FC931741

Overview
NameFC931741
Unique NameFC931741
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length440
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS1_STRA3 (Ribose-phosphate pyrophosphokinase 1 OS=Streptococcus agalactiae serotype III GN=prs1 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.575e-41
Identity = 79/144 (54.86%), Postives = 108/144 (75.00%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARAR 432
            +DGEI V ++ES+RG  V+++Q T  P N+NLME+LIM+DA +RASA++++ V+PY+GYAR DRK + RE I +KLVAN++  AG DR+L  DLH+ Q  G+FDIPVDH+   P+I DY   +    +D+VVVSPD GGV RAR
Sbjct:   38 SDGEIQVNIEESIRGHHVFILQSTSSPVNDNLMEILIMVDALKRASAESVSVVMPYYGYARQDRKARSREPITSKLVANMLEVAGVDRLLTVDLHAAQIQGFFDIPVDHLMGAPLIADYFDRQGLVGDDVVVVSPDHGGVTRAR 181          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS1_LISMO (Ribose-phosphate pyrophosphokinase 1 OS=Listeria monocytogenes GN=prs1 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.575e-41
Identity = 83/144 (57.64%), Postives = 106/144 (73.61%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARAR 432
            +DGEI + ++ES+RGC VY++Q T  P N+NLMELLIMIDA +RASA  I  V+PY+GYAR DRK + RE I AKLVANLI  AGA R++  D+H+ Q  G+FDIP+DH+    ++ DY  S+    +DLVVVSPD GGV RAR
Sbjct:   42 SDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYF-SERHLGDDLVVVSPDHGGVTRAR 184          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS1_LISMF (Ribose-phosphate pyrophosphokinase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=prs1 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.575e-41
Identity = 83/144 (57.64%), Postives = 106/144 (73.61%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARAR 432
            +DGEI + ++ES+RGC VY++Q T  P N+NLMELLIMIDA +RASA  I  V+PY+GYAR DRK + RE I AKLVANLI  AGA R++  D+H+ Q  G+FDIP+DH+    ++ DY  S+    +DLVVVSPD GGV RAR
Sbjct:   42 SDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYF-SERHLGDDLVVVSPDHGGVTRAR 184          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS1_LISIN (Ribose-phosphate pyrophosphokinase 1 OS=Listeria innocua GN=prs1 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.575e-41
Identity = 83/144 (57.64%), Postives = 106/144 (73.61%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARAR 432
            +DGEI + ++ES+RGC VY++Q T  P N+NLMELLIMIDA +RASA  I  V+PY+GYAR DRK + RE I AKLVANLI  AGA R++  D+H+ Q  G+FDIP+DH+    ++ DY  S+    +DLVVVSPD GGV RAR
Sbjct:   42 SDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYF-SERHLGDDLVVVSPDHGGVTRAR 184          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_STAAC (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain COL) GN=prs PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 2.058e-41
Identity = 81/145 (55.86%), Postives = 106/145 (73.10%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLA-SKTXSSNDLVVVSPDVGGVARAR 432
            +DGEI + ++ES+RGCDV+++QPT  P N +LMELLIMIDAC+RASA  I  V+PY+GYAR DRK + R+ I AKLVANLI  AGA R++A DLH+ Q  G+FDIP+DH+   P++  +       +  + VVVSPD GGV RAR
Sbjct:   43 SDGEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAATINIVVPYYGYARQDRKARSRKPITAKLVANLIETAGATRMIALDLHAPQIQGFFDIPIDHLMGVPILAKHFKDDPNINPEECVVVSPDHGGVTRAR 187          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_PSEAE (Ribose-phosphate pyrophosphokinase OS=Pseudomonas aeruginosa GN=prs PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 2.058e-41
Identity = 82/146 (56.16%), Postives = 113/146 (77.40%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQ-GRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARA 435
            +DGEI V++ E+VRG DV+L+QPTC P N+NLMEL++M DA RR+SA  ITAVIPYFGYAR DR+ +  R +I+AK+VA+++T  G +RVL  DLH+ Q  G+FDIPVD++Y  PV++D +  +     +L++VSPD+GGV RARA
Sbjct:   36 SDGEISVEINENVRGKDVFLIQPTCAPTNDNLMELVVMADAFRRSSATRITAVIPYFGYARQDRRPRSARVAISAKVVADMLTVVGVNRVLTVDLHADQIQGFFDIPVDNIYGSPVLVDDIEDQRF--ENLMIVSPDIGGVVRARA 179          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_MYCGE (Ribose-phosphate pyrophosphokinase OS=Mycoplasma genitalium GN=prs PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 2.058e-41
Identity = 81/144 (56.25%), Postives = 108/144 (75.00%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARAR 432
