FC931733

Overview
NameFC931733
Unique NameFC931733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11279 contig Ccv1_Contig11279:876..1547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK3_SYNE7 (Chaperone protein dnaK3 OS=Synechococcus elongatus (strain PCC 7942) GN=dnaK3 PE=3 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 4.749e-85
Identity = 152/223 (68.16%), Postives = 190/223 (85.20%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR AT+DAGRIAGL+V RI+NEPTAASLAYG ++++N+TILVFDLGGGTFDVSVL+VG+GVFEV +TSGDT LGG+DFD+RIVDWLA  F   EGIDL +D+QALQRL E AE+AK+ELS ++ T+I+LPFITAT D PKH++T LTR +FE LC DLL+R+  P+  +L+DA+L  +D+DEV+LVGGSTR+P VQ+LV+ + GRE N  VNP
Sbjct:  140 ITVPAYFNDSQRQATRDAGRIAGLEVKRILNEPTAASLAYGLDRRDNQTILVFDLGGGTFDVSVLKVGNGVFEVKATSGDTQLGGNDFDRRIVDWLAEQFLEAEGIDLRRDRQALQRLIEAAEKAKIELSGVSVTDINLPFITATEDEPKHLETRLTRSEFEALCEDLLERMMRPLRRALKDARLQPQDIDEVVLVGGSTRMPMVQQLVRSLIGREPNQNVNP 362          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK2_STRAW (Chaperone protein dnaK2 OS=Streptomyces avermitilis GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 4.749e-85
Identity = 154/224 (68.75%), Postives = 193/224 (86.16%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMT-GRETNVTVNP 670
            +TVPAYFND+QRTATKDAGRIAGL+VLRIINEPTAA+LAYG +KK +ET+LVFDLGGGTFDVS+L+VGDGV EV ST+GD+HLGGDDFD+R+VD+LA +F+++ GIDL KD QALQRL E AE+AK ELSS+TQT +SLPFITA A GPKH+  T+ R  FE++ SDL++R   PV+ ++ DAK+   D+DEVILVGGSTRIPAVQ LV+++T G++ N++VNP
Sbjct:  138 ITVPAYFNDAQRTATKDAGRIAGLEVLRIINEPTAAALAYGMDKKEHETVLVFDLGGGTFDVSILDVGDGVVEVRSTAGDSHLGGDDFDRRLVDYLADDFQQENGIDLRKDPQALQRLFEAAEKAKTELSSVTQTQVSLPFITADASGPKHLTDTVMRSTFEQITSDLVERCLGPVQQAMADAKVGESDIDEVILVGGSTRIPAVQALVRRLTGGKDPNMSVNP 361          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_DESOH (Chaperone protein dnaK OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 6.203e-85
Identity = 155/223 (69.51%), Postives = 188/223 (84.30%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYF+DSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +KK +E I VFDLGGGTFD+SVLE+GDGVFEV ST+GDTHLGG+DFD R+VD+LAS FK+D+GIDL +DK ALQRL E AE+AKMELSS  QT+I+LPFITA A+GPKH++  L+R K EEL  DLLD++  P ET+L+D+  S   +DEVILVGG TR+PAVQ+ VKK+ G+  N +VNP
Sbjct:  140 ITVPAYFSDSQRQATKDAGKIAGLNVLRIINEPTAASLAYGLDKKKDEKIAVFDLGGGTFDISVLEIGDGVFEVKSTNGDTHLGGEDFDLRVVDYLASEFKKDQGIDLRQDKMALQRLKEAAEKAKMELSSSPQTDINLPFITADANGPKHLNIKLSRAKLEELVEDLLDKMAKPCETALKDSGFSASQIDEVILVGGMTRMPAVQDRVKKIFGKAPNKSVNP 362          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK5 (Chaperone protein dnaK OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaK PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.357e-84
Identity = 156/224 (69.64%), Postives = 186/224 (83.04%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +K + N+ I V+DLGGGTFDVS+LE+GDGVFEV +T+GDTHLGGDDFDK+I+D++A  FK D GIDL  DK ALQRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID +LTR KF EL  DL+DR   P++ +L DA L+  D+++VILVGGSTRIPAVQE VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGMDKMDTNQKIFVYDLGGGTFDVSILELGDGVFEVKATNGDTHLGGDDFDKKIIDYIADTFKADNGIDLKNDKMALQRLKEAAEKAKIELSSSTQTNINLPFITADATGPKHIDMSLTRAKFNELTQDLVDRTIEPMKKALNDAGLTINDINKVILVGGSTRIPAVQEAVKSFTGKEPSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK1 (Chaperone protein dnaK OS=Clostridium kluyveri (strain NBRC 12016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.357e-84
