FC931733

Overview
NameFC931733
Unique NameFC931733
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB8 (Chaperone protein dnaK OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dnaK PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 2.697e-80
Identity = 149/224 (66.52%), Postives = 184/224 (82.14%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNN-ETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K ++   ILV+DLGGGTFDVS+L++GDGVFEVLST+GDT LGGDDFD++I+ ++A  FK   GIDL++DK A+QRL E +E+AK+ELS+  QTNI+LPFITA A GPKHID TL+R KF E+  DL++R   P+  +L DAKLS  D+D++ILVGGSTRIPAV E VK  TG+E +  VNP
Sbjct:  116 ITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKTDSAHKILVYDLGGGTFDVSILDLGDGVFEVLSTNGDTKLGGDDFDEKIMKYIADEFKASNGIDLMQDKMAVQRLKEASEKAKIELSASQQTNINLPFITADATGPKHIDLTLSRAKFNEITHDLVERSIEPMRKALADAKLSLNDIDKIILVGGSTRIPAVVEAVKNFTGKEPSKGVNP 339          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CHLT3 (Chaperone protein dnaK OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=dnaK PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 2.697e-80
Identity = 147/224 (65.62%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKK-NNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAG+IAGL+V RIINEPTAA+LAYG +KK +NE + VFDLGGGTFD+SVLE+GDGVFEV ST GDTHLGGD+FD+ ++D+LA  FK+ E IDL KD  ALQRL E AE+AK+ELSS   T ++LPFITAT DGPKH+   +TR KFE LC+ L DR+  P   ++++AKL  K++DEV+LVGGSTRIP VQ+LVK+  G+E N +VNP
Sbjct:  137 ITVPAYFNDAQRQATKDAGQIAGLEVKRIINEPTAAALAYGLDKKQSNEKVAVFDLGGGTFDISVLELGDGVFEVRSTDGDTHLGGDNFDQILIDFLADEFKKQEMIDLRKDPMALQRLKEAAEKAKIELSSSAATEVNLPFITATQDGPKHLVVNITRAKFEGLCASLFDRILEPCRRAVKNAKLDVKEIDEVVLVGGSTRIPKVQQLVKEFFGKEPNRSVNP 360          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_HELMI (Chaperone protein dnaK OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.522e-80
Identity = 142/223 (63.68%), Postives = 184/223 (82.51%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYF DSQR ATKDAG IAGL+V+RIINEPTAA+LAYG +K  ++TILV+DLGGGTFDVS+LE+GDG+FEV +TSG+  LGGDDFD++I++W+ + FK++ G+DL  DK A+QRL E AE+AK+ELS +  TNI+LPFITATADGP+H+D TLTR KF+EL +DL++    P   +L+DAKL  KD+D+VILVGGS+RIPAVQE ++K  G+E    +NP
Sbjct:  116 ITVPAYFTDSQRQATKDAGAIAGLEVMRIINEPTAAALAYGIDKGEDQTILVYDLGGGTFDVSILELGDGLFEVKATSGNNRLGGDDFDEKIINWMIAEFKKETGVDLRGDKMAMQRLKEAAEKAKIELSGVMSTNINLPFITATADGPQHLDMTLTRAKFDELTADLVEMTMGPTRQALQDAKLEPKDIDKVILVGGSSRIPAVQEAIRKYLGKEPFKGINP 338          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCV (Chaperone protein dnaK OS=Chlamydophila caviae GN=dnaK PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.522e-80
Identity = 145/223 (65.02%), Postives = 178/223 (79.82%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFNDSQR +TKDAGRIAGLDV RII EPTAA+LAYG +K  ++ I VFDLGGGTFD+S+LE+GDGVFEVLST+GDTHLGGDDFD+ I+ W+   FK+ EGIDL KD  ALQRL + AE+AK+ELS ++ T I+ PFIT  A GPKH+  TLTR  FE+L S LL+R K P + +L DAKLS  D+D+V+LVGG +R+PAVQE+VK + G+E N  VNP
Sbjct:  143 ITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDKAGDKKIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDEVIIKWMIEEFKKQEGIDLSKDNMALQRLKDAAEKAKIELSGVSSTEINQPFITMDASGPKHLTLTLTRAHFEKLASTLLERTKAPCQKALADAKLSASDIDDVLLVGGMSRMPAVQEVVKSIFGKEPNKGVNP 365          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSF (Chaperone protein dnaK OS=Geobacter sp. (strain FRC-32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 4.600e-80