            ADGE Y++  ESVR  D+Y+ Q TCP  N++LMELLI IDA +R SAK+ITA++PY+GYAR DRKT+GRE I +KL+A+++T+AGA+RV+  D+HS Q+ G+FDIPVD +    + L +   +     DLVVVSPD GGV RAR
Sbjct:   54 ADGETYIRFDESVRNKDIYIFQSTCPNVNDSLMELLIAIDALKRGSAKSITAILPYYGYARQDRKTKGREPITSKLIADMLTKAGANRVVLTDIHSDQTQGFFDIPVDSLRTYHIFL-FRVIELLGKKDLVVVSPDYGGVKRAR 196          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_PSESM (Ribose-phosphate pyrophosphokinase OS=Pseudomonas syringae pv. tomato GN=prs PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.687e-41
Identity = 81/146 (55.48%), Postives = 112/146 (76.71%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQ-GRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARA 435
            +DGEI  ++ E+VRG DV+++QPTC P N+NLMEL++M DA RR+SA  ITAVIPYFGYAR DR+ +  R +I+AK+VA+++T  G DRVL  DLH+ Q  G+FDIPVD++Y  PV++D +  +     +L++VSPD+GGV RARA
Sbjct:   36 SDGEISTEINENVRGKDVFIIQPTCAPTNDNLMELVVMADAFRRSSASRITAVIPYFGYARQDRRPRSARVAISAKVVADMLTVVGIDRVLTVDLHADQIQGFFDIPVDNIYGSPVLVDDIEDQRF--ENLMIVSPDIGGVVRARA 179          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_PSEPK (Ribose-phosphate pyrophosphokinase OS=Pseudomonas putida (strain KT2440) GN=prs PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.687e-41
Identity = 81/146 (55.48%), Postives = 112/146 (76.71%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQ-GRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARA 435
            +DGEI  ++ E+VRG DV+++QPTC P N+NLMEL++M DA RR+SA  ITAVIPYFGYAR DR+ +  R +I+AK+VA+++T  G DRVL  DLH+ Q  G+FDIPVD++Y  PV++D +  +     +L++VSPD+GGV RARA
Sbjct:   36 SDGEISTEINENVRGKDVFIIQPTCAPTNDNLMELVVMADAFRRSSASRITAVIPYFGYARQDRRPRSARVAISAKVVADMLTVVGIDRVLTVDLHADQIQGFFDIPVDNIYGSPVLVDDIEDQRF--ENLMIVSPDIGGVVRARA 179          
BLAST of FC931741 vs. ExPASy Swiss-Prot
Match: KPRS_VIBCH (Ribose-phosphate pyrophosphokinase OS=Vibrio cholerae GN=prs PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.510e-41
Identity = 83/146 (56.85%), Postives = 110/146 (75.34%), Query Frame = 1
Query:    1 ADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQ-GRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDIPVDHVYCQPVILDYLASKTXSSNDLVVVSPDVGGVARARA 435
            +DGE+ VQ+ E+VRG DV+++Q TC P N+NLMEL++MIDA RRASA  ITAVIPYFGYAR DR+ +  R  I AK+VA+ ++  G DRVL  DLH+ Q  G+FD+PVD+++  PV+L+ +  K  +  D VVVSPD+GGV RARA
Sbjct:   36 SDGEVAVQINENVRGSDVFIIQSTCAPTNDNLMELVVMIDAMRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSNVGVDRVLTIDLHAEQIQGFFDVPVDNIFGTPVLLEDM--KARNLEDPVVVSPDLGGVVRARA 179          
The following BLAST results are available for this feature:
BLAST of FC931741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
KPRS1_STRA31.575e-4154.86Ribose-phosphate pyrophosphokinase 1 OS=Streptococ... [more]
KPRS1_LISMO1.575e-4157.64Ribose-phosphate pyrophosphokinase 1 OS=Listeria m... [more]
KPRS1_LISMF1.575e-4157.64Ribose-phosphate pyrophosphokinase 1 OS=Listeria m... [more]
KPRS1_LISIN1.575e-4157.64Ribose-phosphate pyrophosphokinase 1 OS=Listeria i... [more]
KPRS_STAAC2.058e-4155.86Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_PSEAE2.058e-4156.16Ribose-phosphate pyrophosphokinase OS=Pseudomonas ... [more]
KPRS_MYCGE2.058e-4156.25Ribose-phosphate pyrophosphokinase OS=Mycoplasma g... [more]
KPRS_PSESM2.687e-4155.48Ribose-phosphate pyrophosphokinase OS=Pseudomonas ... [more]
KPRS_PSEPK2.687e-4155.48Ribose-phosphate pyrophosphokinase OS=Pseudomonas ... [more]
KPRS_VIBCH3.510e-4156.85Ribose-phosphate pyrophosphokinase OS=Vibrio chole... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34108E01EF PostHarvP1 Citrus clementina cDNA clone C34108E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931741 ID=FC931741; Name=FC931741; organism=Citrus clementina; type=EST; length=440bp
GCTGATGGTGAAATTTATGTTCAGCTGCAAGAGAGTGTTAGAGGATGTGA
TGTTTATTTGGTGCAGCCCACCTGTCCTCCGGCAAATGAAAATCTCATGG
AGCTTTTGATAATGATAGATGCGTGTCGGAGAGCGTCAGCCAAGAATATC
ACAGCTGTGATTCCTTACTTTGGATATGCTAGAGCTGACAGAAAGACTCA
AGGGCGAGAATCAATTGCTGCCAAACTCGTCGCAAACCTTATAACAGAGG
CAGGTGCTGACCGTGTTCTTGCTTGCGATCTTCACTCAGGGCAATCCATG
GGTTACTTTGATATTCCAGTGGACCATGTATACTGTCAGCCTGTGATTCT
TGATTACCTTGCTAGCAAGACGGNTTCTTCTAATGATTTGGTGGTGGTTT
CACCTGATGTCGGTGGAGTGGCAAGAGCACGTGCTTTTGC
back to top