FC931737

Overview
NameFC931737
Unique NameFC931737
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length748
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.959e-32
Identity = 80/197 (40.61%), Postives = 116/197 (58.88%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRC-GTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   ++EG     T  LI LSEQ L+DC  ++   GC+GG M YAF+++ DNGG+ TEE YPY+     C  + +N+    + D+  +P   E+AL KAVA   P+SVA++    +FQ Y SGI +  +C    L+H V  VGYG E    +G  +W+VKNSWG  WG  GY+++ ++     +  CGIA  ++Y
Sbjct:  140 AFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENS-AANVRDFVQIP-GSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKD----WSNHCGIATYSTY 330          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.559e-32
Identity = 76/193 (39.38%), Postives = 110/193 (56.99%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLDHGVTAVGYGTENGAD-------YWIVKNSWGSSWGEAGYIRM--ERNVAG 526
            +FST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  E+DYPY   DG      ++  V ++ ++  V +N+++     + N P++VAI    M  Q Y  G+     C   L+HGV  VGYG+   +        YWI+KNSWG SWGE G+ ++   RN+ G
Sbjct:  158 SFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYM--QTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICG 348          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.701e-32
Identity = 82/197 (41.62%), Postives = 113/197 (57.36%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRC-GTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   ++EG     TG L+ LSEQ L+DC  ++    C+GG M  AF+++ DNGG+ TEE YPY      C  + +N+    + D+  +P   E+AL KAVA   P+SVA++    +FQ Y+SGI +  +C    L+H V  VGYG E    +G  YW+VKNSWG  WG  GYI+    +A      CGIA  A+Y
Sbjct:  140 AFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENS-AANVRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIK----IAKDWNNHCGIATLATY 330          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 5.701e-32
Identity = 93/201 (46.27%), Postives = 115/201 (57.21%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDD--YEDVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGAD-----YWIVKN-SWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 568
            AFS   A+EG     TG LISL+EQ LVDC     NEGCNGG MD  F ++ +NGG+D+E  YPY   +G   T R N K    +D  + D+P + EK L KAVA   P+SVA     ++FQ Y+ GI F  RC    LDH +  VGY  E GAD     YW+VKN S G +WG  GYI+M ++        CGIA  ASY
Sbjct:   83 AFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPY---EGKVKTCRYNPKYSAANDTGFVDIP-SQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCDPEGLDHAMLLVGYSYE-GADSDNNKYWLVKNSSEGKNWGMDGYIKMAKD----RRNNCGIATAASY 274          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 7.446e-32
Identity = 80/199 (40.20%), Postives = 111/199 (55.78%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQK-AVANQPVSVAIEGGGMAFQLYESGI---FTGRCG-TSLDHGVTAVGYGTENGAD------YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEAS 565
            AFS    +EG+  + TG L   SEQEL+DCDT+ +  CNGGLMD A++ I D GG++ E +YPYKA    C  + +    V +  + D+P  +E A+Q+  +AN P+S+ I    M  Q Y  G+   +   C   +LDHGV  VGYG  +  +      YWIVKNSWG  WGE GY R+ R         CG++  A+
Sbjct:  420 AFSVTGNIEGLYAVKTGELKEFSEQELLDCDTT-DSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCH-FNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAM--QFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRG-----DNTCGVSEMAT 609          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.724e-32
Identity = 81/186 (43.55%), Postives = 105/186 (56.45%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 550
            AFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AFE II  GGI  E  YPY  +DG C   +   + V +       L  EK L++ +  + PVSVAI+   +    Y+SG+    C     L+HGV  VGYG EN   YW +KNSWGS WGE G+ R++R+V       CGI
Sbjct:  159 AFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC---KNTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTN--YKSGV-AKHCSVDHGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDV-----NSCGI 332          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.695e-31
Identity = 72/175 (41.14%), Postives = 102/175 (58.29%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGG--IDTEEDYPYKAIDGSCDTYRKNAKVV--TIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMER 514
            AFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD AF +I+++ G  + TE  YPY + +G     + N   +   I D+ D+P +++        N P+++A++    +F  Y  GI T      LDHGV  VGY   +   YWI+KNSW + WGE GYIR+E+
Sbjct:  152 AFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAE--SFMDYNGGILTSCTSKQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWGEDGYIRIEK 323          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.232e-31
Identity = 78/186 (41.94%), Postives = 104/186 (55.91%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 559
            AF+ I  +E    I+  SLI LSEQ+L+DCD   ++GC+GGLM  AF+ II  GG++ E DYPY+ I+ +C        V     Y+    ++ K L+    N P++VAI+   +    Y SGI T      L+H V  VGYG EN   YWI KNSWGS+WGE GY R  RN+       CG+  E
Sbjct:  152 AFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR-VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIID--YRSGIATVCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNI-----NACGMLNE 329          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.834e-30
Identity = 73/174 (41.95%), Postives = 100/174 (57.47%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVT-IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNV 520
            AF+T+A+VE    +    LI LSEQ+L+DCD S + GCNGGL+  AFE I+  GG+ TE DYP+   +  C   R    VV+ +  Y  V +N+EK      A  P+ +AI+   +    Y  G+ +      L+H V  VGYG ENG  YW+ KN+WG  WGE GY R+ +NV
Sbjct:  170 AFATLASVESQFAMRHNRLIDLSEQQLIDCD-SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVN--YYRGVISSCENNGLNHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNV 340          
BLAST of FC931737 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.395e-30
Identity = 74/199 (37.19%), Postives = 108/199 (54.27%), Query Frame = 2
Query:    2 AFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGR-CGTSLDHGVTAVGYGTENGA-------DYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 550
            +FS   A+EG + + TG L  LSEQ+ VDCD         S + GCNGGLM  AF ++   GG+++E+DYPY   DG C  + K+  V ++ ++  V +++ +     + + P+++ I    M  Q Y  G+     CG  LDHGV  VGYG    A        YWI+KNSWG +WGE GY ++ R     +  KCG+
Sbjct:  163 SFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKC-KFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYM--QTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICR--GSNVRNKCGV 356          
The following BLAST results are available for this feature:
BLAST of FC931737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
TEST2_RAT1.959e-3240.61Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
A494_ARATH2.559e-3239.38Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
TEST2_MOUSE5.701e-3241.62Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATL6_HUMAN5.701e-3246.27Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CPR1_DROME7.446e-3240.20Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATV_GVXN9.724e-3243.55Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CYSP_TRYBB3.695e-3141.14Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATV_NPVST8.232e-3141.94Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVLD1.834e-3041.95Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CYSP1_MAIZE2.395e-3037.19Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC34108D09EF PostHarvP1 Citrus clementina cDNA clone C34108D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931737 ID=FC931737; Name=FC931737; organism=Citrus clementina; type=EST; length=748bp
GGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAG
GTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCA
TATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCAT
TATTGATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCA
TTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATT
GATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGC
AGTTGCAAATCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCAT
TCCAGTTATATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTG
GACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTA
CTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATA
TTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATT
GCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCC
TGGACCGTCCCCTCCATCTCCAACAAAGCCTCCTGCTGTGTGTGACAATT
ATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTCTTTGAAGTATGG
TACTCTTGCTTTGCATGGGGATGCTGCCCGCTTTGAGCTGCACCTGCT
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