FC931735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 46/132 (34.85%), Postives = 74/132 (56.06%), Query Frame = 2 Query: 275 NFFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQE-EILCPLIADACIQV 667 +F VTND ATI++ L+VQHPA K+LV + Q EIGDG + A E+L+ A EL++ +HP+ II+G+ A+ + S ++D E +I K +++SK G + + ++ DA + V Sbjct: 59 DFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVL---STSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAV 187
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 9.710e-15 Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A Sbjct: 58 ISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128 HSP 2 Score: 41.2022 bits (95), Expect = 9.710e-15 Identity = 19/49 (38.78%), Postives = 32/49 (65.31%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDK 276 +LKEG G+ + V NI+AC+ ++ RT+LGP GM+K++++ K Sbjct: 8 LLKEGTDTSQGIPQLV-SNINACQVIAEAVRTTLGPRGMDKLIVDDRGK 55
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 9.714e-15 Identity = 37/129 (28.68%), Postives = 59/129 (45.74%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQEEI-LCPLIADACIQV 667 ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A + V + + A++SK Q+++ ++ DA + + Sbjct: 58 ISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAKMVVDAVMML 186 HSP 2 Score: 40.817 bits (94), Expect = 9.714e-15 Identity = 18/45 (40.00%), Postives = 30/45 (66.67%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 +LKEG G+ + V NI AC+ ++ RT+LGP GM+K++++ Sbjct: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVD 51
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEEVIYRMKAAVASKQFGQE-EILCPLIADA 655 VTND ATI+ +LEV+HPA K+LV + Q EE+GDG + A E+L+ A+EL++ +HP+ II+GY A + S+++ + V+ K +++SK G + + L+ DA Sbjct: 58 VTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSI---GRQSVVNAAKTSMSSKIIGPDADFFGELVVDA 179
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.261e-14 Identity = 28/74 (37.84%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINK 505 +TND TI+ E+++ +P A+++V + Q++E GDG ++ AGE+L+ AE+L+ +HP+ II G+ A K Sbjct: 63 ITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEK 136 HSP 2 Score: 29.6462 bits (65), Expect = 1.261e-14 Identity = 11/29 (37.93%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMVINHL 270 NI A + ++ R++LGP GM+KM+++ + Sbjct: 30 NIRAARAVAEAVRSTLGPKGMDKMLVDSM 58
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.262e-14 Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A Sbjct: 58 ISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128 HSP 2 Score: 40.817 bits (94), Expect = 1.262e-14 Identity = 18/45 (40.00%), Postives = 30/45 (66.67%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 +LKEG G+ + V NI AC+ ++ RT+LGP GM+K++++ Sbjct: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVD 51
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 1.262e-14 Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A Sbjct: 58 ISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128 HSP 2 Score: 40.817 bits (94), Expect = 1.262e-14 Identity = 18/45 (40.00%), Postives = 30/45 (66.67%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 +LKEG G+ + V NI AC+ ++ RT+LGP GM+K++++ Sbjct: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVD 51
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.262e-14 Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 ++ND ATI+ L+V HPAAK LV K+Q E+GDG A E L+ + + GLHP II + A Sbjct: 58 ISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTA 128 HSP 2 Score: 40.817 bits (94), Expect = 1.262e-14 Identity = 18/45 (40.00%), Postives = 30/45 (66.67%), Query Frame = 1 Query: 130 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN 264 +LKEG G+ + V NI AC+ ++ RT+LGP GM+K++++ Sbjct: 8 LLKEGTDSSQGIPQLV-SNISACQVIAEAVRTTLGPRGMDKLIVD 51
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.640e-14 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKA 496 +TND ATI+N++ V HP AK+LV KAQ E GDG + AG +L A+ L+ G+HP+ I + A Sbjct: 69 ITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSA 139 HSP 2 Score: 31.9574 bits (71), Expect = 1.640e-14 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 184 NIDACKQLSTITRTSLGPNGMNKMV 258 NI A K ++ RTSLGP GM+KM+ Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMI 60
BLAST of FC931735 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14 Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 2 Query: 284 VTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTXXXXXXXXXXGSENMDVRNTEE-----VIYRMKAAVASKQFG-QEEILCPLIADACIQV 667 +TND ATI+ LEV+HPAAK+L Q +E+GDG + A E+L+ A+EL++ +HP+ +ISGY A + SEN+ + NT+E +I K +++SK G + L+ DA + + Sbjct: 54 ITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYI-------SENL-IINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAI 179 The following BLAST results are available for this feature:
BLAST of FC931735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931735 ID=FC931735; Name=FC931735; organism=Citrus clementina; type=EST; length=696bpback to top |