochlorococcus marinus (strain MIT 9515) GN=dnaK PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.379e-92
Identity = 168/223 (75.34%), Postives = 198/223 (88.79%), Query Frame = 2 
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK+NE ILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFD+ IV+ LAS FK +EGIDL +DKQALQRLTE AE+AK+ELS+ TQ+ I+LPFITAT DGPKH+D  LTR  FEEL S L+DR + PVE +L+DAKLS  ++DE+++VGGSTR+PAVQELVK++TG++ N TVNP
Sbjct:  139 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKSNERILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDRCIVNHLASVFKSNEGIDLREDKQALQRLTEAAEKAKIELSNATQSEINLPFITATPDGPKHLDLNLTRANFEELASKLIDRCRVPVEQALKDAKLSTGEIDEIVMVGGSTRMPAVQELVKRVTGKDPNQTVNP 361
The following BLAST results are available for this feature:
BLAST of FC931733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK2_PROMM1.473e-9476.68Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_PORUM1.924e-9473.99Chaperone protein dnaK OS=Porphyra umbilicalis GN=... [more]
DNAK_PORPU1.924e-9473.99Chaperone protein dnaK OS=Porphyra purpurea GN=dna... [more]
DNAK2_PROMA9.548e-9475.34Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_GLOVI1.629e-9375.78Chaperone protein dnaK OS=Gloeobacter violaceus GN... [more]
DNAK_GRATL2.127e-9373.99Chaperone protein dnaK OS=Gracilaria tenuistipitat... [more]
DNAK2_SYNPX2.778e-9376.23Chaperone protein dnaK2 OS=Synechococcus sp. (stra... [more]
DNAK2_PROMP1.056e-9275.34Chaperone protein dnaK2 OS=Prochlorococcus marinus... [more]
DNAK_PROMT1.379e-9275.34Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]
DNAK_PROM51.379e-9275.34Chaperone protein dnaK OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionC34108D05EF PostHarvP1 Citrus clementina cDNA clone C34108D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931733 ID=FC931733; Name=FC931733; organism=Citrus clementina; type=EST; length=672bp
GGTCACAGTGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGG
ATGCTGGTCGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCT
ACTGCTGCTTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCAT
CCTAGTGTTTGACCTTGGTGGTGGTACTTTTGATGTTTCAGTCCTTGAGG
TCGGTGATGGAGTGTTTGAAGTGCTCTCCACCTCAGGCGATACGCATTTG
GGTGGTGATGATTTTGATAAGAGGATTGTTGATTGGCTTGCTTCAAACTT
CAAGAGAGATGAAGGCATAGATCTTTTGAAGGACAAACAAGCTCTTCAGC
GTCTAACTGAGACGGCTGAGGAGGCTAAGATGGAGCTGTCATCTTTGACT
CAAACAAACATCAGCTTGCCTTTCATTACTGCTACTGCAGATGGGCCGAA
GCATATTGACACCACCCTTACGAGGGTTAAGTTTGAGGAATTGTGTTCAG
ACCTACTGGACAGGCTCAAGACGCCTGTTGAAACTTCTTTGCGGGATGCA
AAACTTTCCTTCAAGGATCTTGATGAGGTTATTCTTGTTGGTGGATCAAC
ACGTATTCCAGCTGTTCAGGAGCTGGTGAAGAAGATGACTGGAAGGGAAA
CCAATGTTACAGTCAATCCTGA
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