Identity = 144/223 (64.57%), Postives = 183/223 (82.06%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYF+DSQR ATKDAG+IAGL+VLRIINEPTAA+LAYG +KK +E I VFDLGGGTFD+S+LE+G+GVFEV ST+GDT LGG+DFD+ ++DW+A  FK+D+GIDL  DK ALQRL E AE+AK ELSS  +T+I+LPFITA A GPKH++  LTR K E +C++L+D+L+ P  T+L+DA LS  D+DEVILVGG TR+P VQ+ V+ + G+  N  VNP
Sbjct:  140 ITVPAYFDDSQRQATKDAGKIAGLNVLRIINEPTAAALAYGLDKKKDEKIAVFDLGGGTFDISILELGEGVFEVKSTNGDTFLGGEDFDQNVIDWIADEFKKDQGIDLRNDKMALQRLKEAAEKAKCELSSSMETDINLPFITADASGPKHLNLKLTRAKLEAICANLIDKLEGPCRTALKDAGLSPSDIDEVILVGGMTRMPIVQKRVQDIFGKVPNRGVNP 362          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPC (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=dnaK PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.008e-80
Identity = 146/224 (65.18%), Postives = 187/224 (83.48%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAG+IAGL+V RI+NEPTAA+LAYG +K + +E ILVFDLGGGTFDVS+LE+GDGVF+VL+T+GD  LGGDDFD++I+D+L + FK++ GIDL +DK ALQRL + AE+AK +LS +TQT ISLPFITA + GP H++ +L+R KF++L  DL++R KTPV  +L DA+LS  ++DEVILVGGSTRIPAV E VK  TG+E N +VNP
Sbjct:  114 ITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGMDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAGSAGPLHLEMSLSRAKFDDLTRDLVERTKTPVRQALSDARLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNP 337          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_STRPB (Chaperone protein dnaK OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=dnaK PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.008e-80
Identity = 146/224 (65.18%), Postives = 187/224 (83.48%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAG+IAGL+V RI+NEPTAA+LAYG +K + +E ILVFDLGGGTFDVS+LE+GDGVF+VL+T+GD  LGGDDFD++I+D+L + FK++ GIDL +DK ALQRL + AE+AK +LS +TQT ISLPFITA + GP H++ +L+R KF++L  DL++R KTPV  +L DA+LS  ++DEVILVGGSTRIPAV E VK  TG+E N +VNP
Sbjct:  114 ITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGMDKTDKDEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVAEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAGSAGPLHLEMSLSRAKFDDLTRDLVERTKTPVRQALSDARLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNP 337          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_LISMO (Chaperone protein dnaK OS=Listeria monocytogenes GN=dnaK PE=2 SV=4)

HSP 1 Score: 296.975 bits (759), Expect = 6.008e-80
Identity = 148/224 (66.07%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEK-KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAG+IAGL+V RIINEPTAA+LAYG +K + ++TILVFDLGGGTFDVS+LE+GDGVFEV ST+GD  LGGDDFDK+I+D+L + FK+D GIDL +DK ALQRL + AE+AK +LS +T T ISLPFITA   GP H++ TLTR KF+EL  DL++R   P   +L+DA LS  D+D+VILVGGSTRIPAVQE +KK  G+E +  VNP
Sbjct:  114 ITVPAYFNDAQRQATKDAGKIAGLEVERIINEPTAAALAYGMDKTETDQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEVTLTRAKFDELTHDLVERTIAPTRQALKDANLSASDIDQVILVGGSTRIPAVQETIKKELGKEPHKGVNP 337          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_LISMH (Chaperone protein dnaK OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.008e-80
Identity = 148/224 (66.07%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEK-KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAG+IAGL+V RIINEPTAA+LAYG +K + ++TILVFDLGGGTFDVS+LE+GDGVFEV ST+GD  LGGDDFDK+I+D+L + FK+D GIDL +DK ALQRL + AE+AK +LS +T T ISLPFITA   GP H++ TLTR KF+EL  DL++R   P   +L+DA LS  D+D+VILVGGSTRIPAVQE +KK  G+E +  VNP
