FC931735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 5.139e-17 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 +TND ATI++++++QHP KLLV K Q EE DG + AGE+ + AE+L+ +HP+ I+SGY KA Sbjct: 67 ITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKA 137 HSP 2 Score: 34.2686 bits (77), Expect = 5.139e-17 Identity = 18/47 (38.30%), Postives = 28/47 (59.57%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHL 270 +LKEG G EA+ NI A K + +++ GP GM+KM+++ L Sbjct: 17 ILKEGSSRTYG-KEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSL 62
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.140e-17 Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQE-EILCPLIADA 655 +TND ATI+ +LEVQHPAAK++V + Q +E+GDG + A E+L+ A ELI+ +HP+ II+G+ A + E + E +I K +++SK G E + ++ DA Sbjct: 54 ITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTYIKEHLAISVEEL---GREALINAAKTSMSSKLIGPESNLFSQIVVDA 175 HSP 2 Score: 29.261 bits (64), Expect = 5.140e-17 Identity = 10/27 (37.04%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMVIN 264 N+ A ++ I ++SLGP G++KM+++ Sbjct: 21 NVTAVMAIANIVKSSLGPQGLDKMLVD 47
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.685e-17 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 +TND ATI++++++QHP KLLV K Q EE DG + AGE+ + AE+L+ +HP+ I+SGY KA Sbjct: 67 ITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKA 137 HSP 2 Score: 33.4982 bits (75), Expect = 8.685e-17 Identity = 18/47 (38.30%), Postives = 27/47 (57.45%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHL 270 +LKEG G EA+ NI A K + +++ GP GM+KM ++ L Sbjct: 17 ILKEGSSRTYG-KEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSL 62
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 8.691e-17 Identity = 41/129 (31.78%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQEEI-LCPLIADACIQV 667 +TND ATI+ ++ V HPAAK+LV +AQ E GDG + AG +L+ E+L++MG+HP+ I + K K S +++ + E ++ ++ SK Q L P+ +A ++V Sbjct: 63 ITNDGATILKQMNVIHPAAKMLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAKAVDILTEM----STPIELTDRESLVKSASTSLNSKVVSQHSSQLAPIAVEAVLKV 187 HSP 2 Score: 34.6538 bits (78), Expect = 8.691e-17 Identity = 20/51 (39.22%), Postives = 28/51 (54.90%), Query Frame = 1 Query: 106 MQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMV 258 M+P G + +K S + NI+A K +S RTSLGP GM+KM+ Sbjct: 10 MKPQG------QAYKDKSKPADIRQSNINAAKAVSDAIRTSLGPRGMDKMI 54
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.129e-16 Identity = 39/109 (35.78%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASK 610 +TND ATI++ ++V H AKL+V K+Q +EIGDG + AG +L+ AE+L+ G+HP I GY +A +D+ N E +I K + SK Sbjct: 70 ITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAAR--IAIQHLDKISDKVLVDINNPEPLIQTAKTTLGSK 176 HSP 2 Score: 35.039 bits (79), Expect = 1.129e-16 Identity = 15/32 (46.88%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 169 EAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 EA+ +I A K ++ RTSLGPNG++KM+++ Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVD 63
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.908e-16 Identity = 43/136 (31.62%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKTPAT 688 +TND ATI+ +++V HPAA++LV KAQ E GDG + AG +L +L++ G+HP+ I + KA+ K S ++ + E ++ ++ SK Q +L P+ DA ++V AT Sbjct: 73 ITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDM----SRPEELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATAT 204 HSP 2 Score: 32.7278 bits (73), Expect = 1.908e-16 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMV 258 NI A K ++ RTSLGP GM+KM+ Sbjct: 40 NISAAKAVADAIRTSLGPKGMDKMI 64
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.909e-16 Identity = 32/71 (45.07%), Postives = 50/71 (70.42%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 +TND ATI+ +++++HPAA++LV + Q+EE+GDG GE+L AE+L+ LHP+ I+ GYT+A Sbjct: 61 ITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEA 131 HSP 2 Score: 31.187 bits (69), Expect = 1.909e-16 Identity = 18/45 (40.00%), Postives = 26/45 (57.78%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 +L EG G A NI A K ++ RT+LGP GM+KM+++ Sbjct: 11 ILAEGTNRTHGRS-AQDSNIRAGKAVAEAVRTTLGPRGMDKMLVD 54
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 72.7886 bits (177), Expect = 3.224e-16 Identity = 42/136 (30.88%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKTPAT 688 +TND ATI+ +++V HPAA++LV KAQ E GDG + AG +L +L++ G+HP+ I + KA+ K S +++ + E ++ ++ SK Q +L P+ +A ++V AT Sbjct: 70 ITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDM----SRPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATAT 201 HSP 2 Score: 32.7278 bits (73), Expect = 3.224e-16 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMV 258 NI A K ++ RTSLGP GM+KM+ Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.187e-16 Identity = 43/135 (31.85%), Postives = 72/135 (53.33%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQE---EILCPLIADACIQVCPKT 679 VTND TI+ E+++ +P A+++V + Q++E GDG ++ AGE+L+ AE+L+ +HP+ II GY A + + +DV ++ + R A + G E E+L +I DA QV +T Sbjct: 64 VTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAEQA------REEVDNVAVDVDPDDKDLIRSVAETSMTGKGAELDKELLSSIIYDAVNQVAVET 192 HSP 2 Score: 30.4166 bits (67), Expect = 4.187e-16 Identity = 11/29 (37.93%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMVINHL 270 NI A + ++ R++LGP GM+KM+++ + Sbjct: 31 NISAARAVADAVRSTLGPKGMDKMLVSSM 59
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 4.190e-16 Identity = 42/136 (30.88%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKTPAT 688 +TND ATI+ +++V HPAA++LV KAQ E GDG + AG +L +L++ G+HP+ I + KA+ K S +++ + E ++ ++ SK Q +L P+ +A ++V AT Sbjct: 70 ITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDM----SRPVELSDRETLLNSATTSLNSKVASQYSSLLSPMSVNAVMKVIDPATAT 201 HSP 2 Score: 32.7278 bits (73), Expect = 4.190e-16 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMV 258 NI A K ++ RTSLGP GM+KM+ Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61 The following BLAST results are available for this feature:
BLAST of FC931735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931735 ID=FC931735; Name=FC931735; organism=Citrus clementina; type=EST; length=696bpback to top |