FC931733

Overview
NameFC931733
Unique NameFC931733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11279 contig Ccv1_Contig11279:876..1547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_GEOTN (Chaperone protein dnaK OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.868e-81
Identity = 149/223 (66.82%), Postives = 185/223 (82.96%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAGRIAGL+V RIINEPTAA+LAYG +K  ++TILV+DLGGGTFDVS+LE+GDGVFEV +T+GD HLGGDDFD+ I+D+L S FK++ GIDL KDK ALQRL + AE+AK ELS +TQT ISLPFI+A  +GP H++TTLTR KFEEL + L++R   PV  +L+DA L+  D+D+VILVGGSTRIPAVQE +K+  G+E +  VNP
Sbjct:  114 ITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKGEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVSQFKQENGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLETTLTRAKFEELSAHLVERTMGPVRQALQDAGLTSADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNP 336          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPB (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain BS1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.868e-81
Identity = 149/224 (66.52%), Postives = 183/224 (81.70%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAG+IAGL+V RIINEPTAASL+YG + KN NE + VFDLGGGTFD+S+LE+GDGVFEV ST GDTHLGGDDFD++I+D+LA  FK+ EGIDL  D  ALQRL E AE+AK+ELSS T T I+LPFITAT +GPKH+   LTR KFE LCSDL D L  P + +++++KL   +++EV+LVGGSTRIP VQ LV+++ GRE N +VNP
Sbjct:  137 ITVPAYFNDAQRQATKDAGKIAGLEVKRIINEPTAASLSYGLDTKNENEKVAVFDLGGGTFDISILELGDGVFEVKSTDGDTHLGGDDFDQKIIDFLADEFKKQEGIDLRNDMMALQRLKEAAEKAKVELSSRTDTEINLPFITATQEGPKHLVVNLTRSKFEALCSDLFDSLIAPCKRAIKNSKLKTSEINEVVLVGGSTRIPKVQALVEELFGREPNRSVNP 360          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSL (Chaperone protein dnaK OS=Geobacter sulfurreducens GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.161e-81
Identity = 147/223 (65.92%), Postives = 185/223 (82.96%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK +E I VFDLGGGTFD+S+LE+GDGVFEV ST+GDT LGG+DFD+R++DW+A  FK+D+GIDL  DK ALQRL E AE+AK ELS+  +T+I+LPFITA A GPKH+   L+R K E LC+DLL++L+ P  T+L+DA LS  ++DEVILVGG TR+PAVQ+ V+++ G+  N  VNP
Sbjct:  140 ITVPAYFNDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKKDEKIAVFDLGGGTFDISILELGDGVFEVKSTNGDTFLGGEDFDQRVIDWIADEFKKDQGIDLRGDKMALQRLKEAAEKAKCELSTSMETDINLPFITADATGPKHLTMKLSRAKLEALCADLLNKLEGPCRTALKDAGLSPSEVDEVILVGGMTRMPAVQKRVQEIFGKVPNKGVNP 362          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_DEIPR (Chaperone protein dnaK (Fragment) OS=Deinococcus proteolyticus GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.161e-81
Identity = 151/225 (67.11%), Postives = 187/225 (83.11%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATAD--GPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYF++SQR ATK AG IAGL+VLR+INEPTAA+LAYG E+K +ETILVFDLGGGTFDV++LE+GDGVFEV STSGDT LGG DFD+RIVDWLA  F ++   DL KDKQALQRL E AE+AK+ELS+ ++T+ISLPFIT   +   P H++ TL+R KFEEL +DLL R++ PVE ++RDA +S  DL+EVILVGGSTRIPAV+ +VK +TG+E N +VNP
Sbjct:  126 ITVPAYFDNSQREATKQAGEIAGLNVLRVINEPTAAALAYGLERKGDETILVFDLGGGTFDVTILELGDGVFEVKSTSGDTSLGGADFDQRIVDWLAEEFNKEHNFDLRKDKQALQRLIEAAEKAKIELSNASETSISLPFITFDPETRTPLHLERTLSRAKFEELTADLLKRVRQPVEQAMRDAGVSSSDLNEVILVGGSTRIPAVKRIVKDLTGKEPNESVNP 350          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_BACST (Chaperone protein dnaK OS=Bacillus stearothermophilus GN=dnaK PE=2 SV=2)

