FC931737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11 Identity = 62/201 (30.85%), Postives = 91/201 (45.27%), Query Frame = 2 Query: 8 STIAAVEGINKIVTGSLIS--LSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVV------TIDDYEDVPLND-------EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCG 547 ST A + IN G+ S LS Q ++DC + + C GG + +YA + GI E Y+A D CD + + TI +Y + D EK + + AN P+S I Y GI+T ++ +H ++ G+G N G +YWIV+NSWG WGE G++R+ V T G G Sbjct: 99 STSALADRINIKRKGAWPSTLLSVQNVIDCGNAGS--CEGGNDLPVWEYAHKH-----GIPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERMSN-YTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI---VTSTYKGGTG 288
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.462e-11 Identity = 59/193 (30.57%), Postives = 88/193 (45.60%), Query Frame = 2 Query: 65 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY---KAIDGSCDTYR-------------------KNAKVVTIDDYEDVPL----NDEKALQK-AVANQPVSVAIEGGGMAFQLYESGIFT------GRCGTSLDHGVTAV---GYGTENGAD-----YWIVKNSWGSSWGEAGYIRMERNV 520 LS Q L+ CDT + +GC GG +D A+ F + G+ ++ YP+ + D + T R N++V + D Y+ P+ +DEK + K + N PV +E F LY+ GI++ GR HG +V G+G E D YW NSWG WGE G+ R+ R + Sbjct: 253 LSPQNLLSCDTHHQKGCRGGRLDGAWWF-LRRRGVVSDNCYPFSGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTPVYRLASDEKEIMKELMENGPVQALME-VHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGI 443
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATZ_BOVIN (Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.462e-11 Identity = 55/184 (29.89%), Postives = 84/184 (45.65%), Query Frame = 2 Query: 8 STIAAVEGINKIVTGSLIS--LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR--------------KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM 508 ST A + IN G+ S LS Q ++DC + + C GG +E+ GI E Y+A D CD + KN + + DY + EK + + N P+S I Y GI++ + ++H V+ G+G +G +YWIV+NSWG WGE G++R+ Sbjct: 98 STSAMADRINIKRKGAWPSTLLSVQHVIDCGDAGS--CEGGNDLPVWEYA-HRHGIPDETCNNYQAKDQECDKFNQCGTCTEFKECHVIKNYTLWKVGDYGSLS-GREKMMAEIYTNGPISCGIMATEKMSN-YTGGIYSEYNDQAFINHIVSVAGWGVSDGMEYWIVRNSWGEPWGEHGWMRI 276 The following BLAST results are available for this feature:
BLAST of FC931737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931737 ID=FC931737; Name=FC931737; organism=Citrus clementina; type=EST; length=748bpback to top |