FC931733

Overview
NameFC931733
Unique NameFC931733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBK (Chaperone protein dnaK OS=Clostridium botulinum (strain Okra / Type B1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++ SL  +  +  D+D++I+VGGSTRIPAVQ+ VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIKKSLEGSGYAMSDIDKIIMVGGSTRIPAVQDAVKDFTGKELSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBJ (Chaperone protein dnaK OS=Clostridium botulinum (strain Kyoto / Type A2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++ SL  +  +  D+D++I+VGGSTRIPAVQ+ VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIKKSLEGSGYAMSDIDKIIMVGGSTRIPAVQDAVKDFTGKELSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBH (Chaperone protein dnaK OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++ SL  +  +  D+D++I+VGGSTRIPAVQ+ VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIKKSLEGSGYAMSDIDKIIMVGGSTRIPAVQDAVKDFTGKELSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB6 (Chaperone protein dnaK OS=Clostridium botulinum (strain 657 / Type Ba4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++ SL  +  +  D+D++I+VGGSTRIPAVQ+ VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIKKSLEGSGYAMSDIDKIIMVGGSTRIPAVQDAVKDFTGKELSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB1 (Chaperone protein dnaK OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.434e-81
Identity = 149/224 (66.52%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTFDVS+LE+GDGVFEV +T+GDT LGGDDFD++++D++A  FK + GIDL  DK A+QRL E AE+AK+ELSS TQTNI+LPFITA A GPKHID  LTR KF EL  DL+ R   P++ SL  +  +  D+D++I+VGGSTRIPAVQ+ VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTFDVSILELGDGVFEVKATNGDTKLGGDDFDQKLIDYIAETFKAENGIDLRNDKMAIQRLKEAAEKAKIELSSATQTNINLPFITADATGPKHIDMNLTRAKFNELTHDLVQRTLEPIKKSLEGSGYAMSDIDKIIMVGGSTRIPAVQDAVKDFTGKELSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_TETHA (Chaperone protein dnaK OS=Tetragenococcus halophilus GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.097e-81
Identity = 148/224 (66.07%), Postives = 185/224 (82.59%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEK-KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+V RI+NEPTAA+LAYG +K + +E ILVFDLGGGTFDVS+LE+GDGVF+VLST+GD  LGGDDFD++I+D++ S FK++ GIDL KDK ALQRL + AE+AK +LS ++ T ISLPFITA  DGP H++  +TR KF+EL S L+DR K PV  +L+DA LS  D+D+VILVGGSTRIP+V E V+K TG+E N +VNP
Sbjct:  115 ITVPAYFNDSQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTEQDEKILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDEKIIDYMVSEFKKENGIDLSKDKMALQRLKDAAEKAKKDLSGVSSTQISLPFITAGEDGPLHLEMNMTRAKFDELTSSLVDRTKEPVRQALKDADLSQSDIDQVILVGGSTRIPSVVESVRKETGKEPNKSVNP 338          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_PELLD (Chaperone protein dnaK OS=Pelodictyon luteolum (strain DSM 273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.097e-81
Identity = 145/224 (64.73%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAGRIAGL+V RIINEPTAA+LAYG ++K  +E + VFDLGGGTFD+S+LE+GDGVFEV ST GDTHLGGDDFD++I+D+LA  FK+ EG+DL  D  ALQRL E  E+AK+ELSS T T I+LPFITAT +GPKH+   LTR KFE +CSDL D++  P   +++++K+  KD+DE++LVGGSTRIP VQ LVK+  G+E N +VNP
Sbjct:  137 ITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDRKQTSEKVAVFDLGGGTFDISILELGDGVFEVKSTDGDTHLGGDDFDQKIIDFLADEFKKQEGVDLRNDAIALQRLKEAGEKAKVELSSRTDTEINLPFITATPEGPKHLVINLTRAKFEGMCSDLFDKILEPCRRAVKNSKVEMKDIDEIVLVGGSTRIPKVQALVKEFFGKEPNRSVNP 360          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_DEIDV (Chaperone protein dnaK OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.097e-81
Identity = 149/225 (66.22%), Postives = 185/225 (82.22%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATAD--GPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYF++SQR ATK AG IAGL+VLR+INEPTAA+LAYG E+K NET+LVFDLGGGTFDV++LE+GDGVFEV ST+GDTHLGG DFD RIVDWLA  F R+   DL KDKQALQRL E AE+AK++LS+ ++++ISLPFIT   +   P H++ TL+R KFEEL +DLL R++ PVE +L DAKLS  D+DEVILVGGSTRIPAV+ +V+ + G+  N +VNP
Sbjct:  137 ITVPAYFDNSQREATKQAGEIAGLNVLRVINEPTAAALAYGLERKGNETVLVFDLGGGTFDVTILELGDGVFEVKSTAGDTHLGGADFDHRIVDWLAEEFNREHNFDLRKDKQALQRLIEAAEKAKIDLSNASESSISLPFITFDPETRTPMHLERTLSRAKFEELTADLLRRVRKPVEQALADAKLSASDIDEVILVGGSTRIPAVKRIVQDLVGKTPNESVNP 361          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOTH (Chaperone protein dnaK OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaK PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.097e-81
Identity = 146/223 (65.47%), Postives = 185/223 (82.96%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYF+DSQR ATKDAGRIAGL+VLRIINEPTAA+LAYG +K++++ ILVFDLGGGTFDVS+LE+GDGVFEVL+TSG+  LGGDDFD+RI+D+L   FK++ GIDL  DK A+QRL E AE+AK+ELS +T TNI+LPFITA A+GPKH+D TLTR KFEEL +DL+++   P   +L D+ L+   +D+++LVGGSTRIPAVQE V+K  G+E    +NP
Sbjct:  116 ITVPAYFSDSQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKESDQKILVFDLGGGTFDVSILEIGDGVFEVLATSGNNRLGGDDFDQRIIDYLIDLFKKEHGIDLSTDKMAMQRLKEAAEKAKIELSGVTTTNINLPFITADANGPKHLDVTLTRAKFEELTADLVEKTMEPTRRALEDSGLTPDKIDKILLVGGSTRIPAVQEAVRKFFGKEPFKGINP 338          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_BACTR (Chaperone protein dnaK OS=Bacillus thermoglucosidasius GN=dnaK PE=2 SV=3)