Identity = 156/224 (69.64%), Postives = 186/224 (83.04%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +K + N+ I V+DLGGGTFDVS+LE+GDGVFEV +T+GDTHLGGDDFDK+I+D++A  FK D GIDL  DK ALQRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID +LTR KF EL  DL+DR   P++ +L DA L+  D+++VILVGGSTRIPAVQE VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAAALAYGMDKMDTNQKIFVYDLGGGTFDVSILELGDGVFEVKATNGDTHLGGDDFDKKIIDYIADTFKADNGIDLKNDKMALQRLKEAAEKAKIELSSSTQTNINLPFITADATGPKHIDMSLTRAKFNELTQDLVDRTIEPMKKALNDAGLTINDINKVILVGGSTRIPAVQEAVKSFTGKEPSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_ODOSI (Chaperone protein dnaK OS=Odontella sinensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.251e-84
Identity = 152/223 (68.16%), Postives = 185/223 (82.96%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR AT DAG+IAG++VLRIINEPTAASLAYG +KK NETILVFDLGGGTFDVS+LEVGDG+FEVL+T+GDT+LGGDDFDK +V WL   F+  EGIDL +D QALQRLTE AE+AKMELS++ +T I LPFITA   GPKHI+  LTR  FE LC +L++R + PVE +L DA+L   D++EV+LVGGSTRIPA+Q LV+ +T ++ N +VNP
Sbjct:  140 ITVPAYFNDSQRQATMDAGKIAGVEVLRIINEPTAASLAYGLDKKQNETILVFDLGGGTFDVSILEVGDGIFEVLATAGDTNLGGDDFDKVLVRWLVKEFEDQEGIDLTQDIQALQRLTEAAEKAKMELSTVEKTTIHLPFITADKTGPKHIEKELTRKTFETLCQELIERCQIPVEKALTDARLEKSDINEVVLVGGSTRIPAIQNLVESLTNKKPNQSVNP 362          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_ANAVT (Chaperone protein dnaK OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dnaK PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 6.858e-84
Identity = 151/223 (67.71%), Postives = 190/223 (85.20%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR AT+DAGRIAGL+VLRI+NEPTAASLAYG ++ + ETILVFDLGGGTFDVS+LEVGDGVFEV +TSGDT LGG+DFDK+IVDWLA  F   EG+DL +D+QALQRL E AE+AK+ELS+++ T+I+LPFITAT DGPKH++T LTR +FE LC+DLL R++ PV+ +L+DA L   D++EV+LVGGSTR+P V++LV+ + G E +  VNP
Sbjct:  140 ITVPAYFNDSQRQATRDAGRIAGLEVLRILNEPTAASLAYGLDRGDTETILVFDLGGGTFDVSILEVGDGVFEVKATSGDTQLGGNDFDKKIVDWLAEQFLETEGVDLRRDRQALQRLMEAAEKAKIELSAVSITDINLPFITATEDGPKHLETRLTRSQFEGLCADLLGRVRNPVKRALKDAGLRPDDIEEVVLVGGSTRMPMVKQLVRDLIGIEPSENVNP 362          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK3_THEEB (Chaperone protein dnaK3 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK3 PE=2 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.170e-83
Identity = 152/223 (68.16%), Postives = 187/223 (83.86%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR AT+DAGRIAGL+V RIINEPTAA+LAYG +++  +TILVFDLGGGTFDVS+LEVGDGVFEV +TSGDT LGG+DFDK IVDWLA +F   EGIDL +D+Q+LQRLT+ AE+AK+ELS L +TNI LPF+TATA+GPKHI+TTL+R +FE+L   LL RL+ PVE +L DA L+   +D V+LVGG+TR+P VQ+LV++M GRE    VNP
Sbjct:  147 ITVPAYFNDSQRQATRDAGRIAGLNVRRIINEPTAAALAYGLDRQQEQTILVFDLGGGTFDVSILEVGDGVFEVKATSGDTQLGGNDFDKLIVDWLAEDFLAKEGIDLRRDRQSLQRLTDAAEKAKIELSGLLETNIDLPFVTATAEGPKHIETTLSRRQFEDLSQGLLQRLRYPVEQALMDAHLTPSQIDAVVLVGGATRMPMVQDLVRQMIGREPKQNVNP 369          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_DESAA (Chaperone protein dnaK OS=Desulfatibacillum alkenivorans (strain AK-01) GN=dnaK PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.528e-83
