FC931737

Overview
NameFC931737
Unique NameFC931737
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATZ_RAT (Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-11
Identity = 62/201 (30.85%), Postives = 91/201 (45.27%), Query Frame = 2
Query:    8 STIAAVEGINKIVTGSLIS--LSEQELVDCDTSYNEGCNGG----LMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVV------TIDDYEDVPLND-------EKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTEN-GADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCG 547
            ST A  + IN    G+  S  LS Q ++DC  + +  C GG    + +YA +      GI  E    Y+A D  CD + +           TI +Y    + D       EK + +  AN P+S  I         Y  GI+T     ++ +H ++  G+G  N G +YWIV+NSWG  WGE G++R+   V  T  G  G
Sbjct:   99 STSALADRINIKRKGAWPSTLLSVQNVIDCGNAGS--CEGGNDLPVWEYAHKH-----GIPDETCNNYQAKDQECDKFNQCGTCTEFKECHTIQNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERMSN-YTGGIYTEYQNQAIINHIISVAGWGVSNDGIEYWIVRNSWGEPWGERGWMRI---VTSTYKGGTG 288          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: TINAL_RAT (Tubulointerstitial nephritis antigen-like OS=Rattus norvegicus GN=Tinagl1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.462e-11
Identity = 59/193 (30.57%), Postives = 88/193 (45.60%), Query Frame = 2
Query:   65 LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPY---KAIDGSCDTYR-------------------KNAKVVTIDDYEDVPL----NDEKALQK-AVANQPVSVAIEGGGMAFQLYESGIFT------GRCGTSLDHGVTAV---GYGTENGAD-----YWIVKNSWGSSWGEAGYIRMERNV 520
            LS Q L+ CDT + +GC GG +D A+ F +   G+ ++  YP+   +  D +  T R                    N++V + D Y+  P+    +DEK + K  + N PV   +E     F LY+ GI++      GR      HG  +V   G+G E   D     YW   NSWG  WGE G+ R+ R +
Sbjct:  253 LSPQNLLSCDTHHQKGCRGGRLDGAWWF-LRRRGVVSDNCYPFSGREQNDEASPTPRCMMHSRAMGRGKRQATSRCPNSQVDSNDIYQVTPVYRLASDEKEIMKELMENGPVQALME-VHEDFFLYQRGIYSHTPVSQGRPEQYRRHGTHSVKITGWGEETLPDGRTIKYWTAANSWGPWWGERGHFRIVRGI 443          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATZ_BOVIN (Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.462e-11
Identity = 55/184 (29.89%), Postives = 84/184 (45.65%), Query Frame = 2
Query:    8 STIAAVEGINKIVTGSLIS--LSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR--------------KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS-LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM 508
            ST A  + IN    G+  S  LS Q ++DC  + +  C GG     +E+     GI  E    Y+A D  CD +               KN  +  + DY  +    EK + +   N P+S  I         Y  GI++     + ++H V+  G+G  +G +YWIV+NSWG  WGE G++R+
Sbjct:   98 STSAMADRINIKRKGAWPSTLLSVQHVIDCGDAGS--CEGGNDLPVWEYA-HRHGIPDETCNNYQAKDQECDKFNQCGTCTEFKECHVIKNYTLWKVGDYGSLS-GREKMMAEIYTNGPISCGIMATEKMSN-YTGGIYSEYNDQAFINHIVSVAGWGVSDGMEYWIVRNSWGEPWGEHGWMRI 276          
The following BLAST results are available for this feature:
BLAST of FC931737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
CATZ_RAT5.547e-1130.85Cathepsin Z OS=Rattus norvegicus GN=Ctsz PE=1 SV=2[more]
TINAL_RAT9.462e-1130.57Tubulointerstitial nephritis antigen-like OS=Rattu... [more]
CATZ_BOVIN9.462e-1129.89Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34108D09EF PostHarvP1 Citrus clementina cDNA clone C34108D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931737 ID=FC931737; Name=FC931737; organism=Citrus clementina; type=EST; length=748bp
GGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAG
GTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCA
TATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCAT
TATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCA
TTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATT
GATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGC
AGTTGCAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCAT
TCCAGTTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTG
GACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTA
CTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATA
TTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATT
GCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCC
TGGACCGTCCCCTCCATCTCCAACAAAGCCTCCTGCTGTGTGTGACAATT
ATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTCTTTGAAGTATGG
TACTCTTGCTTTGCATGGGGATGCTGCCCGCTTTGAGCTGCACCTGCT
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