Sbjct:  114 ITVPAYFNDAQRQATKDAGKIAGLEVERIINEPTAAALAYGMDKTETDQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEVTLTRAKFDELTHDLVERTIAPTRQALKDANLSASDIDQVILVGGSTRIPAVQETIKKELGKEPHKGVNP 337          
BLAST of FC931733 vs. ExPASy Swiss-Prot
Match: DNAK_LISMF (Chaperone protein dnaK OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaK PE=2 SV=3)

HSP 1 Score: 296.975 bits (759), Expect = 6.008e-80
Identity = 148/224 (66.07%), Postives = 182/224 (81.25%), Query Frame = 2
Query:    2 VTVPAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEK-KNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKRDEGIDLLKDKQALQRLTETAEEAKMELSSLTQTNISLPFITATADGPKHIDTTLTRVKFEELCSDLLDRLKTPVETSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGRETNVTVNP 670
            +TVPAYFND+QR ATKDAG+IAGL+V RIINEPTAA+LAYG +K + ++TILVFDLGGGTFDVS+LE+GDGVFEV ST+GD  LGGDDFDK+I+D+L + FK+D GIDL +DK ALQRL + AE+AK +LS +T T ISLPFITA   GP H++ TLTR KF+EL  DL++R   P   +L+DA LS  D+D+VILVGGSTRIPAVQE +KK  G+E +  VNP
Sbjct:  114 ITVPAYFNDAQRQATKDAGKIAGLEVERIINEPTAAALAYGMDKTETDQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDNGIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEVTLTRAKFDELTHDLVERTIAPTRQALKDANLSASDIDQVILVGGSTRIPAVQETIKKELGKEPHKGVNP 337          
The following BLAST results are available for this feature:
BLAST of FC931733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOB82.697e-8066.52Chaperone protein dnaK OS=Clostridium beijerinckii... [more]
DNAK_CHLT32.697e-8065.63Chaperone protein dnaK OS=Chloroherpeton thalassiu... [more]
DNAK_HELMI3.522e-8063.68Chaperone protein dnaK OS=Heliobacterium modestica... [more]
DNAK_CHLCV3.522e-8065.02Chaperone protein dnaK OS=Chlamydophila caviae GN=... [more]
DNAK_GEOSF4.600e-8064.57Chaperone protein dnaK OS=Geobacter sp. (strain FR... [more]
DNAK_STRPC6.008e-8065.18Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_STRPB6.008e-8065.18Chaperone protein dnaK OS=Streptococcus pyogenes s... [more]
DNAK_LISMO6.008e-8066.07Chaperone protein dnaK OS=Listeria monocytogenes G... [more]
DNAK_LISMH6.008e-8066.07Chaperone protein dnaK OS=Listeria monocytogenes s... [more]
DNAK_LISMF6.008e-8066.07Chaperone protein dnaK OS=Listeria monocytogenes s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34108D05EF PostHarvP1 Citrus clementina cDNA clone C34108D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931733 ID=FC931733; Name=FC931733; organism=Citrus clementina; type=EST; length=672bp
GGTCACAGTGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGG
ATGCTGGTCGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCT
ACTGCTGCTTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCAT
CCTAGTGTTTGACCTTGGTGGTGGTACTTTTGATGTTTCAGTCCTTGAGG
TCGGTGATGGAGTGTTTGAAGTGCTCTCCACCTCAGGCGATACGCATTTG
GGTGGTGATGATTTTGATAAGAGGATTGTTGATTGGCTTGCTTCAAACTT
CAAGAGAGATGAAGGCATAGATCTTTTGAAGGACAAACAAGCTCTTCAGC
GTCTAACTGAGACGGCTGAGGAGGCTAAGATGGAGCTGTCATCTTTGACT
CAAACAAACATCAGCTTGCCTTTCATTACTGCTACTGCAGATGGGCCGAA
GCATATTGACACCACCCTTACGAGGGTTAAGTTTGAGGAATTGTGTTCAG
ACCTACTGGACAGGCTCAAGACGCCTGTTGAAACTTCTTTGCGGGATGCA
AAACTTTCCTTCAAGGATCTTGATGAGGTTATTCTTGTTGGTGGATCAAC
ACGTATTCCAGCTGTTCAGGAGCTGGTGAAGAAGATGACTGGAAGGGAAA
CCAATGTTACAGTCAATCCTGA
back to top