Identity = 152/223 (68.16%), Postives = 186/223 (83.41%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +KK++E I VFDLGGGTFDVS+LE+G+GVFEV ST+GDTHLGG+DFD  ++D+LA  FK+D+GIDL  DK ALQRL E AE+AKMELS+  +T ++LPFITA A GPKH++  LTR K E L SDLLD+L+ P  T+L+DA +S  ++DEVILVGG TR+PAVQE VKK+ G+E +  VNP
Sbjct:  140 ITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAASLAYGLDKKSDEKIAVFDLGGGTFDVSILEIGEGVFEVKSTNGDTHLGGEDFDLLVIDYLADEFKKDQGIDLRSDKMALQRLKEAAEKAKMELSTSVETEVNLPFITADASGPKHLNVKLTRAKLESLVSDLLDKLEGPCVTALKDAGMSASEVDEVILVGGMTRMPAVQERVKKIFGKEPHKGVNP 362          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOTE (Chaperone protein dnaK OS=Clostridium tetani GN=dnaK PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.528e-83
Identity = 156/224 (69.64%), Postives = 187/224 (83.48%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAGRIAGL+VLRIINEPTAASLAYG +K + N+ ILV+DLGGGTFDVS+LE+GDGVFEV ST+G+T LGGDDFD+RI+D +A  FK+D GIDL  DK ALQRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL++   TP++ +L+DA++S  ++D+VILVGGSTRIPAVQ+ VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGRIAGLEVLRIINEPTAASLAYGLDKMDTNQKILVYDLGGGTFDVSILELGDGVFEVKSTNGNTKLGGDDFDQRIIDHIAETFKKDSGIDLRTDKMALQRLKEAAEKAKIELSSSTQTNINLPFITADATGPKHIDMNLTRAKFNELTQDLVEGTLTPMKKALQDAEMSIGEIDKVILVGGSTRIPAVQDAVKNFTGKEPSKDVNP 339          
The following BLAST results are available for this feature:
BLAST of FC931733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK3_SYNE74.749e-8568.16Chaperone protein dnaK3 OS=Synechococcus elongatus... [more]
DNAK2_STRAW4.749e-8568.75Chaperone protein dnaK2 OS=Streptomyces avermitili... [more]
DNAK_DESOH6.203e-8569.51Chaperone protein dnaK OS=Desulfococcus oleovorans... [more]
DNAK_CLOK52.357e-8469.64Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_CLOK12.357e-8469.64Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_ODOSI5.251e-8468.16Chaperone protein dnaK OS=Odontella sinensis GN=dn... [more]
DNAK_ANAVT6.858e-8467.71Chaperone protein dnaK OS=Anabaena variabilis (str... [more]
DNAK3_THEEB1.170e-8368.16Chaperone protein dnaK3 OS=Thermosynechococcus elo... [more]
DNAK_DESAA1.528e-8368.16Chaperone protein dnaK OS=Desulfatibacillum alkeni... [more]
DNAK_CLOTE1.528e-8369.64Chaperone protein dnaK OS=Clostridium tetani GN=dn... [more]

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Properties
Property NameValue
Genbank descriptionC34108D05EF PostHarvP1 Citrus clementina cDNA clone C34108D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931733 ID=FC931733; Name=FC931733; organism=Citrus clementina; type=EST; length=672bp
GGTCACAGTGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGG
ATGCTGGTCGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCT
ACTGCTGCTTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCAT
CCTAGTGTTTGACCTTGGTGGTGGTACTTTTGATGTTTCAGTCCTTGAGG
TCGGTGATGGAGTGTTTGAAGTGCTCTCCACCTCAGGCGATACGCATTTG
GGTGGTGATGATTTTGATAAGAGGATTGTTGATTGGCTTGCTTCAAACTT
CAAGAGAGATGAAGGCATAGATCTTTTGAAGGACAAACAAGCTCTTCAGC
GTCTAACTGAGACGGCTGAGGAGGCTAAGATGGAGCTGTCATCTTTGACT
CAAACAAACATCAGCTTGCCTTTCATTACTGCTACTGCAGATGGGCCGAA
GCATATTGACACCACCCTTACGAGGGTTAAGTTTGAGGAATTGTGTTCAG
ACCTACTGGACAGGCTCAAGACGCCTGTTGAAACTTCTTTGCGGGATGCA
AAACTTTCCTTCAAGGATCTTGATGAGGTTATTCTTGTTGGTGGATCAAC
ACGTATTCCAGCTGTTCAGGAGCTGGTGAAGAAGATGACTGGAAGGGAAA
CCAATGTTACAGTCAATCCTGA
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