FC931735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.192e-18 Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQF-GQEEILCPLIADACIQV 667 +TND ATI+ LEV+HPAAK+LV + Q E+GDG + A E+L+ A +L+R +HP+ IISGY A+ ++ E + +I K +++SK G + L+ +A + V Sbjct: 57 ITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVEKL---GKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSV 182 HSP 2 Score: 35.039 bits (79), Expect = 8.192e-18 Identity = 13/30 (43.33%), Postives = 24/30 (80.00%), Query Frame = 1 Query: 181 KNIDACKQLSTITRTSLGPNGMNKMVINHL 270 +N+ AC+ +S I +TSLGP G++KM+++ + Sbjct: 23 QNVMACQAVSNIVKTSLGPVGLDKMLVDDI 52
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.194e-18 Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAIN 502 +TND AT++N L + HPAA +LV K+Q +E+GDG + AGE+L A+ L+ G+ P+ II G+ A N Sbjct: 60 ITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACN 132 HSP 2 Score: 40.0466 bits (92), Expect = 8.194e-18 Identity = 18/48 (37.50%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLD 273 +LKEG G + +++NI+AC+ + I +T+LGP GM+K++ D Sbjct: 11 LLKEGTDTAQGRSQ-IIRNINACQIIVDIVKTTLGPRGMDKLIYTERD 57
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.065e-17 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 505 +TND TI+ E++V+HPAAK+++ K Q E+GDG + AGE+L+ AEEL+ +HP+ I +GY A K Sbjct: 61 ITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEK 134 HSP 2 Score: 34.2686 bits (77), Expect = 1.065e-17 Identity = 18/47 (38.30%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHL 270 +L+EG + G D A NI A + ++ R++LGP GM+KM+++ L Sbjct: 11 ILREGTQRTVGRD-AQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSL 56
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.065e-17 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASK 610 +TND ATI+ +++VQH AKL+V K+Q EIGDG + AG +L+ AE+LI G+HP +I G+ A K S+ V N E ++ + ++ SK Sbjct: 71 ITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI----SDKFPVENRERLVETAQTSLGSK 175 HSP 2 Score: 35.8094 bits (81), Expect = 1.065e-17 Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = 1 Query: 103 SMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 S QP+ I +E K ++G+ EAV +I A + ++ RTSLGP G++KM+++ Sbjct: 13 SGQPF-IVMREQENQKRITGV-EAVKSHILAARAVANTLRTSLGPRGLDKMLVS 64
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.385e-17 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASK 610 VTND ATI++ ++V H AKL+V K+Q +EIGDG + AG +L+ AE+L+ G+HP I GY +A S +D+++TE +I K + SK Sbjct: 70 VTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAAR--VAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSK 176 HSP 2 Score: 35.039 bits (79), Expect = 1.385e-17 Identity = 15/32 (46.88%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 169 EAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 EA+ +I A K ++ RTSLGPNG++KM+++ Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVD 63
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.385e-17 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASK 610 VTND ATI++ ++V H AKL+V K+Q +EIGDG + AG +L+ AE+L+ G+HP I GY +A S +D+++TE +I K + SK Sbjct: 70 VTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAAR--VAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSK 176 HSP 2 Score: 35.039 bits (79), Expect = 1.385e-17 Identity = 15/32 (46.88%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 169 EAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 EA+ +I A K ++ RTSLGPNG++KM+++ Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVD 63
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.385e-17 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASK 610 VTND ATI++ ++V H AKL+V K+Q +EIGDG + AG +L+ AE+L+ G+HP I GY +A S +D+++TE +I K + SK Sbjct: 70 VTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAAR--VAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSK 176 HSP 2 Score: 35.039 bits (79), Expect = 1.385e-17 Identity = 15/32 (46.88%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 169 EAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 EA+ +I A K ++ RTSLGPNG++KM+++ Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVD 63
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.043e-17 Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKTPAT 688 +TND ATI+ +++V HP+AK+LV KAQ E GDG + AG +L L++ G+HP+ I + KA++K S+ + + + E ++ ++ SK Q +L P+ DA ++V AT Sbjct: 67 ITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAM----SQPVQLGDRETLLNSATTSLCSKVVSQYSSLLAPMSVDAVMRVIDPATAT 198 HSP 2 Score: 33.113 bits (74), Expect = 3.043e-17 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMV 258 NI A K ++ RTSLGP GM+KM+ Sbjct: 34 NISAAKAVADAVRTSLGPKGMDKMI 58
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.955e-17 Identity = 42/111 (37.84%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSEN--MDVRNTEEVIYRMKAAVASK 610 VTND ATI++ ++V H AKL+V K+Q +EIGDG + AG +L+ AE+L+ G+HP I GY +A S+N +D+ N E +I K + SK Sbjct: 70 VTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKI----SDNVLVDINNPEPLIQTAKTTLGSK 176 HSP 2 Score: 35.039 bits (79), Expect = 3.955e-17 Identity = 15/32 (46.88%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 169 EAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 EA+ +I A K ++ RTSLGPNG++KM+++ Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVD 63
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.958e-17 Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKTP 682 ++ND TI+ + V HPAAK+LV +Q GDG + AG +L A++L++ G+HPS I + KA + S+ +D+ + E +I ++ SK Q L P++ DA +Q KTP Sbjct: 57 ISNDGNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSIIAENFQKAAQRAAEVVMDM----SKPIDLSDRETLIRAASTSLNSKIVSQFSSTLAPMLVDAALQAAKKTP 186 HSP 2 Score: 32.3426 bits (72), Expect = 3.958e-17 Identity = 17/41 (41.46%), Postives = 23/41 (56.10%), Query Frame = 1 Query: 136 KEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMV 258 K G K+ E NI A + ++ RTSLGP GM+KM+ Sbjct: 8 KSGFKNKEKPLEVRKSNILAARAVADAIRTSLGPKGMDKMI 48 The following BLAST results are available for this feature:
BLAST of FC931735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931735 ID=FC931735; Name=FC931735; organism=Citrus clementina; type=EST; length=696bpback to top |