FC931737

Overview
NameFC931737
Unique NameFC931737
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.768e-41
Identity = 98/197 (49.75%), Postives = 120/197 (60.91%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG     TG LISLSEQ LVDC     NEGCNGGLMDYAF+++ DNGG+D+EE YPY+A + SC  Y     V     + D+P   EKAL KAVA   P+SVAI+ G  +F  Y+ GI F   C +  +DHGV  VGYG E    +   YW+VKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  140 AFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESC-KYNPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKD----RRNHCGIASAASY 330          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 2.309e-41
Identity = 97/197 (49.24%), Postives = 120/197 (60.91%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNGG+D+EE YPY A D +   Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  140 AFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.719e-41
Identity = 95/197 (48.22%), Postives = 120/197 (60.91%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG     TG L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGG+DTEE YPY   + +  TY+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N + +WIVKNSWG  WG  GY++M ++        CGI+  ASY
Sbjct:  140 AFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGISTAASY 331          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.775e-41
Identity = 96/196 (48.98%), Postives = 118/196 (60.20%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGY---GTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG     TG L+SLSEQ LVDC  +  NEGCNGGLMD AF ++ DNGG+D+EE YPY   D     Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI F   C +  LDHGV  VGY   GT++   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  140 AFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 330          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.553e-40
Identity = 96/197 (48.73%), Postives = 119/197 (60.41%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNG +D+EE YPY A D +   Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E    N   +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:  140 AFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKD----QNNHCGIATAASY 331          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.334e-40
Identity = 96/194 (49.48%), Postives = 120/194 (61.86%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE-NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG     TG L+SLSEQ LVD      N+GCNGGLMD AF++I +NGG+D+EE YPY+A D SC+ Y+          + D+P   EKAL KAVA   P+SVAI+ G  +FQ Y+SGI +   C +  LDHGV  VGYG E     +WIVKNSWG  WG  GY++M ++        CGIA  ASY
Sbjct:   27 AFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCN-YKPEYSAAKDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKD----QNNHCGIATAASY 214          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.334e-40
Identity = 97/197 (49.24%), Postives = 120/197 (60.91%), Query Frame = 2
Query:    5 FSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVA---IEGGGMAFQLYESGIFTG-RCGTSLD---HGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            FST  A+E      TG  ISLSEQ+LVDC   +N  GCNGGL   AFE+I  NGGIDTEE YPYK ++G C    +NA V  +D   ++ LN E  L+ AV   +PVSVA   I+G    F+ Y+SG++T   CGT+ D   H V AVGYG ENG  YW++KNSWG+ WG+ GY +ME          C IA  ASY
Sbjct:  171 FSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSV-NITLNAEDELKNAVGLVRPVSVAFQVIDG----FRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG-----KNMCAIATCASY 357          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.355e-40
Identity = 94/195 (48.21%), Postives = 121/195 (62.05%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY---NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGG-MAFQLYESGIFTG-RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG  K+ TG L+SLS Q LVDC T     N+GC GG M  AF++IID   ID+E  YPYKA+D  C  Y    +  T   Y ++P  DE+AL++AVA + PVSV I+     +F LY+SG++    C  +++HGV  VGYGT +G DYW+VKNSWG  +G+ GYIRM RN        CGIA   SY
Sbjct:  139 AFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYIIDTS-IDSEASYPYKAMDEKC-LYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARN----NKNHCGIASYCSY 327          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.688e-40
Identity = 95/197 (48.22%), Postives = 118/197 (59.90%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG     TG L+SLSEQ LVDC     N+GCNGG M  AF+++ +NGG+D+EE YPY A+D  C  YR    V     +  V    EKAL KAVA   P+SVA++ G  +FQ Y+SGI F   C + +LDHGV  VGYG E    N + YW+VKNSWG  WG  GY++    +A      CGIA  ASY
Sbjct:  140 AFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEIC-KYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVK----IAKDKNNHCGIATAASY 331          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.161e-39
Identity = 91/194 (46.91%), Postives = 120/194 (61.86%), Query Frame = 2
Query:    5 FSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            FST  ++E      TG  +SLSEQ+LVDC T+YN  GC+GGL   AFE+I  NGG+DTEE YPY  ++G C    +N  V  +D   ++ L  E  L+ AV   +PVSVA +     F++Y+SG++T   CGTS   ++H V AVGYG ENG  YW++KNSWG+ WG+ GY +ME          CGIA  ASY
Sbjct:  172 FSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSV-NITLGAEDELKNAVGLVRPVSVAFQVIN-GFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMG-----KNMCGIATCASY 358          
The following BLAST results are available for this feature:
BLAST of FC931737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
CATL1_HUMAN1.768e-4149.75Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATL1_BOVIN2.309e-4149.24Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATL1_PIG6.719e-4148.22Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_CANFA8.775e-4148.98Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL2_BOVIN2.553e-4048.73Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_SHEEP3.334e-4049.48Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
ALEU_HORVU3.334e-4049.24Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATS_RAT4.355e-4048.21Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATL2_HUMAN5.688e-4048.22Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
ORYC_ORYSJ2.161e-3946.91Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionC34108D09EF PostHarvP1 Citrus clementina cDNA clone C34108D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931737 ID=FC931737; Name=FC931737; organism=Citrus clementina; type=EST; length=748bp
GGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAG
GTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCA
TATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCAT
TATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCA
TTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATT
GATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGC
AGTTGCAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCAT
TCCAGTTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTG
GACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTA
CTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATA
TTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATT
GCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCC
TGGACCGTCCCCTCCATCTCCAACAAAGCCTCCTGCTGTGTGTGACAATT
ATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTCTTTGAAGTATGG
TACTCTTGCTTTGCATGGGGATGCTGCCCGCTTTGAGCTGCACCTGCT
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