FC931737

Overview
NameFC931737
Unique NameFC931737
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.395e-30
Identity = 77/199 (38.69%), Postives = 104/199 (52.26%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCD---------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCG-TSLDHGVTAVGYGTEN-----GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIA 553
            +FST   VEG + I    L+SLSEQ LVDCD          + +EGCNGGL   A+ +II NGGI TE  YPY A  G+   +        I ++  +P N+       V+  P+++A +   + +Q Y  G+F   C   SLDHG+  VGY  +N        YWIVKNSWG+ WGE GYI + R         CG++
Sbjct:  144 SFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAAD--AVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRG-----KNTCGVS 335          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.128e-30
Identity = 80/170 (47.06%), Postives = 103/170 (60.59%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEA 493
            +FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY A DG    ++ +     I  Y++V    E +LQ A  N PVSVAI+    +FQLYESGI +   C  T LDHGV  VGYG+ +        +S GSS G++
Sbjct:  137 SFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNAPVSVAIDASNESFQLYESGIYYEPACSPTQLDHGVLVVGYGSGS-------SSSSGSSSGKS 299          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.969e-30
Identity = 77/187 (41.18%), Postives = 106/187 (56.68%), Query Frame = 2
Query:    5 FSTIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 535
            F ++AA+EG   I K    + + LSE+ LV C     N GCNGGL    +++II NG +  E DYPY   D +C T  K    +T   Y  VP N+E  L+ A++   V V+I+     FQLY+SG ++  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WG+ GYI M  E N  G  T
Sbjct:  114 FGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQNG-VAKESDYPYTGTDSTCKTNVKAFAKIT--GYNKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 297          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.969e-30
Identity = 71/186 (38.17%), Postives = 99/186 (53.23%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 559
            AF+T+A++E    I    LI+LSEQ+L+DCD   + GCNGGL+  A+E ++  GG+  E DYPY+  DG+C        V     Y  + + +EK         P+ VAI+   +    Y  GI         +H V  VGYG EN   YWI+KN+WG  WGE GY R+++N+       CGI  E
Sbjct:  139 AFATLASLESQFAIKHNQLINLSEQQLIDCDY-VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVN--YRRGIMRYCSNYGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNI-----NACGIRNE 316          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.102e-30
Identity = 76/187 (40.64%), Postives = 108/187 (57.75%), Query Frame = 2
Query:    5 FSTIAAVEG---INKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 535
            F ++AA+EG   I K    + + LSE+ +V C     N GCNGGL    +++II++G +  E DYPY   D +C T  K+   +T   Y  VP N+E  L+ A++   V V+I+     FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WG+ GYI M  E N  G  T
Sbjct:  121 FGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSFAKIT--GYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 304          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.552e-29
Identity = 70/186 (37.63%), Postives = 102/186 (54.84%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 559
            AF+T+A++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+   +    Y+ GI      + L+H V  VGYG EN   YW  KN+WG+ WGE G+ R+++N+       CG+  E
Sbjct:  138 AFATLASLESQFAIKHNQLINLSEQQMIDCDF-VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN--YKQGIIKYCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNI-----NACGMRNE 315          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.552e-29
Identity = 70/186 (37.63%), Postives = 102/186 (54.84%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 559
            AF+T+ ++E    I     I+LSEQ+L+DCD   + GC+GGL+  AFE +++ GGI  E DYPY+A +G C        V     Y  + + +EK      +  P+ VAI+   +    Y+ GI        L+H V  VGY  ENG  +WI+KN+WG+ WGE GY R+++N+       CGI  E
Sbjct:  139 AFATLGSLESQFAIKHNQFINLSEQQLIDCDF-VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVN--YKRGIMKYCANHGLNHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNI-----NACGIQNE 316          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.552e-29
Identity = 73/186 (39.25%), Postives = 103/186 (55.38%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 559
            AF+T+ ++E    I    LI+LSEQ+L+DCD   + GC+GGL+  A+E +++ GGI  E DYPY+A +G C        V     Y  V L +EK         P+ VAI+   +    Y+ GI        L+H V  VGYG ENG  +WI+KN+WG+ WGE GY R+++N+       CGI  E
Sbjct:  139 AFATLGSLESQFAIKHDQLINLSEQQLIDCDF-VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVG--YKRGIIRYCENHGLNHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNI-----NACGIKNE 316          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.552e-29
Identity = 81/190 (42.63%), Postives = 109/190 (57.37%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++ DNG +   +DYPY A DG+C T  K      +  + D+   DE  L +A+  + VSVA++     +Q Y SG+ + +C  +L+HGV  VG   +     W ++NSWGSSWGEAG+IR+    AG  T  CGI    S+
Sbjct:  137 AFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADNG-LAEAKDYPYTAKDGTCKTSVKRP-YTHVQGFTDIDSCDE--LAQAIQERTVSVAVDAN--PWQFYRSGVLS-KCTKNLNHGVVLVGVQADGA---WKIRNSWGSSWGEAGHIRL----AGGDT--CGICAAPSF 310          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.028e-29
Identity = 70/186 (37.63%), Postives = 102/186 (54.84%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 559
            AF+T+A++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE II  GG+  E DYPY+A + +C        V   D Y  + + +EK         P+ +AI+   +    Y+ GI      + L+H V  VGYG EN   YW  KN+WG+ WGE G+ R+++N+       CG+  E
Sbjct:  138 AFATLASLESQFAIKHNQLINLSEQQMIDCDF-VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN--YKQGIIKYCFNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNI-----NACGMRNE 315          
The following BLAST results are available for this feature:
BLAST of FC931737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
CYSP1_DICDI2.395e-3038.69Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CYSP4_DICDI3.128e-3047.06Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CPP3_ENTHI6.969e-3041.18Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATV_NPVHC6.969e-3038.17Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CPP2_ENTHI9.102e-3040.64Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATV_NPVRO1.552e-2937.63Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVCF1.552e-2937.63Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVAP1.552e-2939.25Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATL2_PARTE1.552e-2942.63Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATV_NPVAC2.028e-2937.63Viral cathepsin OS=Autographa californica nuclear ... [more]

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Properties
Property NameValue
Genbank descriptionC34108D09EF PostHarvP1 Citrus clementina cDNA clone C34108D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931737 ID=FC931737; Name=FC931737; organism=Citrus clementina; type=EST; length=748bp
GGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAG
GTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCA
TATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCAT
TATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCA
TTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATT
GATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGC
AGTTGCAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCAT
TCCAGTTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTG
GACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTA
CTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATA
TTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATT
GCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCC
TGGACCGTCCCCTCCATCTCCAACAAAGCCTCCTGCTGTGTGTGACAATT
ATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTCTTTGAAGTATGG
TACTCTTGCTTTGCATGGGGATGCTGCCCGCTTTGAGCTGCACCTGCT
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