HSP 1 Score: 300.056 bits (767), Expect = 7.097e-81
Identity = 149/223 (66.82%), Postives = 183/223 (82.06%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAGRIAGL V RIINEPTAA+LAYG +K+ ++TILV+DLGGGTFDVS+LE+GDGVFEV +T+GD HLGGDDFD+ I+D+L   FK++ GIDL KDK ALQRL + AE+AK ELS +TQT ISLPFI+A   GP HI+TTLTR KFEEL + L++R   PV  +L+DA L+  D+D+VILVGGSTRIPAVQE +K+  G+E +  VNP
Sbjct:  111 ITVPAYFNDAQRQATKDAGRIAGLQVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVEQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANETGPLHIETTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNP 333          
The following BLAST results are available for this feature:
BLAST of FC931733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOBK5.434e-8166.52Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBJ5.434e-8166.52Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBH5.434e-8166.52Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOB65.434e-8166.52Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOB15.434e-8166.52Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_TETHA7.097e-8166.07Chaperone protein dnaK OS=Tetragenococcus halophil... [more]
DNAK_PELLD7.097e-8164.73Chaperone protein dnaK OS=Pelodictyon luteolum (st... [more]
DNAK_DEIDV7.097e-8166.22Chaperone protein dnaK OS=Deinococcus deserti (str... [more]
DNAK_CLOTH7.097e-8165.47Chaperone protein dnaK OS=Clostridium thermocellum... [more]
DNAK_BACTR7.097e-8166.82Chaperone protein dnaK OS=Bacillus thermoglucosida... [more]

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Properties
Property NameValue
Genbank descriptionC34108D05EF PostHarvP1 Citrus clementina cDNA clone C34108D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931733 ID=FC931733; Name=FC931733; organism=Citrus clementina; type=EST; length=672bp
GGTCACAGTGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGG
ATGCTGGTCGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCT
ACTGCTGCTTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCAT
CCTAGTGTTTGACCTTGGTGGTGGTACTTTTGATGTTTCAGTCCTTGAGG
TCGGTGATGGAGTGTTTGAAGTGCTCTCCACCTCAGGCGATACGCATTTG
GGTGGTGATGATTTTGATAAGAGGATTGTTGATTGGCTTGCTTCAAACTT
CAAGAGAGATGAAGGCATAGATCTTTTGAAGGACAAACAAGCTCTTCAGC
GTCTAACTGAGACGGCTGAGGAGGCTAAGATGGAGCTGTCATCTTTGACT
CAAACAAACATCAGCTTGCCTTTCATTACTGCTACTGCAGATGGGCCGAA
GCATATTGACACCACCCTTACGAGGGTTAAGTTTGAGGAATTGTGTTCAG
ACCTACTGGACAGGCTCAAGACGCCTGTTGAAACTTCTTTGCGGGATGCA
AAACTTTCCTTCAAGGATCTTGATGAGGTTATTCTTGTTGGTGGATCAAC
ACGTATTCCAGCTGTTCAGGAGCTGGTGAAGAAGATGACTGGAAGGGAAA
CCAATGTTACAGTCAATCCTGA
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