FC931735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.441e-16 Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQE---EILCPLIADACIQV 667 VTND TI+ E+++ HPAA ++V + Q++E+GDG + AGE+L AE+L+ +H + I GY +A K +E D R T I AA A G E ++L L+ DA + V Sbjct: 63 VTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKAKEVLEDNAIEVTE--DDRETLTKI----AATAMTGKGAESAKDLLSELVVDAVLAV 187 HSP 2 Score: 33.8834 bits (76), Expect = 5.441e-16 Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 +L E + SG D A NI A K ++ RT+LGP GM+KM+++ Sbjct: 13 ILGEDSQRTSGQD-AQSMNITAGKAVAEAVRTTLGPKGMDKMLVD 56
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 5.445e-16 Identity = 42/136 (30.88%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKTPAT 688 +TND ATI+ +++V HPAA++LV KAQ E GDG + AG +L +L++ G+HP+ I + KA+ K S + + + E ++ ++ SK Q +L P+ +A ++V AT Sbjct: 70 ITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDM----SRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATAT 201 HSP 2 Score: 32.7278 bits (73), Expect = 5.445e-16 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMV 258 NI A K ++ RTSLGP GM+KM+ Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 5.445e-16 Identity = 42/136 (30.88%), Postives = 70/136 (51.47%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKTPAT 688 +TND ATI+ +++V HPAA++LV KAQ E GDG + AG +L +L++ G+HP+ I + KA+ K S + + + E ++ ++ SK Q +L P+ +A ++V AT Sbjct: 70 ITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDM----SRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATAT 201 HSP 2 Score: 32.7278 bits (73), Expect = 5.445e-16 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMV 258 NI A K ++ RTSLGP GM+KM+ Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMI 61
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPH_TETPY (T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.072e-16 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAI 499 ++ND ATI+N L++ HPAAK LV KAQ +E+GDG AGE+L+ ++ I G+HP + GY +A+ Sbjct: 57 ISNDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKNFIEEGMHPQIVTKGYKEAL 128 HSP 2 Score: 33.4982 bits (75), Expect = 7.072e-16 Identity = 15/43 (34.88%), Postives = 28/43 (65.12%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMV 258 +LK+G G + ++ NI+A + + I +T+LGP GM+K++ Sbjct: 8 LLKDGTDTSQGKAQ-IISNINAVQSIVEIVKTTLGPRGMDKLI 49
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.202e-16 Identity = 44/136 (32.35%), Postives = 69/136 (50.74%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQ-EEILCPLIADACIQVCPKTPAT 688 +TND ATI+ L V HPAAK+LV AQ E GDG + AG +L AE+L++ G+HP+ I + +A T + +++ + E ++ ++ SK Q +L P+ DA ++V AT Sbjct: 57 LTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT----VDCMKENALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVAT 188 HSP 2 Score: 33.113 bits (74), Expect = 9.202e-16 Identity = 15/30 (50.00%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 169 EAVLKNIDACKQLSTITRTSLGPNGMNKMV 258 E L NI A + ++ RTSLGP GM+KM+ Sbjct: 19 EVRLSNIMAARSVADAIRTSLGPKGMDKMI 48
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.017e-15 Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 505 VTND TI+ E++++HPAA ++V + Q+ E+GDG ++ +GE+L AE L+ +H + + GY +A K Sbjct: 62 VTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEK 135 HSP 2 Score: 34.2686 bits (77), Expect = 2.017e-15 Identity = 18/45 (40.00%), Postives = 29/45 (64.44%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 +L E + SG ++A NI A K ++ RT+LGP GM+KM+++ Sbjct: 12 VLSEDSQRTSG-EDAQSMNITAGKAVAESVRTTLGPKGMDKMLVD 55
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.623e-15 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 VTND ATI+ ++V + AKL+V K+Q +EIGDG + AG +L+ AE+LI G+HP I GY A Sbjct: 66 VTNDGATILENMQVDNQIAKLMVQLSKSQDDEIGDGTTGVVVLAGSLLEQAEQLIEKGIHPCRIYEGYETA 136 HSP 2 Score: 32.7278 bits (73), Expect = 2.623e-15 Identity = 15/32 (46.88%), Postives = 23/32 (71.88%), Query Frame = 1 Query: 169 EAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 EA +I A K +S I ++SLGP GM+KM+++ Sbjct: 28 EAHRSHILAAKTISNIMKSSLGPKGMDKMMVS 59
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPA_DROME (T-complex protein 1 subunit alpha OS=Drosophila melanogaster GN=T-cp1 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQE-EILCPLIADACIQV 667 VTND ATI+ LEV+HPAAK+LV + Q EE+GDG + A E+L+ A+EL++ +HP+ IISGY A + + +D + +I K +++SK G + E ++ DA V Sbjct: 57 VTNDGATILRLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVILAAELLKNADELVKQKIHPTSIISGYRIACKEACKYISEHL---TAPVDELGRDSLINIAKTSMSSKIIGADAEFFSAMVVDAAQSV 182
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 5.752e-15 Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 ++ND AT++ L++ HPAA+ LV K+Q E+GDG + AGE L+ A+ + G+HP II + A Sbjct: 61 ISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSA 131 HSP 2 Score: 37.7354 bits (86), Expect = 5.752e-15 Identity = 18/43 (41.86%), Postives = 28/43 (65.12%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMV 258 +LKEG GL + ++ NI+AC + RT+LGP GM+K++ Sbjct: 11 LLKEGTDTSQGLPQ-LISNINACCAIVDTVRTTLGPRGMDKLI 52
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.480e-15 Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEV--IYRMKAAVASKQFGQEEILCPLIADACIQVCPKTPAT 688 ++ND ATI+ LE++HPAAK+L KAQ E GDG AG +L +L+ G+HPS I + A+NK+ S ++ V T+ V + ++ SK Q L + DA + V PAT Sbjct: 64 ISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKSLEVLV------SMSVPVSLTDRVSLVKSATTSLNSKVVSQYTNLASIAVDAVLSVI--NPAT 192 HSP 2 Score: 32.3426 bits (72), Expect = 7.480e-15 Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMVIN 264 NI A + ++ RTSLGP GM+KM+I+ Sbjct: 31 NIVAARAVADAIRTSLGPKGMDKMIIS 57 The following BLAST results are available for this feature:
BLAST of FC931735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931735 ID=FC931735; Name=FC931735; organism=Citrus clementina; type=EST; length=696bpback to top |