HSP 1 Score: 300.827 bits (769), Expect = 4.161e-81
Identity = 147/223 (65.92%), Postives = 186/223 (83.41%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAGRIAGL+V RIINEPTAA+LAYG +K+ ++TILV+DLGGGTFDVS+LE+GDGVFEV +T+GD HLGGDDFD+ I+D+L   FK++ GIDL KDK ALQRL + AE+AK ELS +TQT ISLPFI+A  +GP H++TTLTR KFEEL + L++R   PV  +L+DA L+ +D+D++ILVGGSTRIPAVQE +K+  G+E +  VNP
Sbjct:  114 ITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVDQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLETTLTRAKFEELFAHLVERTMGPVRQALQDAGLTPEDIDKIILVGGSTRIPAVQEAIKRELGKEPHKGVNP 336          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_LEPIN (Chaperone protein dnaK OS=Leptospira interrogans GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 178/224 (79.46%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND QR ATKDAGRIAGL+V RIINEPTAA+LAYGF+KKN N  I V+DLGGGTFD+S+LE+ DGVFEV ST+GDTHLGGDDFD  I++W+ S FK   GID+  DK  +QRL E AE+AK+ELS    T I+LPFITA A GPKH+D TLTR KF++L   L+DR + P E +LRDA L   D++EVILVGGS RIPAVQELVK++ G+E N +VNP
Sbjct:  140 ITVPAYFNDEQRQATKDAGRIAGLEVERIINEPTAAALAYGFDKKNVNSKIAVYDLGGGTFDISILELADGVFEVKSTNGDTHLGGDDFDMAIMEWMISEFKNQTGIDISADKNTVQRLKEAAEKAKIELSGTMSTQINLPFITADASGPKHLDMTLTRAKFDQLTKSLVDRTRIPCENALRDAGLKASDINEVILVGGSIRIPAVQELVKQVFGKEPNKSVNP 363          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_LEPIC (Chaperone protein dnaK OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 178/224 (79.46%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND QR ATKDAGRIAGL+V RIINEPTAA+LAYGF+KKN N  I V+DLGGGTFD+S+LE+ DGVFEV ST+GDTHLGGDDFD  I++W+ S FK   GID+  DK  +QRL E AE+AK+ELS    T I+LPFITA A GPKH+D TLTR KF++L   L+DR + P E +LRDA L   D++EVILVGGS RIPAVQELVK++ G+E N +VNP
Sbjct:  140 ITVPAYFNDEQRQATKDAGRIAGLEVERIINEPTAAALAYGFDKKNVNSKIAVYDLGGGTFDISILELADGVFEVKSTNGDTHLGGDDFDMAIMEWMISEFKNQTGIDISADKNTVQRLKEAAEKAKIELSGTMSTQINLPFITADASGPKHLDMTLTRAKFDQLTKSLVDRTRIPCENALRDAGLKASDINEVILVGGSIRIPAVQELVKQVFGKEPNKSVNP 363          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSW (Chaperone protein dnaK OS=Geobacillus sp. (strain WCH70) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 148/223 (66.37%), Postives = 184/223 (82.51%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAGRIAGL+V RIINEPTAA+LAYG +K+ ++TILV+DLGGGTFDVS+LE+GDGVFEV +T+GD HLGGDDFD+ I+D+L   FK++ GIDL KDK ALQRL + AE+AK ELS +TQT ISLPFI+A   GP H++TTLTR KFEEL + L++R   PV  +L+DA L+  D+D+VILVGGSTRIPAVQE +K+  G+E +  VNP
Sbjct:  114 ITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVEQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANETGPLHLETTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPSDIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNP 336          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBM (Chaperone protein dnaK OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++ SL  +  +  D+D++I+VGGSTRIPAVQ+ VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIKKSLEGSGYAMSDIDKIIMVGGSTRIPAVQDAVKDFTGKELSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBL (Chaperone protein dnaK OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++ SL  +  +  D+D++I+VGGSTRIPAVQ+ VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIKKSLEGSGYAMSDIDKIIMVGGSTRIPAVQDAVKDFTGKELSKGVNP 339          
The following BLAST results are available for this feature:
BLAST of FC931733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_GEOTN1.868e-8166.82Chaperone protein dnaK OS=Geobacillus thermodenitr... [more]
DNAK_CHLPB1.868e-8166.52Chaperone protein dnaK OS=Chlorobium phaeobacteroi... [more]
DNAK_GEOSL4.161e-8165.92Chaperone protein dnaK OS=Geobacter sulfurreducens... [more]
DNAK_DEIPR4.161e-8167.11Chaperone protein dnaK (Fragment) OS=Deinococcus p... [more]
DNAK_BACST4.161e-8165.92Chaperone protein dnaK OS=Bacillus stearothermophi... [more]
DNAK_LEPIN5.434e-8166.52Chaperone protein dnaK OS=Leptospira interrogans G... [more]
DNAK_LEPIC5.434e-8166.52Chaperone protein dnaK OS=Leptospira interrogans s... [more]
DNAK_GEOSW5.434e-8166.37Chaperone protein dnaK OS=Geobacillus sp. (strain ... [more]
DNAK_CLOBM5.434e-8166.52Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBL5.434e-8166.52Chaperone protein dnaK OS=Clostridium botulinum (s... [more]

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Properties
Property NameValue
Genbank descriptionC34108D05EF PostHarvP1 Citrus clementina cDNA clone C34108D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931733 ID=FC931733; Name=FC931733; organism=Citrus clementina; type=EST; length=672bp
GGTCACAGTGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGG
ATGCTGGTCGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCT
ACTGCTGCTTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCAT
CCTAGTGTTTGACCTTGGTGGTGGTACTTTTGATGTTTCAGTCCTTGAGG
TCGGTGATGGAGTGTTTGAAGTGCTCTCCACCTCAGGCGATACGCATTTG
GGTGGTGATGATTTTGATAAGAGGATTGTTGATTGGCTTGCTTCAAACTT
CAAGAGAGATGAAGGCATAGATCTTTTGAAGGACAAACAAGCTCTTCAGC
GTCTAACTGAGACGGCTGAGGAGGCTAAGATGGAGCTGTCATCTTTGACT
CAAACAAACATCAGCTTGCCTTTCATTACTGCTACTGCAGATGGGCCGAA
GCATATTGACACCACCCTTACGAGGGTTAAGTTTGAGGAATTGTGTTCAG
ACCTACTGGACAGGCTCAAGACGCCTGTTGAAACTTCTTTGCGGGATGCA
AAACTTTCCTTCAAGGATCTTGATGAGGTTATTCTTGTTGGTGGATCAAC
ACGTATTCCAGCTGTTCAGGAGCTGGTGAAGAAGATGACTGGAAGGGAAA
CCAATGTTACAGTCAATCCTGA
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